RNA–Protein interactions for RNA: ENST00000331826.11

PCSK6-201, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 5 BASIC

Gene PCSK6, Length 2,309 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-201ENST00000331826 NISCHQ9Y2I1 1504 aa53.21■■■■■ 6.11
PCSK6-201ENST00000331826 SHROOM4Q9ULL8 1493 aa46.27■■■■■ 5
PCSK6-201ENST00000331826 SUPT5HO00267 1087 aaKnown RBP45.69■■■■■ 4.9
PCSK6-201ENST00000331826 ZCCHC6Q5VYS8 1495 aaKnown RBP45.14■■■■■ 4.82
PCSK6-201ENST00000331826 MYO15BQ96JP2 1530 aa44.87■■■■■ 4.77
PCSK6-201ENST00000331826 CCDC180Q9P1Z9 1646 aa44.71■■■■■ 4.75
PCSK6-201ENST00000331826 CHIC1Q5VXU3 224 aa44.69■■■■■ 4.75
PCSK6-201ENST00000331826 HRCP23327 699 aa44.63■■■■■ 4.73
PCSK6-201ENST00000331826 DCAF8L2P0C7V8 631 aa44.2■■■■■ 4.67
PCSK6-201ENST00000331826 PCGF6Q9BYE7 350 aa44.19■■■■■ 4.67
PCSK6-201ENST00000331826 PPARGC1BQ86YN6 1023 aaKnown RBP43.83■■■■■ 4.61
PCSK6-201ENST00000331826 LOC105371045A0A1W2PR82 267 aa43.57■■■■■ 4.57
PCSK6-201ENST00000331826 DCAF1Q9Y4B6 1507 aa43.57■■■■■ 4.56
PCSK6-201ENST00000331826 TRIM26Q12899 539 aaPredicted RBP42.99■■■■■ 4.47
PCSK6-201ENST00000331826 ABCC9O60706 1549 aa42.76■■■■■ 4.44
PCSK6-201ENST00000331826 RSF1Q96T23 1441 aaPredicted RBP42.48■■■■■ 4.39
PCSK6-201ENST00000331826 SCRIBQ14160 1630 aa42.35■■■■■ 4.37
PCSK6-201ENST00000331826 TRIM41Q8WV44 630 aa42.35■■■■■ 4.37
PCSK6-201ENST00000331826 FAM9AQ8IZU1 332 aaPredicted RBP42.25■■■■■ 4.35
PCSK6-201ENST00000331826 ZEB1P37275 1124 aaPredicted RBP42.24■■■■■ 4.35
PCSK6-201ENST00000331826 RB1CC1Q8TDY2 1594 aa42.24■■■■■ 4.35
PCSK6-201ENST00000331826 EHMT2Q96KQ7 1210 aa42.03■■■■■ 4.32
PCSK6-201ENST00000331826 SCAF1Q9H7N4 1312 aaKnown RBP41.73■■■■■ 4.27
PCSK6-201ENST00000331826 CECR2Q9BXF3 1484 aa41.64■■■■■ 4.26
PCSK6-201ENST00000331826 MROH2BQ7Z745 1585 aa41.53■■■■■ 4.24
PCSK6-201ENST00000331826 PELP1Q8IZL8 1130 aaKnown RBP41.41■■■■■ 4.22
PCSK6-201ENST00000331826 WIZO95785 1651 aa41.39■■■■■ 4.22
PCSK6-201ENST00000331826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.32■■■■■ 4.21
PCSK6-201ENST00000331826 NACADO15069 1562 aa41.17■■■■■ 4.18
PCSK6-201ENST00000331826 CCER1Q8TC90 406 aaPredicted RBP41.14■■■■■ 4.18
PCSK6-201ENST00000331826 EIF4G1Q04637 1599 aaKnown RBP41.07■■■■■ 4.16
PCSK6-201ENST00000331826 BAZ1AQ9NRL2 1556 aaPredicted RBP41.03■■■■■ 4.16
PCSK6-201ENST00000331826 ACIN1Q9UKV3 1341 aaKnown RBP40.95■■■■■ 4.15
PCSK6-201ENST00000331826 NEUROD1Q13562 356 aa40.93■■■■■ 4.14
PCSK6-201ENST00000331826 TTBK1Q5TCY1 1321 aaPredicted RBP40.85■■■■■ 4.13
PCSK6-201ENST00000331826 ABCC8Q09428 1581 aa40.8■■■■■ 4.12
PCSK6-201ENST00000331826 DIEXFQ68CQ4 756 aaKnown RBP40.77■■■■■ 4.12
PCSK6-201ENST00000331826 CCDC88BA6NC98 1476 aa40.74■■■■■ 4.11
PCSK6-201ENST00000331826 WRNQ14191 1432 aaPredicted RBP eCLIP40.69■■■■■ 4.1
PCSK6-201ENST00000331826 CEP162Q5TB80 1403 aa40.64■■■■■ 4.1
PCSK6-201ENST00000331826 GTF3C3Q9Y5Q9 886 aa40.57■■■■■ 4.09
PCSK6-201ENST00000331826 TOP2AP11388 1531 aaKnown RBP40.56■■■■■ 4.08
PCSK6-201ENST00000331826 SOGA1O94964 1423 aa40.54■■■■■ 4.08
PCSK6-201ENST00000331826 CENPBP07199 599 aaPredicted RBP40.45■■■■■ 4.07
PCSK6-201ENST00000331826 SMARCA2P51531 1590 aa40.45■■■■■ 4.07
PCSK6-201ENST00000331826 TNIKQ9UKE5 1360 aa40.43■■■■■ 4.06
PCSK6-201ENST00000331826 SMARCA4P51532 1647 aa40.38■■■■■ 4.05
PCSK6-201ENST00000331826 RUSC2Q8N2Y8 1516 aa40.37■■■■■ 4.05
PCSK6-201ENST00000331826 CSRNP3Q8WYN3 585 aa40.27■■■■■ 4.04
PCSK6-201ENST00000331826 UBTFP17480 764 aaKnown RBP40.26■■■■■ 4.04
PCSK6-201ENST00000331826 ZNF316A6NFI3 1004 aaPredicted RBP40.21■■■■■ 4.03
PCSK6-201ENST00000331826 EEA1Q15075 1411 aa40.14■■■■■ 4.02
PCSK6-201ENST00000331826 GOLGA3Q08378 1498 aa40.05■■■■■ 4
PCSK6-201ENST00000331826 UNC13AQ9UPW8 1703 aa40.03■■■■■ 4
PCSK6-201ENST00000331826 YTHDC1Q96MU7 727 aaKnown RBP40■■■■□ 3.99
PCSK6-201ENST00000331826 HNRNPUL2Q1KMD3 747 aaKnown RBP39.93■■■■□ 3.98
PCSK6-201ENST00000331826 MIER1Q8N108 512 aa39.87■■■■□ 3.97
PCSK6-201ENST00000331826 CEP164Q9UPV0 1460 aa39.72■■■■□ 3.95
PCSK6-201ENST00000331826 SYNJ1O43426 1573 aa39.71■■■■□ 3.95
PCSK6-201ENST00000331826 CLIP1P30622 1438 aa39.69■■■■□ 3.94
PCSK6-201ENST00000331826 KIF21BO75037 1637 aa39.68■■■■□ 3.94
PCSK6-201ENST00000331826 PABPN1Q86U42 306 aaKnown RBP eCLIP39.58■■■■□ 3.93
PCSK6-201ENST00000331826 VPS8Q8N3P4 1428 aa39.58■■■■□ 3.93
PCSK6-201ENST00000331826 RANGAP1P46060 587 aaPredicted RBP39.48■■■■□ 3.91
PCSK6-201ENST00000331826 RAPGEF2Q9Y4G8 1499 aa39.48■■■■□ 3.91
PCSK6-201ENST00000331826 PEG3Q9GZU2 1588 aa39.44■■■■□ 3.9
PCSK6-201ENST00000331826 BICRAQ9NZM4 1560 aa39.43■■■■□ 3.9
PCSK6-201ENST00000331826 MYT1Q01538 1121 aa39.42■■■■□ 3.9
PCSK6-201ENST00000331826 APLP2Q06481 763 aa39.41■■■■□ 3.9
PCSK6-201ENST00000331826 BAZ1BQ9UIG0 1483 aaKnown RBP39.38■■■■□ 3.9
PCSK6-201ENST00000331826 ATAD2BQ9ULI0 1458 aa39.16■■■■□ 3.86
PCSK6-201ENST00000331826 DHX57Q6P158 1386 aaKnown RBP39.15■■■■□ 3.86
PCSK6-201ENST00000331826 TOP2BQ02880 1626 aa39.03■■■■□ 3.84
PCSK6-201ENST00000331826 KANK4Q5T7N3 995 aaPredicted RBP39.02■■■■□ 3.84
PCSK6-201ENST00000331826 CLSPNQ9HAW4 1339 aa39.02■■■■□ 3.84
PCSK6-201ENST00000331826 ARAP1Q96P48 1450 aa39■■■■□ 3.83
PCSK6-201ENST00000331826 PRXQ9BXM0 1461 aa38.88■■■■□ 3.81
PCSK6-201ENST00000331826 SUPT16HQ9Y5B9 1047 aaKnown RBP38.87■■■■□ 3.81
PCSK6-201ENST00000331826 ERICH3Q5RHP9 1530 aa38.86■■■■□ 3.81
PCSK6-201ENST00000331826 BIVM-ERCC5R4GMW8 1640 aa38.86■■■■□ 3.81
PCSK6-201ENST00000331826 RRBP1Q9P2E9 1410 aaKnown RBP38.77■■■■□ 3.8
PCSK6-201ENST00000331826 CUX2O14529 1486 aa38.63■■■■□ 3.77
PCSK6-201ENST00000331826 ITGAEP38570 1179 aa38.61■■■■□ 3.77
PCSK6-201ENST00000331826 CCNB3Q8WWL7 1395 aa38.59■■■■□ 3.77
PCSK6-201ENST00000331826 CUX1P39880 1505 aa38.58■■■■□ 3.77
PCSK6-201ENST00000331826 KCNH8Q96L42 1107 aa38.55■■■■□ 3.76
PCSK6-201ENST00000331826 ARHGAP35Q9NRY4 1499 aa38.52■■■■□ 3.76
PCSK6-201ENST00000331826 KIF27Q86VH2 1401 aa38.48■■■■□ 3.75
PCSK6-201ENST00000331826 TSHZ2Q9NRE2 1034 aa38.45■■■■□ 3.75
PCSK6-201ENST00000331826 RAB3GAP2Q9H2M9 1393 aa38.41■■■■□ 3.74
PCSK6-201ENST00000331826 MAPKBP1O60336 1514 aa38.41■■■■□ 3.74
PCSK6-201ENST00000331826 TIAM1Q13009 1591 aa38.2■■■■□ 3.71
PCSK6-201ENST00000331826 HMGXB3Q12766 1538 aa38.18■■■■□ 3.7
PCSK6-201ENST00000331826 WDR97A6NE52 1622 aa38.18■■■■□ 3.7
PCSK6-201ENST00000331826 SIN3AQ96ST3 1273 aa38.17■■■■□ 3.7
PCSK6-201ENST00000331826 NCAPD3P42695 1498 aa38.17■■■■□ 3.7
PCSK6-201ENST00000331826 BCANQ96GW7 911 aa38.17■■■■□ 3.7
PCSK6-201ENST00000331826 DDX10Q13206 875 aaKnown RBP38.16■■■■□ 3.7
PCSK6-201ENST00000331826 SETD5Q9C0A6 1442 aa38.16■■■■□ 3.7
PCSK6-201ENST00000331826 CFTRP13569 1480 aa38.14■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms