RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 NISCHQ9Y2I1 1504 aa73.05■■■■■ 9.28
CSNK1E-206ENST00000413574 CCDC180Q9P1Z9 1646 aa64.58■■■■■ 7.93
CSNK1E-206ENST00000413574 ABCC9O60706 1549 aa62.63■■■■■ 7.62
CSNK1E-206ENST00000413574 ZCCHC6Q5VYS8 1495 aaKnown RBP60.99■■■■■ 7.35
CSNK1E-206ENST00000413574 DCAF8L2P0C7V8 631 aa60.87■■■■■ 7.33
CSNK1E-206ENST00000413574 NACADO15069 1562 aa60.52■■■■■ 7.28
CSNK1E-206ENST00000413574 RB1CC1Q8TDY2 1594 aa60.44■■■■■ 7.27
CSNK1E-206ENST00000413574 DCAF1Q9Y4B6 1507 aa60.36■■■■■ 7.25
CSNK1E-206ENST00000413574 MYO15BQ96JP2 1530 aa60.32■■■■■ 7.25
CSNK1E-206ENST00000413574 UNC13AQ9UPW8 1703 aa59.26■■■■■ 7.08
CSNK1E-206ENST00000413574 SCRIBQ14160 1630 aa59.12■■■■■ 7.06
CSNK1E-206ENST00000413574 PABPN1Q86U42 306 aaKnown RBP eCLIP58.69■■■■■ 6.99
CSNK1E-206ENST00000413574 BICRAQ9NZM4 1560 aa58.68■■■■■ 6.98
CSNK1E-206ENST00000413574 SHROOM4Q9ULL8 1493 aa58.31■■■■■ 6.93
CSNK1E-206ENST00000413574 EIF4G1Q04637 1599 aaKnown RBP57.04■■■■■ 6.72
CSNK1E-206ENST00000413574 CECR2Q9BXF3 1484 aa56.92■■■■■ 6.7
CSNK1E-206ENST00000413574 DNAJC5BQ9UF47 199 aa56.88■■■■■ 6.7
CSNK1E-206ENST00000413574 CC2D2AQ9P2K1 1620 aa56.66■■■■■ 6.66
CSNK1E-206ENST00000413574 SMARCA4P51532 1647 aa56.56■■■■■ 6.64
CSNK1E-206ENST00000413574 BAZ1AQ9NRL2 1556 aaPredicted RBP56.54■■■■■ 6.64
CSNK1E-206ENST00000413574 MROH2BQ7Z745 1585 aa56.38■■■■■ 6.62
CSNK1E-206ENST00000413574 ATAD2BQ9ULI0 1458 aa56.04■■■■■ 6.56
CSNK1E-206ENST00000413574 SMARCA2P51531 1590 aa55.96■■■■■ 6.55
CSNK1E-206ENST00000413574 RSF1Q96T23 1441 aaPredicted RBP55.95■■■■■ 6.55
CSNK1E-206ENST00000413574 PEG3Q9GZU2 1588 aa55.92■■■■■ 6.54
CSNK1E-206ENST00000413574 WIZO95785 1651 aa55.85■■■■■ 6.53
CSNK1E-206ENST00000413574 NCAPD3P42695 1498 aa55.85■■■■■ 6.53
CSNK1E-206ENST00000413574 HMGXB3Q12766 1538 aa55.63■■■■■ 6.5
CSNK1E-206ENST00000413574 BAZ1BQ9UIG0 1483 aaKnown RBP55.62■■■■■ 6.49
CSNK1E-206ENST00000413574 SUPT5HO00267 1087 aaKnown RBP55.19■■■■■ 6.43
CSNK1E-206ENST00000413574 TOP2AP11388 1531 aaKnown RBP55.19■■■■■ 6.43
CSNK1E-206ENST00000413574 CCDC88BA6NC98 1476 aa54.59■■■■■ 6.33
CSNK1E-206ENST00000413574 NESP48681 1621 aa54.45■■■■■ 6.31
CSNK1E-206ENST00000413574 CADPSQ9ULU8 1353 aa54.28■■■■■ 6.28
CSNK1E-206ENST00000413574 LAMC3Q9Y6N6 1575 aa54.27■■■■■ 6.28
CSNK1E-206ENST00000413574 CFTRP13569 1480 aa54.12■■■■■ 6.25
CSNK1E-206ENST00000413574 PDS5BQ9NTI5 1447 aa53.86■■■■■ 6.21
CSNK1E-206ENST00000413574 ERCC6Q03468 1493 aa53.86■■■■■ 6.21
CSNK1E-206ENST00000413574 KIF21AQ7Z4S6 1674 aa53.83■■■■■ 6.21
CSNK1E-206ENST00000413574 PRDM2Q13029 1718 aa53.83■■■■■ 6.21
CSNK1E-206ENST00000413574 FANCD2Q9BXW9 1451 aa53.7■■■■■ 6.19
CSNK1E-206ENST00000413574 CEP164Q9UPV0 1460 aa53.54■■■■■ 6.16
CSNK1E-206ENST00000413574 THOC2Q8NI27 1593 aaKnown RBP53.39■■■■■ 6.14
CSNK1E-206ENST00000413574 MRC2Q9UBG0 1479 aa53.3■■■■■ 6.12
CSNK1E-206ENST00000413574 URB2Q14146 1524 aaKnown RBP53.15■■■■■ 6.1
CSNK1E-206ENST00000413574 WDR62O43379 1518 aa53.11■■■■■ 6.09
CSNK1E-206ENST00000413574 CUX2O14529 1486 aa52.94■■■■■ 6.06
CSNK1E-206ENST00000413574 TOPBP1Q92547 1522 aa52.93■■■■■ 6.06
CSNK1E-206ENST00000413574 DNMBPQ6XZF7 1577 aa52.9■■■■■ 6.06
CSNK1E-206ENST00000413574 ABCC8Q09428 1581 aa52.9■■■■■ 6.06
CSNK1E-206ENST00000413574 CUX1P39880 1505 aa52.83■■■■■ 6.05
CSNK1E-206ENST00000413574 WRNQ14191 1432 aaPredicted RBP eCLIP52.72■■■■■ 6.03
CSNK1E-206ENST00000413574 SYNJ1O43426 1573 aa52.63■■■■■ 6.02
CSNK1E-206ENST00000413574 POLA1P09884 1462 aaPredicted RBP52.54■■■■■ 6
CSNK1E-206ENST00000413574 TOP2BQ02880 1626 aa52.53■■■■■ 6
CSNK1E-206ENST00000413574 BIVM-ERCC5R4GMW8 1640 aa52.53■■■■■ 6
CSNK1E-206ENST00000413574 FGD5Q6ZNL6 1462 aa52.52■■■■■ 6
CSNK1E-206ENST00000413574 RAD54L2Q9Y4B4 1467 aa52.36■■■■■ 5.97
CSNK1E-206ENST00000413574 IFT140Q96RY7 1462 aa52.35■■■■■ 5.97
CSNK1E-206ENST00000413574 TARBP1Q13395 1621 aaKnown RBP52.32■■■■■ 5.97
CSNK1E-206ENST00000413574 SOGA1O94964 1423 aa52.31■■■■■ 5.97
CSNK1E-206ENST00000413574 ZNF608Q9ULD9 1512 aaPredicted RBP52.18■■■■■ 5.94
CSNK1E-206ENST00000413574 WDR97A6NE52 1622 aa52.07■■■■■ 5.93
CSNK1E-206ENST00000413574 TRIM41Q8WV44 630 aa52.01■■■■■ 5.92
CSNK1E-206ENST00000413574 ABCA10Q8WWZ4 1543 aa51.99■■■■■ 5.91
CSNK1E-206ENST00000413574 TDRD9Q8NDG6 1382 aaKnown RBP51.98■■■■■ 5.91
CSNK1E-206ENST00000413574 EIF4G3O43432 1585 aaKnown RBP51.98■■■■■ 5.91
CSNK1E-206ENST00000413574 AQRO60306 1485 aaKnown RBP eCLIP51.97■■■■■ 5.911e-6■■■■□ 21.7
CSNK1E-206ENST00000413574 CHIC1Q5VXU3 224 aa51.88■■■■■ 5.9
CSNK1E-206ENST00000413574 ABCA5Q8WWZ7 1642 aa51.77■■■■■ 5.88
CSNK1E-206ENST00000413574 GAPVD1Q14C86 1478 aa51.72■■■■■ 5.87
CSNK1E-206ENST00000413574 PBRM1Q86U86 1689 aa51.64■■■■■ 5.86
CSNK1E-206ENST00000413574 GRIN2BQ13224 1484 aa51.59■■■■■ 5.85
CSNK1E-206ENST00000413574 KIF27Q86VH2 1401 aa51.53■■■■■ 5.84
CSNK1E-206ENST00000413574 SNAPC4Q5SXM2 1469 aa51.48■■■■■ 5.83
CSNK1E-206ENST00000413574 RUSC2Q8N2Y8 1516 aa51.45■■■■■ 5.83
CSNK1E-206ENST00000413574 ERICH3Q5RHP9 1530 aa51.37■■■■■ 5.81
CSNK1E-206ENST00000413574 MAGI1Q96QZ7 1491 aaPredicted RBP51.35■■■■■ 5.81
CSNK1E-206ENST00000413574 IGF1RP08069 1367 aa51.26■■■■■ 5.8
CSNK1E-206ENST00000413574 CHD1O14646 1710 aa51.24■■■■■ 5.79
CSNK1E-206ENST00000413574 FBLN2P98095 1184 aa51.22■■■■■ 5.79
CSNK1E-206ENST00000413574 ADAMTS12P58397 1594 aa51.21■■■■■ 5.79
CSNK1E-206ENST00000413574 SYNJ2O15056 1496 aa51.17■■■■■ 5.78
CSNK1E-206ENST00000413574 CHMP7Q8WUX9 453 aaPredicted RBP51.13■■■■■ 5.77
CSNK1E-206ENST00000413574 FHAD1B1AJZ9 1412 aa51.11■■■■■ 5.77
CSNK1E-206ENST00000413574 CUL7Q14999 1698 aa51.07■■■■■ 5.77
CSNK1E-206ENST00000413574 FAM9AQ8IZU1 332 aaPredicted RBP51.04■■■■■ 5.76
CSNK1E-206ENST00000413574 CARMIL1Q5VZK9 1371 aa50.97■■■■■ 5.75
CSNK1E-206ENST00000413574 GRIN2AQ12879 1464 aa50.96■■■■■ 5.75
CSNK1E-206ENST00000413574 EEA1Q15075 1411 aa50.95■■■■■ 5.75
CSNK1E-206ENST00000413574 OSCARQ8IYS5 282 aa50.94■■■■■ 5.74
CSNK1E-206ENST00000413574 CSRNP3Q8WYN3 585 aa50.89■■■■■ 5.74
CSNK1E-206ENST00000413574 PRXQ9BXM0 1461 aa50.74■■■■■ 5.71
CSNK1E-206ENST00000413574 RAPGEF2Q9Y4G8 1499 aa50.74■■■■■ 5.71
CSNK1E-206ENST00000413574 CEP170Q5SW79 1584 aa50.72■■■■■ 5.71
CSNK1E-206ENST00000413574 NUP160Q12769 1436 aa50.67■■■■■ 5.7
CSNK1E-206ENST00000413574 CLASP1Q7Z460 1538 aa50.6■■■■■ 5.69
CSNK1E-206ENST00000413574 DNAJC5Q9H3Z4 198 aa50.54■■■■■ 5.68
CSNK1E-206ENST00000413574 KIF21BO75037 1637 aa50.46■■■■■ 5.67
CSNK1E-206ENST00000413574 EHMT2Q96KQ7 1210 aa50.41■■■■■ 5.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms