Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.68■□□□□ 0.74
NDUFA1O15239 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC19.66■□□□□ 0.74
NDUFA1O15239 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NDUFA1O15239 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
NDUFA1O15239 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NDUFA1O15239 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
NDUFA1O15239 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NDUFA1O15239 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDUFA1O15239 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NDUFA1O15239 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.6■□□□□ 0.73
NDUFA1O15239 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NDUFA1O15239 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NDUFA1O15239 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NDUFA1O15239 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NDUFA1O15239 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDUFA1O15239 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.55■□□□□ 0.72
NDUFA1O15239 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFA1O15239 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NDUFA1O15239 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFA1O15239 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFA1O15239 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFA1O15239 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFA1O15239 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NDUFA1O15239 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NDUFA1O15239 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDUFA1O15239 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDUFA1O15239 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NDUFA1O15239 AC145285.7-201ENST00000614819 1539 ntBASIC19.44■□□□□ 0.7
NDUFA1O15239 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NDUFA1O15239 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFA1O15239 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFA1O15239 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFA1O15239 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NDUFA1O15239 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFA1O15239 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
NDUFA1O15239 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.36■□□□□ 0.69
NDUFA1O15239 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDUFA1O15239 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NDUFA1O15239 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.33■□□□□ 0.68
NDUFA1O15239 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA1O15239 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NDUFA1O15239 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA1O15239 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA1O15239 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA1O15239 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA1O15239 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFA1O15239 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NDUFA1O15239 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFA1O15239 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFA1O15239 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFA1O15239 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFA1O15239 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFA1O15239 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFA1O15239 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFA1O15239 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.27■□□□□ 0.68
NDUFA1O15239 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.27■□□□□ 0.68
NDUFA1O15239 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NDUFA1O15239 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.26■□□□□ 0.67
NDUFA1O15239 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFA1O15239 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFA1O15239 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NDUFA1O15239 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFA1O15239 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFA1O15239 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFA1O15239 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFA1O15239 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFA1O15239 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.19■□□□□ 0.66
NDUFA1O15239 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFA1O15239 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NDUFA1O15239 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NDUFA1O15239 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFA1O15239 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFA1O15239 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFA1O15239 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NDUFA1O15239 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDUFA1O15239 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NDUFA1O15239 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NDUFA1O15239 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NDUFA1O15239 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NDUFA1O15239 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
NDUFA1O15239 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NDUFA1O15239 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.1■□□□□ 0.65
NDUFA1O15239 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NDUFA1O15239 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NDUFA1O15239 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NDUFA1O15239 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NDUFA1O15239 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NDUFA1O15239 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.08■□□□□ 0.64
NDUFA1O15239 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NDUFA1O15239 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NDUFA1O15239 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NDUFA1O15239 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDUFA1O15239 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDUFA1O15239 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NDUFA1O15239 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NDUFA1O15239 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NDUFA1O15239 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NDUFA1O15239 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.03■□□□□ 0.64
NDUFA1O15239 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NDUFA1O15239 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms