RNA–Protein interactions for RNA: ENST00000222725.9

LFNG-201, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LFNG, Length 2,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-201ENST00000222725 NISCHQ9Y2I1 1504 aa57.61■■■■■ 6.81
LFNG-201ENST00000222725 CCDC180Q9P1Z9 1646 aa49.28■■■■■ 5.48
LFNG-201ENST00000222725 ZCCHC6Q5VYS8 1495 aaKnown RBP48.75■■■■■ 5.4
LFNG-201ENST00000222725 SHROOM4Q9ULL8 1493 aa48.53■■■■■ 5.36
LFNG-201ENST00000222725 SUPT5HO00267 1087 aaKnown RBP47.54■■■■■ 5.2
LFNG-201ENST00000222725 DCAF1Q9Y4B6 1507 aa47.5■■■■■ 5.19
LFNG-201ENST00000222725 DCAF8L2P0C7V8 631 aa47.28■■■■■ 5.16
LFNG-201ENST00000222725 CHIC1Q5VXU3 224 aa46.33■■■■■ 5.01
LFNG-201ENST00000222725 MYO15BQ96JP2 1530 aa46.24■■■■■ 4.99
LFNG-201ENST00000222725 ABCC9O60706 1549 aa46■■■■■ 4.95
LFNG-201ENST00000222725 SCRIBQ14160 1630 aa45.82■■■■■ 4.92
LFNG-201ENST00000222725 NACADO15069 1562 aa45.51■■■■■ 4.88
LFNG-201ENST00000222725 RSF1Q96T23 1441 aaPredicted RBP45.43■■■■■ 4.86
LFNG-201ENST00000222725 RB1CC1Q8TDY2 1594 aa45.04■■■■■ 4.8
LFNG-201ENST00000222725 CECR2Q9BXF3 1484 aa44.75■■■■■ 4.75
LFNG-201ENST00000222725 LOC105371045A0A1W2PR82 267 aa44.74■■■■■ 4.75
LFNG-201ENST00000222725 MROH2BQ7Z745 1585 aa44.66■■■■■ 4.74
LFNG-201ENST00000222725 HRCP23327 699 aa44.65■■■■■ 4.74
LFNG-201ENST00000222725 PCGF6Q9BYE7 350 aa44.58■■■■■ 4.73
LFNG-201ENST00000222725 TRIM41Q8WV44 630 aa44.46■■■■■ 4.71
LFNG-201ENST00000222725 WIZO95785 1651 aa44.42■■■■■ 4.7
LFNG-201ENST00000222725 BAZ1AQ9NRL2 1556 aaPredicted RBP44.32■■■■■ 4.69
LFNG-201ENST00000222725 UNC13AQ9UPW8 1703 aa44.04■■■■■ 4.64
LFNG-201ENST00000222725 TRIM26Q12899 539 aaPredicted RBP43.99■■■■■ 4.63
LFNG-201ENST00000222725 EIF4G1Q04637 1599 aaKnown RBP43.93■■■■■ 4.62
LFNG-201ENST00000222725 SMARCA4P51532 1647 aa43.93■■■■■ 4.62
LFNG-201ENST00000222725 TOP2AP11388 1531 aaKnown RBP43.88■■■■■ 4.62
LFNG-201ENST00000222725 FAM9AQ8IZU1 332 aaPredicted RBP43.84■■■■■ 4.61
LFNG-201ENST00000222725 SMARCA2P51531 1590 aa43.58■■■■■ 4.57
LFNG-201ENST00000222725 CCDC88BA6NC98 1476 aa43.54■■■■■ 4.56
LFNG-201ENST00000222725 BICRAQ9NZM4 1560 aa43.46■■■■■ 4.55
LFNG-201ENST00000222725 PPARGC1BQ86YN6 1023 aaKnown RBP43.46■■■■■ 4.55
LFNG-201ENST00000222725 ABCC8Q09428 1581 aa43.29■■■■■ 4.52
LFNG-201ENST00000222725 EHMT2Q96KQ7 1210 aa43.28■■■■■ 4.52
LFNG-201ENST00000222725 PEG3Q9GZU2 1588 aa43.24■■■■■ 4.51
LFNG-201ENST00000222725 PABPN1Q86U42 306 aaKnown RBP eCLIP43.16■■■■■ 4.5
LFNG-201ENST00000222725 ZEB1P37275 1124 aaPredicted RBP43.09■■■■■ 4.49
LFNG-201ENST00000222725 EEA1Q15075 1411 aa42.92■■■■■ 4.46
LFNG-201ENST00000222725 SOGA1O94964 1423 aa42.83■■■■■ 4.45
LFNG-201ENST00000222725 ATAD2BQ9ULI0 1458 aa42.78■■■■■ 4.44
LFNG-201ENST00000222725 WRNQ14191 1432 aaPredicted RBP eCLIP42.73■■■■■ 4.43
LFNG-201ENST00000222725 TNIKQ9UKE5 1360 aa42.69■■■■■ 4.42
LFNG-201ENST00000222725 CEP162Q5TB80 1403 aa42.67■■■■■ 4.42
LFNG-201ENST00000222725 BAZ1BQ9UIG0 1483 aaKnown RBP42.65■■■■■ 4.42
LFNG-201ENST00000222725 CSRNP3Q8WYN3 585 aa42.63■■■■■ 4.41
LFNG-201ENST00000222725 RUSC2Q8N2Y8 1516 aa42.59■■■■■ 4.41
LFNG-201ENST00000222725 SYNJ1O43426 1573 aa42.5■■■■■ 4.39
LFNG-201ENST00000222725 GOLGA3Q08378 1498 aa42.49■■■■■ 4.39
LFNG-201ENST00000222725 UBTFP17480 764 aaKnown RBP42.32■■■■■ 4.37
LFNG-201ENST00000222725 KIF21BO75037 1637 aa42.32■■■■■ 4.36
LFNG-201ENST00000222725 CEP164Q9UPV0 1460 aa42.29■■■■■ 4.36
LFNG-201ENST00000222725 HMGXB3Q12766 1538 aa42.12■■■■■ 4.33
LFNG-201ENST00000222725 TOP2BQ02880 1626 aa42.11■■■■■ 4.33
LFNG-201ENST00000222725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.06■■■■■ 4.32
LFNG-201ENST00000222725 NCAPD3P42695 1498 aa42.04■■■■■ 4.32
LFNG-201ENST00000222725 CCER1Q8TC90 406 aaPredicted RBP42.03■■■■■ 4.32
LFNG-201ENST00000222725 BIVM-ERCC5R4GMW8 1640 aa42.01■■■■■ 4.32
LFNG-201ENST00000222725 CLIP1P30622 1438 aa41.91■■■■■ 4.3
LFNG-201ENST00000222725 TTBK1Q5TCY1 1321 aaPredicted RBP41.91■■■■■ 4.3
LFNG-201ENST00000222725 RAPGEF2Q9Y4G8 1499 aa41.86■■■■■ 4.29
LFNG-201ENST00000222725 VPS8Q8N3P4 1428 aa41.78■■■■■ 4.28
LFNG-201ENST00000222725 ERICH3Q5RHP9 1530 aa41.69■■■■■ 4.26
LFNG-201ENST00000222725 CFTRP13569 1480 aa41.64■■■■■ 4.26
LFNG-201ENST00000222725 CUX1P39880 1505 aa41.63■■■■■ 4.25
LFNG-201ENST00000222725 PRXQ9BXM0 1461 aa41.61■■■■■ 4.25
LFNG-201ENST00000222725 PRDM2Q13029 1718 aa41.49■■■■■ 4.23
LFNG-201ENST00000222725 APLP2Q06481 763 aa41.44■■■■■ 4.23
LFNG-201ENST00000222725 KIF27Q86VH2 1401 aa41.44■■■■■ 4.22
LFNG-201ENST00000222725 ARAP1Q96P48 1450 aa41.28■■■■■ 4.2
LFNG-201ENST00000222725 RANGAP1P46060 587 aaPredicted RBP41.26■■■■■ 4.19
LFNG-201ENST00000222725 HNRNPUL2Q1KMD3 747 aaKnown RBP41.2■■■■■ 4.19
LFNG-201ENST00000222725 CADPSQ9ULU8 1353 aa41.15■■■■■ 4.18
LFNG-201ENST00000222725 DIEXFQ68CQ4 756 aaKnown RBP41.13■■■■■ 4.18
LFNG-201ENST00000222725 CUX2O14529 1486 aa40.98■■■■■ 4.15
LFNG-201ENST00000222725 CC2D2AQ9P2K1 1620 aa40.97■■■■■ 4.15
LFNG-201ENST00000222725 ARHGAP35Q9NRY4 1499 aa40.95■■■■■ 4.15
LFNG-201ENST00000222725 ZNF316A6NFI3 1004 aaPredicted RBP40.94■■■■■ 4.15
LFNG-201ENST00000222725 IGF1RP08069 1367 aa40.91■■■■■ 4.14
LFNG-201ENST00000222725 FGD5Q6ZNL6 1462 aa40.9■■■■■ 4.14
LFNG-201ENST00000222725 SCAF1Q9H7N4 1312 aaKnown RBP40.89■■■■■ 4.14
LFNG-201ENST00000222725 KANK4Q5T7N3 995 aaPredicted RBP40.84■■■■■ 4.13
LFNG-201ENST00000222725 RRBP1Q9P2E9 1410 aaKnown RBP40.81■■■■■ 4.12
LFNG-201ENST00000222725 CARMIL1Q5VZK9 1371 aa40.74■■■■■ 4.11
LFNG-201ENST00000222725 CLSPNQ9HAW4 1339 aa40.74■■■■■ 4.11
LFNG-201ENST00000222725 FANCD2Q9BXW9 1451 aa40.74■■■■■ 4.11
LFNG-201ENST00000222725 ACIN1Q9UKV3 1341 aaKnown RBP40.7■■■■■ 4.11
LFNG-201ENST00000222725 MAP3K1Q13233 1512 aa40.65■■■■■ 4.1
LFNG-201ENST00000222725 DNMBPQ6XZF7 1577 aa40.64■■■■■ 4.1
LFNG-201ENST00000222725 DHX57Q6P158 1386 aaKnown RBP40.61■■■■■ 4.09
LFNG-201ENST00000222725 CENPBP07199 599 aaPredicted RBP40.59■■■■■ 4.09
LFNG-201ENST00000222725 CCNB3Q8WWL7 1395 aa40.58■■■■■ 4.09
LFNG-201ENST00000222725 TIAM1Q13009 1591 aa40.56■■■■■ 4.08
LFNG-201ENST00000222725 NEUROD1Q13562 356 aa40.55■■■■■ 4.08
LFNG-201ENST00000222725 ABCA10Q8WWZ4 1543 aa40.52■■■■■ 4.08
LFNG-201ENST00000222725 TOPBP1Q92547 1522 aa40.48■■■■■ 4.07
LFNG-201ENST00000222725 POLA1P09884 1462 aaPredicted RBP40.45■■■■■ 4.07
LFNG-201ENST00000222725 FHAD1B1AJZ9 1412 aa40.43■■■■■ 4.06
LFNG-201ENST00000222725 RAD54L2Q9Y4B4 1467 aa40.39■■■■■ 4.06
LFNG-201ENST00000222725 CUL7Q14999 1698 aa40.37■■■■■ 4.05
LFNG-201ENST00000222725 LRRC9Q6ZRR7 1453 aa40.36■■■■■ 4.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms