RNA–Protein interactions for RNA: ENST00000313324.8

FAM220A-201, Transcript of family with sequence similarity 220 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM220A, Length 2,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220A-201ENST00000313324 NISCHQ9Y2I1 1504 aa50.6■■■■■ 5.69
FAM220A-201ENST00000313324 CCDC180Q9P1Z9 1646 aa43.9■■■■■ 4.62
FAM220A-201ENST00000313324 ZCCHC6Q5VYS8 1495 aaKnown RBP42.46■■■■■ 4.39
FAM220A-201ENST00000313324 DCAF8L2P0C7V8 631 aa42.32■■■■■ 4.37
FAM220A-201ENST00000313324 ABCC9O60706 1549 aa42.08■■■■■ 4.33
FAM220A-201ENST00000313324 SHROOM4Q9ULL8 1493 aa41.75■■■■■ 4.27
FAM220A-201ENST00000313324 DCAF1Q9Y4B6 1507 aa41.57■■■■■ 4.25
FAM220A-201ENST00000313324 HRCP23327 699 aa41.42■■■■■ 4.22
FAM220A-201ENST00000313324 MYO15BQ96JP2 1530 aa41.03■■■■■ 4.16
FAM220A-201ENST00000313324 NACADO15069 1562 aa40.97■■■■■ 4.15
FAM220A-201ENST00000313324 SCRIBQ14160 1630 aa40.78■■■■■ 4.12
FAM220A-201ENST00000313324 RB1CC1Q8TDY2 1594 aa40.7■■■■■ 4.11
FAM220A-201ENST00000313324 PELP1Q8IZL8 1130 aaKnown RBP40.5■■■■■ 4.07
FAM220A-201ENST00000313324 PCGF6Q9BYE7 350 aa40.14■■■■■ 4.02
FAM220A-201ENST00000313324 SUPT5HO00267 1087 aaKnown RBP40.1■■■■■ 4.01
FAM220A-201ENST00000313324 PPARGC1BQ86YN6 1023 aaKnown RBP40.07■■■■■ 4
FAM220A-201ENST00000313324 UNC13AQ9UPW8 1703 aa40■■■■□ 3.99
FAM220A-201ENST00000313324 CHIC1Q5VXU3 224 aa39.93■■■■□ 3.98
FAM220A-201ENST00000313324 PABPN1Q86U42 306 aaKnown RBP eCLIP39.83■■■■□ 3.97
FAM220A-201ENST00000313324 BICRAQ9NZM4 1560 aa39.62■■■■□ 3.93
FAM220A-201ENST00000313324 CECR2Q9BXF3 1484 aa39.55■■■■□ 3.92
FAM220A-201ENST00000313324 RSF1Q96T23 1441 aaPredicted RBP39.34■■■■□ 3.89
FAM220A-201ENST00000313324 MROH2BQ7Z745 1585 aa39.24■■■■□ 3.87
FAM220A-201ENST00000313324 TRIM26Q12899 539 aaPredicted RBP39.18■■■■□ 3.86
FAM220A-201ENST00000313324 ZEB1P37275 1124 aaPredicted RBP39.13■■■■□ 3.85
FAM220A-201ENST00000313324 MYT1Q01538 1121 aa39.11■■■■□ 3.85
FAM220A-201ENST00000313324 SCAF1Q9H7N4 1312 aaKnown RBP39.08■■■■□ 3.85
FAM220A-201ENST00000313324 BAZ1AQ9NRL2 1556 aaPredicted RBP39■■■■□ 3.83
FAM220A-201ENST00000313324 WIZO95785 1651 aa38.92■■■■□ 3.82
FAM220A-201ENST00000313324 SMARCA4P51532 1647 aa38.9■■■■□ 3.82
FAM220A-201ENST00000313324 LOC105371045A0A1W2PR82 267 aa38.66■■■■□ 3.78
FAM220A-201ENST00000313324 EIF4G1Q04637 1599 aaKnown RBP38.41■■■■□ 3.74
FAM220A-201ENST00000313324 ATAD2BQ9ULI0 1458 aa38.33■■■■□ 3.73
FAM220A-201ENST00000313324 TOP2AP11388 1531 aaKnown RBP38.32■■■■□ 3.72
FAM220A-201ENST00000313324 PEG3Q9GZU2 1588 aa38.27■■■■□ 3.72
FAM220A-201ENST00000313324 ACIN1Q9UKV3 1341 aaKnown RBP38.23■■■■□ 3.71
FAM220A-201ENST00000313324 SMARCA2P51531 1590 aa38.15■■■■□ 3.7
FAM220A-201ENST00000313324 BAZ1BQ9UIG0 1483 aaKnown RBP38.11■■■■□ 3.69
FAM220A-201ENST00000313324 CCDC88BA6NC98 1476 aa38.09■■■■□ 3.69
FAM220A-201ENST00000313324 NEUROD1Q13562 356 aa37.94■■■■□ 3.66
FAM220A-201ENST00000313324 CC2D2AQ9P2K1 1620 aa37.92■■■■□ 3.66
FAM220A-201ENST00000313324 NCAPD3P42695 1498 aa37.9■■■■□ 3.66
FAM220A-201ENST00000313324 HMGXB3Q12766 1538 aa37.77■■■■□ 3.64
FAM220A-201ENST00000313324 CENPBP07199 599 aaPredicted RBP37.76■■■■□ 3.64
FAM220A-201ENST00000313324 GTF3C3Q9Y5Q9 886 aa37.73■■■■□ 3.63
FAM220A-201ENST00000313324 TRIM41Q8WV44 630 aa37.51■■■■□ 3.59
FAM220A-201ENST00000313324 DNAJC5BQ9UF47 199 aa37.43■■■■□ 3.58
FAM220A-201ENST00000313324 ABCC8Q09428 1581 aa37.4■■■■□ 3.58
FAM220A-201ENST00000313324 DIEXFQ68CQ4 756 aaKnown RBP37.4■■■■□ 3.58
FAM220A-201ENST00000313324 CCER1Q8TC90 406 aaPredicted RBP37.17■■■■□ 3.54
FAM220A-201ENST00000313324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.12■■■■□ 3.53
FAM220A-201ENST00000313324 FAM9AQ8IZU1 332 aaPredicted RBP37.1■■■■□ 3.53
FAM220A-201ENST00000313324 CFTRP13569 1480 aa37.1■■■■□ 3.53
FAM220A-201ENST00000313324 CADPSQ9ULU8 1353 aa37.03■■■■□ 3.52
FAM220A-201ENST00000313324 WRNQ14191 1432 aaPredicted RBP eCLIP37■■■■□ 3.51
FAM220A-201ENST00000313324 NESP48681 1621 aa36.95■■■■□ 3.51
FAM220A-201ENST00000313324 SYNJ1O43426 1573 aa36.9■■■■□ 3.5
FAM220A-201ENST00000313324 TTBK1Q5TCY1 1321 aaPredicted RBP36.83■■■■□ 3.49
FAM220A-201ENST00000313324 EHMT2Q96KQ7 1210 aa36.81■■■■□ 3.48
FAM220A-201ENST00000313324 ZNF316A6NFI3 1004 aaPredicted RBP36.75■■■■□ 3.47
FAM220A-201ENST00000313324 PRDM2Q13029 1718 aa36.71■■■■□ 3.47
FAM220A-201ENST00000313324 SOGA1O94964 1423 aa36.7■■■■□ 3.46
FAM220A-201ENST00000313324 FANCD2Q9BXW9 1451 aa36.66■■■■□ 3.46
FAM220A-201ENST00000313324 CUX1P39880 1505 aa36.66■■■■□ 3.46
FAM220A-201ENST00000313324 RUSC2Q8N2Y8 1516 aa36.62■■■■□ 3.45
FAM220A-201ENST00000313324 TOP2BQ02880 1626 aa36.6■■■■□ 3.45
FAM220A-201ENST00000313324 LAMC3Q9Y6N6 1575 aa36.58■■■■□ 3.45
FAM220A-201ENST00000313324 BIVM-ERCC5R4GMW8 1640 aa36.51■■■■□ 3.43
FAM220A-201ENST00000313324 CLSPNQ9HAW4 1339 aa36.49■■■■□ 3.43
FAM220A-201ENST00000313324 YTHDC1Q96MU7 727 aaKnown RBP36.4■■■■□ 3.42
FAM220A-201ENST00000313324 CEP164Q9UPV0 1460 aa36.38■■■■□ 3.41
FAM220A-201ENST00000313324 PDS5BQ9NTI5 1447 aa36.38■■■■□ 3.41
FAM220A-201ENST00000313324 MIER1Q8N108 512 aa36.34■■■■□ 3.41
FAM220A-201ENST00000313324 KIF21AQ7Z4S6 1674 aa36.33■■■■□ 3.41
FAM220A-201ENST00000313324 CSRNP3Q8WYN3 585 aa36.31■■■■□ 3.4
FAM220A-201ENST00000313324 FGD5Q6ZNL6 1462 aa36.26■■■■□ 3.39
FAM220A-201ENST00000313324 URB2Q14146 1524 aaKnown RBP36.24■■■■□ 3.39
FAM220A-201ENST00000313324 TOPBP1Q92547 1522 aa36.23■■■■□ 3.39
FAM220A-201ENST00000313324 EEA1Q15075 1411 aa36.2■■■■□ 3.39
FAM220A-201ENST00000313324 DNMBPQ6XZF7 1577 aa36.2■■■■□ 3.39
FAM220A-201ENST00000313324 ANP32EQ9BTT0 268 aa36.15■■■■□ 3.38
FAM220A-201ENST00000313324 RAD54L2Q9Y4B4 1467 aa36.11■■■■□ 3.37
FAM220A-201ENST00000313324 CEP162Q5TB80 1403 aa36.08■■■■□ 3.37
FAM220A-201ENST00000313324 POLA1P09884 1462 aaPredicted RBP36.08■■■■□ 3.37
FAM220A-201ENST00000313324 CUX2O14529 1486 aa36.05■■■■□ 3.36
FAM220A-201ENST00000313324 BCL11AQ9H165 835 aa36.03■■■■□ 3.36
FAM220A-201ENST00000313324 SUPT16HQ9Y5B9 1047 aaKnown RBP36.02■■■■□ 3.36
FAM220A-201ENST00000313324 KIF27Q86VH2 1401 aa36.01■■■■□ 3.35
FAM220A-201ENST00000313324 TNIKQ9UKE5 1360 aa35.98■■■■□ 3.35
FAM220A-201ENST00000313324 ERCC6Q03468 1493 aa35.98■■■■□ 3.35
FAM220A-201ENST00000313324 UBTFP17480 764 aaKnown RBP35.98■■■■□ 3.35
FAM220A-201ENST00000313324 MRC2Q9UBG0 1479 aa35.93■■■■□ 3.34
FAM220A-201ENST00000313324 TSHZ2Q9NRE2 1034 aa35.9■■■■□ 3.34
FAM220A-201ENST00000313324 RAPGEF2Q9Y4G8 1499 aa35.88■■■■□ 3.33
FAM220A-201ENST00000313324 GOLGA3Q08378 1498 aa35.87■■■■□ 3.33
FAM220A-201ENST00000313324 ABCA10Q8WWZ4 1543 aa35.81■■■■□ 3.32
FAM220A-201ENST00000313324 KIF21BO75037 1637 aa35.81■■■■□ 3.32
FAM220A-201ENST00000313324 IGF1RP08069 1367 aa35.8■■■■□ 3.32
FAM220A-201ENST00000313324 TDRD9Q8NDG6 1382 aaKnown RBP35.79■■■■□ 3.32
FAM220A-201ENST00000313324 PRXQ9BXM0 1461 aa35.75■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms