RNA–Protein interactions for RNA: ENST00000261369.8

SNX24-201, Transcript of sorting nexin 24, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX24, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX24-201ENST00000261369 NISCHQ9Y2I1 1504 aa53.17■■■■■ 6.1
SNX24-201ENST00000261369 SHROOM4Q9ULL8 1493 aa45.44■■■■■ 4.86
SNX24-201ENST00000261369 ZCCHC6Q5VYS8 1495 aaKnown RBP45.18■■■■■ 4.82
SNX24-201ENST00000261369 CCDC180Q9P1Z9 1646 aa45.09■■■■■ 4.81
SNX24-201ENST00000261369 SUPT5HO00267 1087 aaKnown RBP44.95■■■■■ 4.79
SNX24-201ENST00000261369 HRCP23327 699 aa44.36■■■■■ 4.69
SNX24-201ENST00000261369 CHIC1Q5VXU3 224 aa44.32■■■■■ 4.69
SNX24-201ENST00000261369 MYO15BQ96JP2 1530 aa44.31■■■■■ 4.68
SNX24-201ENST00000261369 DCAF1Q9Y4B6 1507 aa43.85■■■■■ 4.61
SNX24-201ENST00000261369 ABCC9O60706 1549 aa43.64■■■■■ 4.58
SNX24-201ENST00000261369 PCGF6Q9BYE7 350 aa43.56■■■■■ 4.56
SNX24-201ENST00000261369 DCAF8L2P0C7V8 631 aa43.32■■■■■ 4.53
SNX24-201ENST00000261369 PPARGC1BQ86YN6 1023 aaKnown RBP42.96■■■■■ 4.47
SNX24-201ENST00000261369 LOC105371045A0A1W2PR82 267 aa42.82■■■■■ 4.44
SNX24-201ENST00000261369 TRIM26Q12899 539 aaPredicted RBP42.8■■■■■ 4.44
SNX24-201ENST00000261369 ZEB1P37275 1124 aaPredicted RBP42.38■■■■■ 4.37
SNX24-201ENST00000261369 RSF1Q96T23 1441 aaPredicted RBP42.32■■■■■ 4.36
SNX24-201ENST00000261369 NACADO15069 1562 aa42.23■■■■■ 4.35
SNX24-201ENST00000261369 RB1CC1Q8TDY2 1594 aa42.09■■■■■ 4.33
SNX24-201ENST00000261369 SCRIBQ14160 1630 aa41.99■■■■■ 4.31
SNX24-201ENST00000261369 TRIM41Q8WV44 630 aa41.98■■■■■ 4.31
SNX24-201ENST00000261369 PELP1Q8IZL8 1130 aaKnown RBP41.72■■■■■ 4.27
SNX24-201ENST00000261369 FAM9AQ8IZU1 332 aaPredicted RBP41.42■■■■■ 4.22
SNX24-201ENST00000261369 UNC13AQ9UPW8 1703 aa41.34■■■■■ 4.21
SNX24-201ENST00000261369 MROH2BQ7Z745 1585 aa41.27■■■■■ 4.2
SNX24-201ENST00000261369 CECR2Q9BXF3 1484 aa41.25■■■■■ 4.19
SNX24-201ENST00000261369 SCAF1Q9H7N4 1312 aaKnown RBP41.22■■■■■ 4.19
SNX24-201ENST00000261369 PABPN1Q86U42 306 aaKnown RBP eCLIP41.13■■■■■ 4.17
SNX24-201ENST00000261369 BAZ1AQ9NRL2 1556 aaPredicted RBP41.07■■■■■ 4.17
SNX24-201ENST00000261369 EIF4G1Q04637 1599 aaKnown RBP41.07■■■■■ 4.16
SNX24-201ENST00000261369 WIZO95785 1651 aa41.06■■■■■ 4.16
SNX24-201ENST00000261369 BICRAQ9NZM4 1560 aa40.96■■■■■ 4.15
SNX24-201ENST00000261369 EHMT2Q96KQ7 1210 aa40.84■■■■■ 4.13
SNX24-201ENST00000261369 WRNQ14191 1432 aaPredicted RBP eCLIP40.81■■■■■ 4.12
SNX24-201ENST00000261369 CCER1Q8TC90 406 aaPredicted RBP40.72■■■■■ 4.11
SNX24-201ENST00000261369 ACIN1Q9UKV3 1341 aaKnown RBP40.69■■■■■ 4.1
SNX24-201ENST00000261369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.68■■■■■ 4.1
SNX24-201ENST00000261369 TOP2AP11388 1531 aaKnown RBP40.6■■■■■ 4.09
SNX24-201ENST00000261369 CEP162Q5TB80 1403 aa40.44■■■■■ 4.06
SNX24-201ENST00000261369 TNIKQ9UKE5 1360 aa40.43■■■■■ 4.06
SNX24-201ENST00000261369 NEUROD1Q13562 356 aa40.42■■■■■ 4.06
SNX24-201ENST00000261369 DIEXFQ68CQ4 756 aaKnown RBP40.42■■■■■ 4.06
SNX24-201ENST00000261369 EEA1Q15075 1411 aa40.41■■■■■ 4.06
SNX24-201ENST00000261369 CCDC88BA6NC98 1476 aa40.41■■■■■ 4.06
SNX24-201ENST00000261369 CENPBP07199 599 aaPredicted RBP40.4■■■■■ 4.06
SNX24-201ENST00000261369 ABCC8Q09428 1581 aa40.36■■■■■ 4.05
SNX24-201ENST00000261369 SMARCA2P51531 1590 aa40.34■■■■■ 4.05
SNX24-201ENST00000261369 SMARCA4P51532 1647 aa40.33■■■■■ 4.05
SNX24-201ENST00000261369 SOGA1O94964 1423 aa40.15■■■■■ 4.02
SNX24-201ENST00000261369 GTF3C3Q9Y5Q9 886 aa40.11■■■■■ 4.01
SNX24-201ENST00000261369 CSRNP3Q8WYN3 585 aa40.06■■■■■ 4
SNX24-201ENST00000261369 GOLGA3Q08378 1498 aa40.04■■■■■ 4
SNX24-201ENST00000261369 ZNF316A6NFI3 1004 aaPredicted RBP40■■■■□ 3.99
SNX24-201ENST00000261369 MYT1Q01538 1121 aa39.96■■■■□ 3.99
SNX24-201ENST00000261369 RUSC2Q8N2Y8 1516 aa39.86■■■■□ 3.97
SNX24-201ENST00000261369 UBTFP17480 764 aaKnown RBP39.82■■■■□ 3.96
SNX24-201ENST00000261369 TTBK1Q5TCY1 1321 aaPredicted RBP39.8■■■■□ 3.96
SNX24-201ENST00000261369 KIF21BO75037 1637 aa39.78■■■■□ 3.96
SNX24-201ENST00000261369 CEP164Q9UPV0 1460 aa39.75■■■■□ 3.95
SNX24-201ENST00000261369 PEG3Q9GZU2 1588 aa39.67■■■■□ 3.94
SNX24-201ENST00000261369 BAZ1BQ9UIG0 1483 aaKnown RBP39.56■■■■□ 3.92
SNX24-201ENST00000261369 VPS8Q8N3P4 1428 aa39.54■■■■□ 3.92
SNX24-201ENST00000261369 CLIP1P30622 1438 aa39.53■■■■□ 3.92
SNX24-201ENST00000261369 SYNJ1O43426 1573 aa39.48■■■■□ 3.91
SNX24-201ENST00000261369 CC2D2AQ9P2K1 1620 aa39.39■■■■□ 3.9
SNX24-201ENST00000261369 MIER1Q8N108 512 aa39.38■■■■□ 3.89
SNX24-201ENST00000261369 DNAJC5BQ9UF47 199 aa39.37■■■■□ 3.89
SNX24-201ENST00000261369 ATAD2BQ9ULI0 1458 aa39.33■■■■□ 3.89
SNX24-201ENST00000261369 HNRNPUL2Q1KMD3 747 aaKnown RBP39.32■■■■□ 3.89
SNX24-201ENST00000261369 CLSPNQ9HAW4 1339 aa39.29■■■■□ 3.88
SNX24-201ENST00000261369 YTHDC1Q96MU7 727 aaKnown RBP39.26■■■■□ 3.88
SNX24-201ENST00000261369 APLP2Q06481 763 aa39.21■■■■□ 3.87
SNX24-201ENST00000261369 RAPGEF2Q9Y4G8 1499 aa39.18■■■■□ 3.86
SNX24-201ENST00000261369 NCAPD3P42695 1498 aa39.05■■■■□ 3.84
SNX24-201ENST00000261369 TOP2BQ02880 1626 aa39.05■■■■□ 3.84
SNX24-201ENST00000261369 ERICH3Q5RHP9 1530 aa39.02■■■■□ 3.84
SNX24-201ENST00000261369 DHX57Q6P158 1386 aaKnown RBP38.95■■■■□ 3.83
SNX24-201ENST00000261369 BIVM-ERCC5R4GMW8 1640 aa38.93■■■■□ 3.82
SNX24-201ENST00000261369 PRXQ9BXM0 1461 aa38.87■■■■□ 3.81
SNX24-201ENST00000261369 HMGXB3Q12766 1538 aa38.86■■■■□ 3.81
SNX24-201ENST00000261369 ARAP1Q96P48 1450 aa38.83■■■■□ 3.81
SNX24-201ENST00000261369 CUX2O14529 1486 aa38.79■■■■□ 3.8
SNX24-201ENST00000261369 RRBP1Q9P2E9 1410 aaKnown RBP38.79■■■■□ 3.8
SNX24-201ENST00000261369 SUPT16HQ9Y5B9 1047 aaKnown RBP38.54■■■■□ 3.76
SNX24-201ENST00000261369 KANK4Q5T7N3 995 aaPredicted RBP38.54■■■■□ 3.76
SNX24-201ENST00000261369 RANGAP1P46060 587 aaPredicted RBP38.53■■■■□ 3.76
SNX24-201ENST00000261369 CCNB3Q8WWL7 1395 aa38.47■■■■□ 3.75
SNX24-201ENST00000261369 KIF27Q86VH2 1401 aa38.46■■■■□ 3.75
SNX24-201ENST00000261369 CUX1P39880 1505 aa38.4■■■■□ 3.74
SNX24-201ENST00000261369 ARHGAP35Q9NRY4 1499 aa38.35■■■■□ 3.73
SNX24-201ENST00000261369 MAP3K1Q13233 1512 aa38.33■■■■□ 3.73
SNX24-201ENST00000261369 MAPKBP1O60336 1514 aa38.22■■■■□ 3.71
SNX24-201ENST00000261369 RAB3GAP2Q9H2M9 1393 aa38.16■■■■□ 3.7
SNX24-201ENST00000261369 CFTRP13569 1480 aa38.15■■■■□ 3.7
SNX24-201ENST00000261369 TIAM1Q13009 1591 aa38.14■■■■□ 3.7
SNX24-201ENST00000261369 NESP48681 1621 aa38.13■■■■□ 3.69
SNX24-201ENST00000261369 TSHZ2Q9NRE2 1034 aa38.11■■■■□ 3.69
SNX24-201ENST00000261369 SETD5Q9C0A6 1442 aa38.06■■■■□ 3.68
SNX24-201ENST00000261369 CADPSQ9ULU8 1353 aa38.06■■■■□ 3.68
SNX24-201ENST00000261369 TIMELESSQ9UNS1 1208 aa37.98■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms