RNA–Protein interactions for RNA: ENST00000575842.5

ACTG1-210, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG1, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-210ENST00000575842 NISCHQ9Y2I1 1504 aa52.09■■■■■ 5.93
ACTG1-210ENST00000575842 HRCP23327 699 aa45.06■■■■■ 4.8
ACTG1-210ENST00000575842 SHROOM4Q9ULL8 1493 aa44.96■■■■■ 4.79
ACTG1-210ENST00000575842 SUPT5HO00267 1087 aaKnown RBP44.68■■■■■ 4.74
ACTG1-210ENST00000575842 MYO15BQ96JP2 1530 aa44.38■■■■■ 4.69
ACTG1-210ENST00000575842 ZCCHC6Q5VYS8 1495 aaKnown RBP44.35■■■■■ 4.69
ACTG1-210ENST00000575842 CHIC1Q5VXU3 224 aa44.24■■■■■ 4.67
ACTG1-210ENST00000575842 PCGF6Q9BYE7 350 aa43.98■■■■■ 4.63
ACTG1-210ENST00000575842 CCDC180Q9P1Z9 1646 aa43.84■■■■■ 4.61
ACTG1-210ENST00000575842 DCAF1Q9Y4B6 1507 aa43.83■■■■■ 4.61
ACTG1-210ENST00000575842 PPARGC1BQ86YN6 1023 aaKnown RBP43.65■■■■■ 4.58
ACTG1-210ENST00000575842 PELP1Q8IZL8 1130 aaKnown RBP43.21■■■■■ 4.51
ACTG1-210ENST00000575842 TRIM26Q12899 539 aaPredicted RBP43.06■■■■■ 4.48
ACTG1-210ENST00000575842 ZEB1P37275 1124 aaPredicted RBP42.82■■■■■ 4.44
ACTG1-210ENST00000575842 LOC105371045A0A1W2PR82 267 aa42.81■■■■■ 4.44
ACTG1-210ENST00000575842 DCAF8L2P0C7V8 631 aa42.41■■■■■ 4.38
ACTG1-210ENST00000575842 SCAF1Q9H7N4 1312 aaKnown RBP42.2■■■■■ 4.35
ACTG1-210ENST00000575842 ABCC9O60706 1549 aa42.1■■■■■ 4.33
ACTG1-210ENST00000575842 TRIM41Q8WV44 630 aa41.65■■■■■ 4.26
ACTG1-210ENST00000575842 RSF1Q96T23 1441 aaPredicted RBP41.65■■■■■ 4.26
ACTG1-210ENST00000575842 MYT1Q01538 1121 aa41.55■■■■■ 4.24
ACTG1-210ENST00000575842 RB1CC1Q8TDY2 1594 aa41.49■■■■■ 4.23
ACTG1-210ENST00000575842 ACIN1Q9UKV3 1341 aaKnown RBP41.47■■■■■ 4.23
ACTG1-210ENST00000575842 NEUROD1Q13562 356 aa41.18■■■■■ 4.18
ACTG1-210ENST00000575842 FAM9AQ8IZU1 332 aaPredicted RBP41.18■■■■■ 4.18
ACTG1-210ENST00000575842 CENPBP07199 599 aaPredicted RBP41.07■■■■■ 4.17
ACTG1-210ENST00000575842 SCRIBQ14160 1630 aa41.06■■■■■ 4.16
ACTG1-210ENST00000575842 CCER1Q8TC90 406 aaPredicted RBP40.93■■■■■ 4.14
ACTG1-210ENST00000575842 GTF3C3Q9Y5Q9 886 aa40.91■■■■■ 4.14
ACTG1-210ENST00000575842 DIEXFQ68CQ4 756 aaKnown RBP40.89■■■■■ 4.14
ACTG1-210ENST00000575842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.88■■■■■ 4.13
ACTG1-210ENST00000575842 WRNQ14191 1432 aaPredicted RBP eCLIP40.64■■■■■ 4.11e-8■□□□□ 10.4
ACTG1-210ENST00000575842 EHMT2Q96KQ7 1210 aa40.63■■■■■ 4.1
ACTG1-210ENST00000575842 EIF4G1Q04637 1599 aaKnown RBP40.51■■■■■ 4.07
ACTG1-210ENST00000575842 MROH2BQ7Z745 1585 aa40.48■■■■■ 4.07
ACTG1-210ENST00000575842 CECR2Q9BXF3 1484 aa40.43■■■■■ 4.06
ACTG1-210ENST00000575842 WIZO95785 1651 aa40.33■■■■■ 4.05
ACTG1-210ENST00000575842 ZNF316A6NFI3 1004 aaPredicted RBP40.33■■■■■ 4.05
ACTG1-210ENST00000575842 BAZ1AQ9NRL2 1556 aaPredicted RBP40.33■■■■■ 4.05
ACTG1-210ENST00000575842 NACADO15069 1562 aa40.2■■■■■ 4.03
ACTG1-210ENST00000575842 CEP162Q5TB80 1403 aa40.17■■■■■ 4.02
ACTG1-210ENST00000575842 TNIKQ9UKE5 1360 aa40.1■■■■■ 4.01
ACTG1-210ENST00000575842 EEA1Q15075 1411 aa39.95■■■■□ 3.99
ACTG1-210ENST00000575842 CCDC88BA6NC98 1476 aa39.9■■■■□ 3.98
ACTG1-210ENST00000575842 TOP2AP11388 1531 aaKnown RBP39.82■■■■□ 3.97
ACTG1-210ENST00000575842 ABCC8Q09428 1581 aa39.81■■■■□ 3.96
ACTG1-210ENST00000575842 MIER1Q8N108 512 aa39.79■■■■□ 3.96
ACTG1-210ENST00000575842 YTHDC1Q96MU7 727 aaKnown RBP39.79■■■■□ 3.96
ACTG1-210ENST00000575842 TTBK1Q5TCY1 1321 aaPredicted RBP39.71■■■■□ 3.95
ACTG1-210ENST00000575842 CLSPNQ9HAW4 1339 aa39.69■■■■□ 3.94
ACTG1-210ENST00000575842 SOGA1O94964 1423 aa39.69■■■■□ 3.94
ACTG1-210ENST00000575842 GOLGA3Q08378 1498 aa39.63■■■■□ 3.94
ACTG1-210ENST00000575842 CSRNP3Q8WYN3 585 aa39.62■■■■□ 3.93
ACTG1-210ENST00000575842 SMARCA2P51531 1590 aa39.61■■■■□ 3.93
ACTG1-210ENST00000575842 UBTFP17480 764 aaKnown RBP39.45■■■■□ 3.91
ACTG1-210ENST00000575842 SMARCA4P51532 1647 aa39.43■■■■□ 3.9
ACTG1-210ENST00000575842 RUSC2Q8N2Y8 1516 aa39.4■■■■□ 3.9
ACTG1-210ENST00000575842 KIF21BO75037 1637 aa39.33■■■■□ 3.89
ACTG1-210ENST00000575842 CEP164Q9UPV0 1460 aa39.29■■■■□ 3.88
ACTG1-210ENST00000575842 HNRNPUL2Q1KMD3 747 aaKnown RBP39.26■■■■□ 3.88
ACTG1-210ENST00000575842 VPS8Q8N3P4 1428 aa39.22■■■■□ 3.87
ACTG1-210ENST00000575842 SUPT16HQ9Y5B9 1047 aaKnown RBP39.17■■■■□ 3.86
ACTG1-210ENST00000575842 CLIP1P30622 1438 aa39.15■■■■□ 3.86
ACTG1-210ENST00000575842 BAZ1BQ9UIG0 1483 aaKnown RBP39.11■■■■□ 3.85
ACTG1-210ENST00000575842 APLP2Q06481 763 aa38.93■■■■□ 3.82
ACTG1-210ENST00000575842 DHX57Q6P158 1386 aaKnown RBP38.91■■■■□ 3.82
ACTG1-210ENST00000575842 TSHZ2Q9NRE2 1034 aa38.89■■■■□ 3.82
ACTG1-210ENST00000575842 ANP32EQ9BTT0 268 aa38.88■■■■□ 3.82
ACTG1-210ENST00000575842 SYNJ1O43426 1573 aa38.85■■■■□ 3.81
ACTG1-210ENST00000575842 PEG3Q9GZU2 1588 aa38.71■■■■□ 3.79
ACTG1-210ENST00000575842 RAPGEF2Q9Y4G8 1499 aa38.7■■■■□ 3.79
ACTG1-210ENST00000575842 UNC13AQ9UPW8 1703 aa38.68■■■■□ 3.78
ACTG1-210ENST00000575842 CUX2O14529 1486 aa38.63■■■■□ 3.77
ACTG1-210ENST00000575842 RRBP1Q9P2E9 1410 aaKnown RBP38.54■■■■□ 3.76
ACTG1-210ENST00000575842 ERICH3Q5RHP9 1530 aa38.49■■■■□ 3.75
ACTG1-210ENST00000575842 ARAP1Q96P48 1450 aa38.42■■■■□ 3.74
ACTG1-210ENST00000575842 BCL11AQ9H165 835 aa38.36■■■■□ 3.73
ACTG1-210ENST00000575842 TOP2BQ02880 1626 aa38.35■■■■□ 3.73
ACTG1-210ENST00000575842 PABPN1Q86U42 306 aaKnown RBP eCLIP38.34■■■■□ 3.73
ACTG1-210ENST00000575842 PRXQ9BXM0 1461 aa38.3■■■■□ 3.72
ACTG1-210ENST00000575842 BICRAQ9NZM4 1560 aa38.26■■■■□ 3.72
ACTG1-210ENST00000575842 BIVM-ERCC5R4GMW8 1640 aa38.23■■■■□ 3.71
ACTG1-210ENST00000575842 KANK4Q5T7N3 995 aaPredicted RBP38.22■■■■□ 3.71
ACTG1-210ENST00000575842 CCNB3Q8WWL7 1395 aa38.21■■■■□ 3.71
ACTG1-210ENST00000575842 MAPKBP1O60336 1514 aa38.12■■■■□ 3.69
ACTG1-210ENST00000575842 KCNH8Q96L42 1107 aa38.12■■■■□ 3.69
ACTG1-210ENST00000575842 RANGAP1P46060 587 aaPredicted RBP38.11■■■■□ 3.69
ACTG1-210ENST00000575842 FKBP8Q14318 412 aa38.1■■■■□ 3.69
ACTG1-210ENST00000575842 ATAD2BQ9ULI0 1458 aa38.07■■■■□ 3.69
ACTG1-210ENST00000575842 RBM19Q9Y4C8 960 aaKnown RBP38.01■■■■□ 3.68
ACTG1-210ENST00000575842 BCANQ96GW7 911 aa38■■■■□ 3.67
ACTG1-210ENST00000575842 RAB3GAP2Q9H2M9 1393 aa37.99■■■■□ 3.67
ACTG1-210ENST00000575842 NEFLP07196 543 aa37.98■■■■□ 3.67
ACTG1-210ENST00000575842 CCER2I3L3R5 266 aa37.93■■■■□ 3.66
ACTG1-210ENST00000575842 MAP3K1Q13233 1512 aa37.92■■■■□ 3.66
ACTG1-210ENST00000575842 TIMELESSQ9UNS1 1208 aa37.89■■■■□ 3.66
ACTG1-210ENST00000575842 PPP1R15AO75807 674 aaPredicted RBP37.88■■■■□ 3.65
ACTG1-210ENST00000575842 ARHGAP35Q9NRY4 1499 aa37.87■■■■□ 3.65
ACTG1-210ENST00000575842 WDR97A6NE52 1622 aa37.87■■■■□ 3.65
ACTG1-210ENST00000575842 DNAJC5BQ9UF47 199 aa37.85■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms