RNA–Protein interactions for RNA: ENST00000295082.2

KCNF1-201, Transcript of potassium voltage-gated channel modifier subfamily F member 1, humanhuman

APPRIS P1 BASIC

Gene KCNF1, Length 2,289 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1-201ENST00000295082 NISCHQ9Y2I1 1504 aa54.63■■■■■ 6.34
KCNF1-201ENST00000295082 SHROOM4Q9ULL8 1493 aa46.93■■■■■ 5.1
KCNF1-201ENST00000295082 ZCCHC6Q5VYS8 1495 aaKnown RBP46.34■■■■■ 5.01
KCNF1-201ENST00000295082 SUPT5HO00267 1087 aaKnown RBP46.33■■■■■ 5.01
KCNF1-201ENST00000295082 CCDC180Q9P1Z9 1646 aa46.21■■■■■ 4.99
KCNF1-201ENST00000295082 CHIC1Q5VXU3 224 aa45.38■■■■■ 4.85
KCNF1-201ENST00000295082 MYO15BQ96JP2 1530 aa45.33■■■■■ 4.85
KCNF1-201ENST00000295082 DCAF8L2P0C7V8 631 aa45.05■■■■■ 4.8
KCNF1-201ENST00000295082 HRCP23327 699 aa45.04■■■■■ 4.8
KCNF1-201ENST00000295082 DCAF1Q9Y4B6 1507 aa44.87■■■■■ 4.77
KCNF1-201ENST00000295082 PCGF6Q9BYE7 350 aa44.55■■■■■ 4.72
KCNF1-201ENST00000295082 LOC105371045A0A1W2PR82 267 aa44.02■■■■■ 4.64
KCNF1-201ENST00000295082 PPARGC1BQ86YN6 1023 aaKnown RBP43.9■■■■■ 4.62
KCNF1-201ENST00000295082 ABCC9O60706 1549 aa43.84■■■■■ 4.61
KCNF1-201ENST00000295082 TRIM26Q12899 539 aaPredicted RBP43.65■■■■■ 4.58
KCNF1-201ENST00000295082 RSF1Q96T23 1441 aaPredicted RBP43.46■■■■■ 4.55
KCNF1-201ENST00000295082 SCRIBQ14160 1630 aa43.36■■■■■ 4.53
KCNF1-201ENST00000295082 TRIM41Q8WV44 630 aa43.15■■■■■ 4.5
KCNF1-201ENST00000295082 RB1CC1Q8TDY2 1594 aa43.12■■■■■ 4.49
KCNF1-201ENST00000295082 ZEB1P37275 1124 aaPredicted RBP43.02■■■■■ 4.48
KCNF1-201ENST00000295082 FAM9AQ8IZU1 332 aaPredicted RBP42.76■■■■■ 4.44
KCNF1-201ENST00000295082 NACADO15069 1562 aa42.58■■■■■ 4.41
KCNF1-201ENST00000295082 CECR2Q9BXF3 1484 aa42.54■■■■■ 4.4
KCNF1-201ENST00000295082 MROH2BQ7Z745 1585 aa42.48■■■■■ 4.39
KCNF1-201ENST00000295082 EHMT2Q96KQ7 1210 aa42.34■■■■■ 4.37
KCNF1-201ENST00000295082 WIZO95785 1651 aa42.3■■■■■ 4.36
KCNF1-201ENST00000295082 BAZ1AQ9NRL2 1556 aaPredicted RBP42.12■■■■■ 4.33
KCNF1-201ENST00000295082 EIF4G1Q04637 1599 aaKnown RBP42.02■■■■■ 4.32
KCNF1-201ENST00000295082 SCAF1Q9H7N4 1312 aaKnown RBP41.83■■■■■ 4.29
KCNF1-201ENST00000295082 PELP1Q8IZL8 1130 aaKnown RBP41.83■■■■■ 4.29
KCNF1-201ENST00000295082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.7■■■■■ 4.27
KCNF1-201ENST00000295082 CCER1Q8TC90 406 aaPredicted RBP41.69■■■■■ 4.26
KCNF1-201ENST00000295082 TOP2AP11388 1531 aaKnown RBP41.67■■■■■ 4.26
KCNF1-201ENST00000295082 WRNQ14191 1432 aaPredicted RBP eCLIP41.58■■■■■ 4.25
KCNF1-201ENST00000295082 ABCC8Q09428 1581 aa41.55■■■■■ 4.24
KCNF1-201ENST00000295082 CCDC88BA6NC98 1476 aa41.52■■■■■ 4.24
KCNF1-201ENST00000295082 SMARCA4P51532 1647 aa41.49■■■■■ 4.23
KCNF1-201ENST00000295082 SMARCA2P51531 1590 aa41.45■■■■■ 4.23
KCNF1-201ENST00000295082 CEP162Q5TB80 1403 aa41.41■■■■■ 4.22
KCNF1-201ENST00000295082 TNIKQ9UKE5 1360 aa41.34■■■■■ 4.21
KCNF1-201ENST00000295082 ACIN1Q9UKV3 1341 aaKnown RBP41.29■■■■■ 4.2
KCNF1-201ENST00000295082 SOGA1O94964 1423 aa41.28■■■■■ 4.2
KCNF1-201ENST00000295082 EEA1Q15075 1411 aa41.27■■■■■ 4.2
KCNF1-201ENST00000295082 DIEXFQ68CQ4 756 aaKnown RBP41.21■■■■■ 4.19
KCNF1-201ENST00000295082 TTBK1Q5TCY1 1321 aaPredicted RBP41.16■■■■■ 4.18
KCNF1-201ENST00000295082 CSRNP3Q8WYN3 585 aa41.14■■■■■ 4.18
KCNF1-201ENST00000295082 UNC13AQ9UPW8 1703 aa41.13■■■■■ 4.18
KCNF1-201ENST00000295082 NEUROD1Q13562 356 aa41.13■■■■■ 4.17
KCNF1-201ENST00000295082 RUSC2Q8N2Y8 1516 aa41.03■■■■■ 4.16
KCNF1-201ENST00000295082 UBTFP17480 764 aaKnown RBP41.01■■■■■ 4.16
KCNF1-201ENST00000295082 CENPBP07199 599 aaPredicted RBP41.01■■■■■ 4.16
KCNF1-201ENST00000295082 GOLGA3Q08378 1498 aa40.99■■■■■ 4.15
KCNF1-201ENST00000295082 GTF3C3Q9Y5Q9 886 aa40.79■■■■■ 4.12
KCNF1-201ENST00000295082 ZNF316A6NFI3 1004 aaPredicted RBP40.78■■■■■ 4.12
KCNF1-201ENST00000295082 CEP164Q9UPV0 1460 aa40.69■■■■■ 4.1
KCNF1-201ENST00000295082 PEG3Q9GZU2 1588 aa40.68■■■■■ 4.1
KCNF1-201ENST00000295082 KIF21BO75037 1637 aa40.66■■■■■ 4.1
KCNF1-201ENST00000295082 SYNJ1O43426 1573 aa40.58■■■■■ 4.09
KCNF1-201ENST00000295082 BICRAQ9NZM4 1560 aa40.57■■■■■ 4.09
KCNF1-201ENST00000295082 CLIP1P30622 1438 aa40.52■■■■■ 4.08
KCNF1-201ENST00000295082 PABPN1Q86U42 306 aaKnown RBP eCLIP40.49■■■■■ 4.07
KCNF1-201ENST00000295082 HNRNPUL2Q1KMD3 747 aaKnown RBP40.45■■■■■ 4.07
KCNF1-201ENST00000295082 VPS8Q8N3P4 1428 aa40.44■■■■■ 4.06
KCNF1-201ENST00000295082 BAZ1BQ9UIG0 1483 aaKnown RBP40.42■■■■■ 4.06
KCNF1-201ENST00000295082 APLP2Q06481 763 aa40.29■■■■■ 4.04
KCNF1-201ENST00000295082 ATAD2BQ9ULI0 1458 aa40.27■■■■■ 4.04
KCNF1-201ENST00000295082 RAPGEF2Q9Y4G8 1499 aa40.26■■■■■ 4.04
KCNF1-201ENST00000295082 MIER1Q8N108 512 aa40.22■■■■■ 4.03
KCNF1-201ENST00000295082 YTHDC1Q96MU7 727 aaKnown RBP40.21■■■■■ 4.03
KCNF1-201ENST00000295082 TOP2BQ02880 1626 aa40.06■■■■■ 4
KCNF1-201ENST00000295082 RANGAP1P46060 587 aaPredicted RBP39.96■■■■□ 3.99
KCNF1-201ENST00000295082 CLSPNQ9HAW4 1339 aa39.93■■■■□ 3.98
KCNF1-201ENST00000295082 BIVM-ERCC5R4GMW8 1640 aa39.92■■■■□ 3.98
KCNF1-201ENST00000295082 ERICH3Q5RHP9 1530 aa39.91■■■■□ 3.98
KCNF1-201ENST00000295082 MYT1Q01538 1121 aa39.9■■■■□ 3.98
KCNF1-201ENST00000295082 PRXQ9BXM0 1461 aa39.83■■■■□ 3.97
KCNF1-201ENST00000295082 ARAP1Q96P48 1450 aa39.79■■■■□ 3.96
KCNF1-201ENST00000295082 DHX57Q6P158 1386 aaKnown RBP39.79■■■■□ 3.96
KCNF1-201ENST00000295082 KANK4Q5T7N3 995 aaPredicted RBP39.63■■■■□ 3.93
KCNF1-201ENST00000295082 RRBP1Q9P2E9 1410 aaKnown RBP39.6■■■■□ 3.93
KCNF1-201ENST00000295082 KIF27Q86VH2 1401 aa39.52■■■■□ 3.92
KCNF1-201ENST00000295082 CUX1P39880 1505 aa39.52■■■■□ 3.92
KCNF1-201ENST00000295082 CUX2O14529 1486 aa39.48■■■■□ 3.91
KCNF1-201ENST00000295082 HMGXB3Q12766 1538 aa39.44■■■■□ 3.9
KCNF1-201ENST00000295082 CCNB3Q8WWL7 1395 aa39.39■■■■□ 3.9
KCNF1-201ENST00000295082 NCAPD3P42695 1498 aa39.39■■■■□ 3.9
KCNF1-201ENST00000295082 ARHGAP35Q9NRY4 1499 aa39.35■■■■□ 3.89
KCNF1-201ENST00000295082 CFTRP13569 1480 aa39.25■■■■□ 3.87
KCNF1-201ENST00000295082 SUPT16HQ9Y5B9 1047 aaKnown RBP39.18■■■■□ 3.86
KCNF1-201ENST00000295082 ITGAEP38570 1179 aa39.12■■■■□ 3.85
KCNF1-201ENST00000295082 MAP3K1Q13233 1512 aa39.1■■■■□ 3.85
KCNF1-201ENST00000295082 RAB3GAP2Q9H2M9 1393 aa39.09■■■■□ 3.85
KCNF1-201ENST00000295082 TIAM1Q13009 1591 aa39.06■■■■□ 3.84
KCNF1-201ENST00000295082 MAPKBP1O60336 1514 aa39.04■■■■□ 3.84
KCNF1-201ENST00000295082 IGF1RP08069 1367 aa39.01■■■■□ 3.83
KCNF1-201ENST00000295082 PRDM2Q13029 1718 aa39■■■■□ 3.83
KCNF1-201ENST00000295082 SETD5Q9C0A6 1442 aa38.94■■■■□ 3.82
KCNF1-201ENST00000295082 LRRC9Q6ZRR7 1453 aa38.9■■■■□ 3.82
KCNF1-201ENST00000295082 CARMIL1Q5VZK9 1371 aa38.87■■■■□ 3.81
KCNF1-201ENST00000295082 PHLDB1Q86UU1 1377 aa38.8■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms