Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDUFA1O15239 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
NDUFA1O15239 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.67■■□□□ 1.22
NDUFA1O15239 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFA1O15239 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NDUFA1O15239 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
NDUFA1O15239 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.06■■□□□ 1.12
NDUFA1O15239 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDUFA1O15239 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
NDUFA1O15239 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.77■■□□□ 1.08
NDUFA1O15239 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDUFA1O15239 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.76■■□□□ 1.07
NDUFA1O15239 AL356512.1-201ENST00000607453 1739 ntBASIC21.69■■□□□ 1.06
NDUFA1O15239 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.64■■□□□ 1.05
NDUFA1O15239 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NDUFA1O15239 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NDUFA1O15239 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
NDUFA1O15239 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC21.5■■□□□ 1.03
NDUFA1O15239 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NDUFA1O15239 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NDUFA1O15239 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NDUFA1O15239 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFA1O15239 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFA1O15239 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDUFA1O15239 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFA1O15239 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFA1O15239 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
NDUFA1O15239 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFA1O15239 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFA1O15239 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDUFA1O15239 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NDUFA1O15239 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFA1O15239 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA1O15239 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA1O15239 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA1O15239 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA1O15239 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFA1O15239 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC20.67■□□□□ 0.9
NDUFA1O15239 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NDUFA1O15239 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFA1O15239 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
NDUFA1O15239 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDUFA1O15239 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFA1O15239 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
NDUFA1O15239 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.37■□□□□ 0.85
NDUFA1O15239 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFA1O15239 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFA1O15239 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NDUFA1O15239 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.23■□□□□ 0.83
NDUFA1O15239 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFA1O15239 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFA1O15239 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFA1O15239 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NDUFA1O15239 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFA1O15239 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
NDUFA1O15239 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.15■□□□□ 0.82
NDUFA1O15239 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
NDUFA1O15239 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
NDUFA1O15239 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA1O15239 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA1O15239 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NDUFA1O15239 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFA1O15239 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFA1O15239 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NDUFA1O15239 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.07■□□□□ 0.8
NDUFA1O15239 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFA1O15239 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFA1O15239 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFA1O15239 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFA1O15239 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20■□□□□ 0.79
NDUFA1O15239 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.98■□□□□ 0.79
NDUFA1O15239 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NDUFA1O15239 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDUFA1O15239 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.93■□□□□ 0.78
NDUFA1O15239 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NDUFA1O15239 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.92■□□□□ 0.78
NDUFA1O15239 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NDUFA1O15239 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.9■□□□□ 0.78
NDUFA1O15239 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.9■□□□□ 0.78
NDUFA1O15239 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDUFA1O15239 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDUFA1O15239 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDUFA1O15239 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDUFA1O15239 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.83■□□□□ 0.76
NDUFA1O15239 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFA1O15239 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFA1O15239 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFA1O15239 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.79■□□□□ 0.76
NDUFA1O15239 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFA1O15239 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NDUFA1O15239 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
NDUFA1O15239 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFA1O15239 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFA1O15239 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NDUFA1O15239 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.76■□□□□ 0.75
NDUFA1O15239 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFA1O15239 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFA1O15239 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NDUFA1O15239 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFA1O15239 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms