Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NDUFA1O15239 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
NDUFA1O15239 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.67■■□□□ 1.22
NDUFA1O15239 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NDUFA1O15239 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NDUFA1O15239 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
NDUFA1O15239 HES6-203ENST00000409160 1600 ntTSL 2 BASIC22.06■■□□□ 1.12
NDUFA1O15239 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NDUFA1O15239 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
NDUFA1O15239 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.77■■□□□ 1.08
NDUFA1O15239 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDUFA1O15239 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.76■■□□□ 1.07
NDUFA1O15239 AL356512.1-201ENST00000607453 1739 ntBASIC21.69■■□□□ 1.06
NDUFA1O15239 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.64■■□□□ 1.05
NDUFA1O15239 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NDUFA1O15239 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NDUFA1O15239 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
NDUFA1O15239 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC21.5■■□□□ 1.03
NDUFA1O15239 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NDUFA1O15239 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NDUFA1O15239 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NDUFA1O15239 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NDUFA1O15239 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NDUFA1O15239 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDUFA1O15239 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFA1O15239 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFA1O15239 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
NDUFA1O15239 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDUFA1O15239 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFA1O15239 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDUFA1O15239 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NDUFA1O15239 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NDUFA1O15239 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA1O15239 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFA1O15239 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA1O15239 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFA1O15239 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFA1O15239 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC20.67■□□□□ 0.9
NDUFA1O15239 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NDUFA1O15239 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NDUFA1O15239 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
NDUFA1O15239 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDUFA1O15239 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFA1O15239 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
NDUFA1O15239 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.37■□□□□ 0.85
NDUFA1O15239 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFA1O15239 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFA1O15239 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NDUFA1O15239 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.23■□□□□ 0.83
NDUFA1O15239 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFA1O15239 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFA1O15239 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFA1O15239 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NDUFA1O15239 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFA1O15239 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
NDUFA1O15239 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.15■□□□□ 0.82
NDUFA1O15239 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
NDUFA1O15239 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
NDUFA1O15239 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NDUFA1O15239 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NDUFA1O15239 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NDUFA1O15239 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NDUFA1O15239 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NDUFA1O15239 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NDUFA1O15239 ILK-212ENST00000532063 1617 ntTSL 2 BASIC20.07■□□□□ 0.8
NDUFA1O15239 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFA1O15239 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NDUFA1O15239 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFA1O15239 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFA1O15239 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20■□□□□ 0.79
NDUFA1O15239 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.98■□□□□ 0.79
NDUFA1O15239 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NDUFA1O15239 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NDUFA1O15239 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.93■□□□□ 0.78
NDUFA1O15239 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NDUFA1O15239 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.92■□□□□ 0.78
NDUFA1O15239 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NDUFA1O15239 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.9■□□□□ 0.78
NDUFA1O15239 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.9■□□□□ 0.78
NDUFA1O15239 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
NDUFA1O15239 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDUFA1O15239 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDUFA1O15239 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDUFA1O15239 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.83■□□□□ 0.76
NDUFA1O15239 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFA1O15239 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDUFA1O15239 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDUFA1O15239 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.79■□□□□ 0.76
NDUFA1O15239 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFA1O15239 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NDUFA1O15239 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
NDUFA1O15239 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFA1O15239 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFA1O15239 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NDUFA1O15239 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.76■□□□□ 0.75
NDUFA1O15239 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFA1O15239 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFA1O15239 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NDUFA1O15239 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFA1O15239 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms