RNA–Protein interactions for RNA: ENST00000242261.5

TWIST1-201, Transcript of twist family bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWIST1, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWIST1-201ENST00000242261 NISCHQ9Y2I1 1504 aa63.88■■■■■ 7.82
TWIST1-201ENST00000242261 CCDC180Q9P1Z9 1646 aa55.85■■■■■ 6.53
TWIST1-201ENST00000242261 ZCCHC6Q5VYS8 1495 aaKnown RBP53.65■■■■■ 6.18
TWIST1-201ENST00000242261 DCAF1Q9Y4B6 1507 aa52.87■■■■■ 6.05
TWIST1-201ENST00000242261 ABCC9O60706 1549 aa52.81■■■■■ 6.04
TWIST1-201ENST00000242261 DCAF8L2P0C7V8 631 aa52.79■■■■■ 6.04
TWIST1-201ENST00000242261 MYO15BQ96JP2 1530 aa52.29■■■■■ 5.96
TWIST1-201ENST00000242261 NACADO15069 1562 aa52.02■■■■■ 5.92
TWIST1-201ENST00000242261 SHROOM4Q9ULL8 1493 aa51.99■■■■■ 5.91
TWIST1-201ENST00000242261 RB1CC1Q8TDY2 1594 aa51.62■■■■■ 5.85
TWIST1-201ENST00000242261 SCRIBQ14160 1630 aa51.29■■■■■ 5.8
TWIST1-201ENST00000242261 UNC13AQ9UPW8 1703 aa50.48■■■■■ 5.67
TWIST1-201ENST00000242261 SUPT5HO00267 1087 aaKnown RBP50■■■■■ 5.59
TWIST1-201ENST00000242261 BICRAQ9NZM4 1560 aa49.94■■■■■ 5.58
TWIST1-201ENST00000242261 PABPN1Q86U42 306 aaKnown RBP eCLIP49.73■■■■■ 5.55
TWIST1-201ENST00000242261 CECR2Q9BXF3 1484 aa49.57■■■■■ 5.53
TWIST1-201ENST00000242261 RSF1Q96T23 1441 aaPredicted RBP49.48■■■■■ 5.51
TWIST1-201ENST00000242261 BAZ1AQ9NRL2 1556 aaPredicted RBP49.4■■■■■ 5.5
TWIST1-201ENST00000242261 MROH2BQ7Z745 1585 aa49.31■■■■■ 5.48
TWIST1-201ENST00000242261 SMARCA4P51532 1647 aa49.15■■■■■ 5.46
TWIST1-201ENST00000242261 WIZO95785 1651 aa48.93■■■■■ 5.42
TWIST1-201ENST00000242261 PEG3Q9GZU2 1588 aa48.55■■■■■ 5.36
TWIST1-201ENST00000242261 EIF4G1Q04637 1599 aaKnown RBP48.5■■■■■ 5.35
TWIST1-201ENST00000242261 TOP2AP11388 1531 aaKnown RBP48.48■■■■■ 5.35
TWIST1-201ENST00000242261 SMARCA2P51531 1590 aa48.4■■■■■ 5.34
TWIST1-201ENST00000242261 ATAD2BQ9ULI0 1458 aa48.34■■■■■ 5.33
TWIST1-201ENST00000242261 BAZ1BQ9UIG0 1483 aaKnown RBP48.12■■■■■ 5.29
TWIST1-201ENST00000242261 NCAPD3P42695 1498 aa47.95■■■■■ 5.27
TWIST1-201ENST00000242261 HMGXB3Q12766 1538 aa47.93■■■■■ 5.26
TWIST1-201ENST00000242261 CCDC88BA6NC98 1476 aa47.91■■■■■ 5.26
TWIST1-201ENST00000242261 CC2D2AQ9P2K1 1620 aa47.81■■■■■ 5.24
TWIST1-201ENST00000242261 CHIC1Q5VXU3 224 aa47.76■■■■■ 5.24
TWIST1-201ENST00000242261 TRIM41Q8WV44 630 aa47.07■■■■■ 5.13
TWIST1-201ENST00000242261 ABCC8Q09428 1581 aa46.87■■■■■ 5.09
TWIST1-201ENST00000242261 CFTRP13569 1480 aa46.86■■■■■ 5.09
TWIST1-201ENST00000242261 CADPSQ9ULU8 1353 aa46.72■■■■■ 5.07
TWIST1-201ENST00000242261 PRDM2Q13029 1718 aa46.71■■■■■ 5.07
TWIST1-201ENST00000242261 WRNQ14191 1432 aaPredicted RBP eCLIP46.64■■■■■ 5.06
TWIST1-201ENST00000242261 DNAJC5BQ9UF47 199 aa46.5■■■■■ 5.03
TWIST1-201ENST00000242261 SYNJ1O43426 1573 aa46.41■■■■■ 5.02
TWIST1-201ENST00000242261 LAMC3Q9Y6N6 1575 aa46.4■■■■■ 5.02
TWIST1-201ENST00000242261 NESP48681 1621 aa46.29■■■■■ 5
TWIST1-201ENST00000242261 TOP2BQ02880 1626 aa46.28■■■■■ 5
TWIST1-201ENST00000242261 BIVM-ERCC5R4GMW8 1640 aa46.24■■■■■ 4.99
TWIST1-201ENST00000242261 FANCD2Q9BXW9 1451 aa46.22■■■■■ 4.99
TWIST1-201ENST00000242261 FAM9AQ8IZU1 332 aaPredicted RBP46.14■■■■■ 4.98
TWIST1-201ENST00000242261 CUX1P39880 1505 aa46.13■■■■■ 4.98
TWIST1-201ENST00000242261 PDS5BQ9NTI5 1447 aa46.05■■■■■ 4.96
TWIST1-201ENST00000242261 EEA1Q15075 1411 aa45.99■■■■■ 4.95
TWIST1-201ENST00000242261 CEP164Q9UPV0 1460 aa45.98■■■■■ 4.95
TWIST1-201ENST00000242261 SOGA1O94964 1423 aa45.94■■■■■ 4.95
TWIST1-201ENST00000242261 LOC105371045A0A1W2PR82 267 aa45.89■■■■■ 4.94
TWIST1-201ENST00000242261 DNMBPQ6XZF7 1577 aa45.82■■■■■ 4.93
TWIST1-201ENST00000242261 KIF21AQ7Z4S6 1674 aa45.8■■■■■ 4.92
TWIST1-201ENST00000242261 RUSC2Q8N2Y8 1516 aa45.75■■■■■ 4.91
TWIST1-201ENST00000242261 TOPBP1Q92547 1522 aa45.71■■■■■ 4.91
TWIST1-201ENST00000242261 FGD5Q6ZNL6 1462 aa45.68■■■■■ 4.9
TWIST1-201ENST00000242261 CSRNP3Q8WYN3 585 aa45.66■■■■■ 4.9
TWIST1-201ENST00000242261 URB2Q14146 1524 aaKnown RBP45.61■■■■■ 4.89
TWIST1-201ENST00000242261 KIF27Q86VH2 1401 aa45.5■■■■■ 4.87
TWIST1-201ENST00000242261 EHMT2Q96KQ7 1210 aa45.47■■■■■ 4.87
TWIST1-201ENST00000242261 POLA1P09884 1462 aaPredicted RBP45.46■■■■■ 4.87
TWIST1-201ENST00000242261 MRC2Q9UBG0 1479 aa45.45■■■■■ 4.87
TWIST1-201ENST00000242261 ERCC6Q03468 1493 aa45.38■■■■■ 4.86
TWIST1-201ENST00000242261 CUX2O14529 1486 aa45.37■■■■■ 4.85
TWIST1-201ENST00000242261 KIF21BO75037 1637 aa45.36■■■■■ 4.85
TWIST1-201ENST00000242261 GOLGA3Q08378 1498 aa45.32■■■■■ 4.84
TWIST1-201ENST00000242261 ABCA10Q8WWZ4 1543 aa45.28■■■■■ 4.84
TWIST1-201ENST00000242261 RAD54L2Q9Y4B4 1467 aa45.28■■■■■ 4.84
TWIST1-201ENST00000242261 WDR62O43379 1518 aa45.2■■■■■ 4.83
TWIST1-201ENST00000242261 WDR97A6NE52 1622 aa45.15■■■■■ 4.82
TWIST1-201ENST00000242261 TNIKQ9UKE5 1360 aa45.11■■■■■ 4.81
TWIST1-201ENST00000242261 UBTFP17480 764 aaKnown RBP45.1■■■■■ 4.81
TWIST1-201ENST00000242261 PRXQ9BXM0 1461 aa45.1■■■■■ 4.81
TWIST1-201ENST00000242261 ERICH3Q5RHP9 1530 aa45.08■■■■■ 4.81
TWIST1-201ENST00000242261 THOC2Q8NI27 1593 aaKnown RBP45.07■■■■■ 4.81
TWIST1-201ENST00000242261 RAPGEF2Q9Y4G8 1499 aa45.05■■■■■ 4.8
TWIST1-201ENST00000242261 TARBP1Q13395 1621 aaKnown RBP45.01■■■■■ 4.8
TWIST1-201ENST00000242261 IGF1RP08069 1367 aa45.01■■■■■ 4.8
TWIST1-201ENST00000242261 ABCA5Q8WWZ7 1642 aa44.93■■■■■ 4.78
TWIST1-201ENST00000242261 IFT140Q96RY7 1462 aa44.89■■■■■ 4.78
TWIST1-201ENST00000242261 CEP162Q5TB80 1403 aa44.86■■■■■ 4.77
TWIST1-201ENST00000242261 TDRD9Q8NDG6 1382 aaKnown RBP44.86■■■■■ 4.77
TWIST1-201ENST00000242261 GAPVD1Q14C86 1478 aa44.84■■■■■ 4.77
TWIST1-201ENST00000242261 CARMIL1Q5VZK9 1371 aa44.83■■■■■ 4.77
TWIST1-201ENST00000242261 CUL7Q14999 1698 aa44.81■■■■■ 4.76
TWIST1-201ENST00000242261 PBRM1Q86U86 1689 aa44.63■■■■■ 4.74
TWIST1-201ENST00000242261 AQRO60306 1485 aaKnown RBP eCLIP44.58■■■■■ 4.73
TWIST1-201ENST00000242261 CLIP1P30622 1438 aa44.56■■■■■ 4.72
TWIST1-201ENST00000242261 ZNF608Q9ULD9 1512 aaPredicted RBP44.55■■■■■ 4.72
TWIST1-201ENST00000242261 GRIN2BQ13224 1484 aa44.53■■■■■ 4.72
TWIST1-201ENST00000242261 EIF4G3O43432 1585 aaKnown RBP44.48■■■■■ 4.71
TWIST1-201ENST00000242261 FHAD1B1AJZ9 1412 aa44.37■■■■■ 4.69
TWIST1-201ENST00000242261 ADAMTS12P58397 1594 aa44.37■■■■■ 4.69
TWIST1-201ENST00000242261 RANGAP1P46060 587 aaPredicted RBP44.35■■■■■ 4.69
TWIST1-201ENST00000242261 CTTNBP2Q8WZ74 1663 aa44.28■■■■■ 4.68
TWIST1-201ENST00000242261 SNAPC4Q5SXM2 1469 aa44.22■■■■■ 4.67
TWIST1-201ENST00000242261 MAGI1Q96QZ7 1491 aaPredicted RBP44.18■■■■■ 4.66
TWIST1-201ENST00000242261 VPS8Q8N3P4 1428 aa44.15■■■■■ 4.66
TWIST1-201ENST00000242261 ARHGAP35Q9NRY4 1499 aa44.1■■■■■ 4.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms