RNA–Protein interactions for RNA: ENST00000409917.5

INO80B-203, Transcript of INO80 complex subunit B, humanhuman

TSL 2 BASIC

Gene INO80B, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80B-203ENST00000409917 NISCHQ9Y2I1 1504 aa74.68■■■■■ 9.55
INO80B-203ENST00000409917 CCDC180Q9P1Z9 1646 aa66.35■■■■■ 8.21
INO80B-203ENST00000409917 ABCC9O60706 1549 aa65.61■■■■■ 8.09
INO80B-203ENST00000409917 DCAF8L2P0C7V8 631 aa62.84■■■■■ 7.65
INO80B-203ENST00000409917 RB1CC1Q8TDY2 1594 aa62.74■■■■■ 7.63
INO80B-203ENST00000409917 NACADO15069 1562 aa62.57■■■■■ 7.61
INO80B-203ENST00000409917 ZCCHC6Q5VYS8 1495 aaKnown RBP62.08■■■■■ 7.53
INO80B-203ENST00000409917 MYO15BQ96JP2 1530 aa62.01■■■■■ 7.52
INO80B-203ENST00000409917 DCAF1Q9Y4B6 1507 aa61.63■■■■■ 7.46
INO80B-203ENST00000409917 PABPN1Q86U42 306 aaKnown RBP eCLIP61.4■■■■■ 7.42
INO80B-203ENST00000409917 UNC13AQ9UPW8 1703 aa61.31■■■■■ 7.41
INO80B-203ENST00000409917 BICRAQ9NZM4 1560 aa60.97■■■■■ 7.35
INO80B-203ENST00000409917 DNAJC5BQ9UF47 199 aa60.79■■■■■ 7.32
INO80B-203ENST00000409917 SCRIBQ14160 1630 aa60.71■■■■■ 7.31
INO80B-203ENST00000409917 SHROOM4Q9ULL8 1493 aa60.04■■■■■ 7.2
INO80B-203ENST00000409917 EIF4G1Q04637 1599 aaKnown RBP59.35■■■■■ 7.09
INO80B-203ENST00000409917 CC2D2AQ9P2K1 1620 aa59.23■■■■■ 7.07
INO80B-203ENST00000409917 CECR2Q9BXF3 1484 aa58.94■■■■■ 7.03
INO80B-203ENST00000409917 SMARCA4P51532 1647 aa57.98■■■■■ 6.87
INO80B-203ENST00000409917 NCAPD3P42695 1498 aa57.85■■■■■ 6.85
INO80B-203ENST00000409917 ATAD2BQ9ULI0 1458 aa57.85■■■■■ 6.85
INO80B-203ENST00000409917 BAZ1AQ9NRL2 1556 aaPredicted RBP57.82■■■■■ 6.85
INO80B-203ENST00000409917 SMARCA2P51531 1590 aa57.62■■■■■ 6.81
INO80B-203ENST00000409917 MROH2BQ7Z745 1585 aa57.62■■■■■ 6.81
INO80B-203ENST00000409917 HMGXB3Q12766 1538 aa57.4■■■■■ 6.78
INO80B-203ENST00000409917 PEG3Q9GZU2 1588 aa57.36■■■■■ 6.77
INO80B-203ENST00000409917 BAZ1BQ9UIG0 1483 aaKnown RBP57.3■■■■■ 6.76
INO80B-203ENST00000409917 WIZO95785 1651 aa56.94■■■■■ 6.71
INO80B-203ENST00000409917 RSF1Q96T23 1441 aaPredicted RBP56.84■■■■■ 6.69
INO80B-203ENST00000409917 NESP48681 1621 aa56.69■■■■■ 6.67
INO80B-203ENST00000409917 ERCC6Q03468 1493 aa56.48■■■■■ 6.63
INO80B-203ENST00000409917 LAMC3Q9Y6N6 1575 aa56.27■■■■■ 6.6
INO80B-203ENST00000409917 TOP2AP11388 1531 aaKnown RBP56.23■■■■■ 6.59
INO80B-203ENST00000409917 CADPSQ9ULU8 1353 aa56.18■■■■■ 6.58
INO80B-203ENST00000409917 PDS5BQ9NTI5 1447 aa55.98■■■■■ 6.55
INO80B-203ENST00000409917 CUX2O14529 1486 aa55.94■■■■■ 6.55
INO80B-203ENST00000409917 KIF21AQ7Z4S6 1674 aa55.84■■■■■ 6.53
INO80B-203ENST00000409917 THOC2Q8NI27 1593 aaKnown RBP55.73■■■■■ 6.51
INO80B-203ENST00000409917 CFTRP13569 1480 aa55.72■■■■■ 6.51
INO80B-203ENST00000409917 CCDC88BA6NC98 1476 aa55.71■■■■■ 6.51
INO80B-203ENST00000409917 FANCD2Q9BXW9 1451 aa55.5■■■■■ 6.48
INO80B-203ENST00000409917 MRC2Q9UBG0 1479 aa55.43■■■■■ 6.46
INO80B-203ENST00000409917 CEP164Q9UPV0 1460 aa55.42■■■■■ 6.46
INO80B-203ENST00000409917 SUPT5HO00267 1087 aaKnown RBP55.28■■■■■ 6.44
INO80B-203ENST00000409917 WDR62O43379 1518 aa55.23■■■■■ 6.43
INO80B-203ENST00000409917 PRDM2Q13029 1718 aa55.03■■■■■ 6.4
INO80B-203ENST00000409917 URB2Q14146 1524 aaKnown RBP55.01■■■■■ 6.4
INO80B-203ENST00000409917 DNAJC5Q9H3Z4 198 aa54.9■■■■■ 6.38
INO80B-203ENST00000409917 TOPBP1Q92547 1522 aa54.57■■■■■ 6.33
INO80B-203ENST00000409917 ABCC8Q09428 1581 aa54.43■■■■■ 6.3
INO80B-203ENST00000409917 DNMBPQ6XZF7 1577 aa54.4■■■■■ 6.3
INO80B-203ENST00000409917 IFT140Q96RY7 1462 aa54.28■■■■■ 6.28
INO80B-203ENST00000409917 ZNF608Q9ULD9 1512 aaPredicted RBP54.2■■■■■ 6.27
INO80B-203ENST00000409917 POLA1P09884 1462 aaPredicted RBP54.09■■■■■ 6.25
INO80B-203ENST00000409917 CUX1P39880 1505 aa54.04■■■■■ 6.24
INO80B-203ENST00000409917 TARBP1Q13395 1621 aaKnown RBP53.97■■■■■ 6.23
INO80B-203ENST00000409917 RAD54L2Q9Y4B4 1467 aa53.97■■■■■ 6.23
INO80B-203ENST00000409917 FGD5Q6ZNL6 1462 aa53.92■■■■■ 6.22
INO80B-203ENST00000409917 SOGA1O94964 1423 aa53.92■■■■■ 6.22
INO80B-203ENST00000409917 AQRO60306 1485 aaKnown RBP eCLIP53.89■■■■■ 6.221e-7■■■■□ 20.1
INO80B-203ENST00000409917 EIF4G3O43432 1585 aaKnown RBP53.81■■■■■ 6.2
INO80B-203ENST00000409917 OSCARQ8IYS5 282 aa53.75■■■■■ 6.2
INO80B-203ENST00000409917 TDRD9Q8NDG6 1382 aaKnown RBP53.74■■■■■ 6.19
INO80B-203ENST00000409917 WRNQ14191 1432 aaPredicted RBP eCLIP53.55■■■■■ 6.16
INO80B-203ENST00000409917 SYNJ1O43426 1573 aa53.43■■■■■ 6.14
INO80B-203ENST00000409917 TOP2BQ02880 1626 aa53.39■■■■■ 6.14
INO80B-203ENST00000409917 FBLN2P98095 1184 aa53.37■■■■■ 6.13
INO80B-203ENST00000409917 BIVM-ERCC5R4GMW8 1640 aa53.35■■■■■ 6.13
INO80B-203ENST00000409917 WDR97A6NE52 1622 aa53.34■■■■■ 6.13
INO80B-203ENST00000409917 ABCA10Q8WWZ4 1543 aa53.32■■■■■ 6.13
INO80B-203ENST00000409917 SNAPC4Q5SXM2 1469 aa53.26■■■■■ 6.12
INO80B-203ENST00000409917 GRIN2BQ13224 1484 aa53.25■■■■■ 6.11
INO80B-203ENST00000409917 GAPVD1Q14C86 1478 aa53.24■■■■■ 6.11
INO80B-203ENST00000409917 CHD1O14646 1710 aa53.2■■■■■ 6.11
INO80B-203ENST00000409917 ABCA5Q8WWZ7 1642 aa53.09■■■■■ 6.09
INO80B-203ENST00000409917 MAGI1Q96QZ7 1491 aaPredicted RBP53.09■■■■■ 6.09
INO80B-203ENST00000409917 CHMP7Q8WUX9 453 aaPredicted RBP53.09■■■■■ 6.09
INO80B-203ENST00000409917 TRIM41Q8WV44 630 aa53.02■■■■■ 6.08
INO80B-203ENST00000409917 PBRM1Q86U86 1689 aa53.01■■■■■ 6.08
INO80B-203ENST00000409917 SYNJ2O15056 1496 aa52.94■■■■■ 6.06
INO80B-203ENST00000409917 RIMBP3CA6NJZ7 1639 aa52.8■■■■■ 6.04
INO80B-203ENST00000409917 RIMBP3BA6NNM3 1639 aa52.8■■■■■ 6.04
INO80B-203ENST00000409917 RIMBP3Q9UFD9 1639 aa52.8■■■■■ 6.04
INO80B-203ENST00000409917 ARHGEF11O15085 1522 aa52.77■■■■■ 6.04
INO80B-203ENST00000409917 CLASP1Q7Z460 1538 aa52.65■■■■■ 6.02
INO80B-203ENST00000409917 ERICH3Q5RHP9 1530 aa52.63■■■■■ 6.02
INO80B-203ENST00000409917 ADAMTS12P58397 1594 aa52.63■■■■■ 6.02
INO80B-203ENST00000409917 FHAD1B1AJZ9 1412 aa52.58■■■■■ 6.01
INO80B-203ENST00000409917 GRIN2AQ12879 1464 aa52.57■■■■■ 6.01
INO80B-203ENST00000409917 CYB5RLQ6IPT4 315 aa52.49■■■■■ 5.99
INO80B-203ENST00000409917 KIF27Q86VH2 1401 aa52.43■■■■■ 5.98
INO80B-203ENST00000409917 IGF1RP08069 1367 aa52.39■■■■■ 5.98
INO80B-203ENST00000409917 NUP160Q12769 1436 aa52.36■■■■■ 5.97
INO80B-203ENST00000409917 ARAP1Q96P48 1450 aa52.36■■■■■ 5.97
INO80B-203ENST00000409917 CEP170Q5SW79 1584 aa52.34■■■■■ 5.97
INO80B-203ENST00000409917 RUSC2Q8N2Y8 1516 aa52.04■■■■■ 5.92
INO80B-203ENST00000409917 ERCC6L2Q5T890 1561 aa52.04■■■■■ 5.92
INO80B-203ENST00000409917 CARMIL1Q5VZK9 1371 aa52.03■■■■■ 5.92
INO80B-203ENST00000409917 CUL7Q14999 1698 aa52■■■■■ 5.92
INO80B-203ENST00000409917 JPH4Q96JJ6 628 aa51.95■■■■■ 5.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms