RNA–Protein interactions for RNA: ENST00000343225.4

SLC12A2-202, Transcript of solute carrier family 12 member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC12A2, Length 5,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A2-202ENST00000343225 DCAF8L2P0C7V8 631 aa43.18■■■■■ 4.5
SLC12A2-202ENST00000343225 NISCHQ9Y2I1 1504 aa41.68■■■■■ 4.26
SLC12A2-202ENST00000343225 SUPT5HO00267 1087 aaKnown RBP41.15■■■■■ 4.18
SLC12A2-202ENST00000343225 SHROOM4Q9ULL8 1493 aa40.3■■■■■ 4.04
SLC12A2-202ENST00000343225 PELP1Q8IZL8 1130 aaKnown RBP39.78■■■■□ 3.96
SLC12A2-202ENST00000343225 APLP2Q06481 763 aa39.58■■■■□ 3.93
SLC12A2-202ENST00000343225 EHMT2Q96KQ7 1210 aa39.49■■■■□ 3.91
SLC12A2-202ENST00000343225 FAM9AQ8IZU1 332 aaPredicted RBP39.09■■■■□ 3.85
SLC12A2-202ENST00000343225 ZEB1P37275 1124 aaPredicted RBP38.53■■■■□ 3.76
SLC12A2-202ENST00000343225 PCGF6Q9BYE7 350 aa38.49■■■■□ 3.75
SLC12A2-202ENST00000343225 TRIM41Q8WV44 630 aa38.36■■■■□ 3.73
SLC12A2-202ENST00000343225 TTBK1Q5TCY1 1321 aaPredicted RBP38.27■■■■□ 3.72
SLC12A2-202ENST00000343225 CENPBP07199 599 aaPredicted RBP38.26■■■■□ 3.72
SLC12A2-202ENST00000343225 CCER1Q8TC90 406 aaPredicted RBP38.06■■■■□ 3.68
SLC12A2-202ENST00000343225 RANGAP1P46060 587 aaPredicted RBP37.93■■■■□ 3.66
SLC12A2-202ENST00000343225 UBTFP17480 764 aaKnown RBP37.87■■■■□ 3.65
SLC12A2-202ENST00000343225 ERICH6Q7L0X2 663 aa37.83■■■■□ 3.65
SLC12A2-202ENST00000343225 ATP1B4Q9UN42 357 aaPredicted RBP37.81■■■■□ 3.64
SLC12A2-202ENST00000343225 MYT1Q01538 1121 aa37.68■■■■□ 3.62
SLC12A2-202ENST00000343225 NEFLP07196 543 aa37.46■■■■□ 3.59
SLC12A2-202ENST00000343225 TRIM26Q12899 539 aaPredicted RBP37.2■■■■□ 3.55
SLC12A2-202ENST00000343225 YTHDC1Q96MU7 727 aaKnown RBP36.98■■■■□ 3.51
SLC12A2-202ENST00000343225 PPARGC1BQ86YN6 1023 aaKnown RBP36.79■■■■□ 3.48
SLC12A2-202ENST00000343225 HRCP23327 699 aa36.65■■■■□ 3.46
SLC12A2-202ENST00000343225 CHIC1Q5VXU3 224 aa36.57■■■■□ 3.45
SLC12A2-202ENST00000343225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.54■■■■□ 3.44
SLC12A2-202ENST00000343225 HNRNPUL2Q1KMD3 747 aaKnown RBP36.54■■■■□ 3.44
SLC12A2-202ENST00000343225 ITGAEP38570 1179 aa36.48■■■■□ 3.43
SLC12A2-202ENST00000343225 MYT1LQ9UL68 1186 aa36.43■■■■□ 3.42
SLC12A2-202ENST00000343225 DAXXQ9UER7 740 aaPredicted RBP36.35■■■■□ 3.41
SLC12A2-202ENST00000343225 LOC105371045A0A1W2PR82 267 aa36.34■■■■□ 3.41
SLC12A2-202ENST00000343225 POLR3GLQ9BT43 218 aa36.26■■■■□ 3.39
SLC12A2-202ENST00000343225 DIEXFQ68CQ4 756 aaKnown RBP35.8■■■■□ 3.32
SLC12A2-202ENST00000343225 FAM50AQ14320 339 aaKnown RBP35.75■■■■□ 3.31
SLC12A2-202ENST00000343225 ABCC9O60706 1549 aa35.64■■■■□ 3.3
SLC12A2-202ENST00000343225 SLC4A1APQ9BWU0 796 aaKnown RBP35.64■■■■□ 3.3
SLC12A2-202ENST00000343225 CNGB1Q14028 1251 aaPredicted RBP35.63■■■■□ 3.29
SLC12A2-202ENST00000343225 TRIM52Q96A61 297 aa35.6■■■■□ 3.29
SLC12A2-202ENST00000343225 PABPN1Q86U42 306 aaKnown RBP eCLIP35.5■■■■□ 3.27
SLC12A2-202ENST00000343225 ZNF316A6NFI3 1004 aaPredicted RBP35.48■■■■□ 3.27
SLC12A2-202ENST00000343225 RTL5Q5HYW3 569 aaPredicted RBP35.47■■■■□ 3.27
SLC12A2-202ENST00000343225 CLSPNQ9HAW4 1339 aa35.46■■■■□ 3.27
SLC12A2-202ENST00000343225 NEUROD1Q13562 356 aa35.35■■■■□ 3.25
SLC12A2-202ENST00000343225 ANP32CO43423 234 aa35.31■■■■□ 3.24
SLC12A2-202ENST00000343225 CSRNP3Q8WYN3 585 aa35.03■■■■□ 3.2
SLC12A2-202ENST00000343225 ZNF326Q5BKZ1 582 aaKnown RBP35.03■■■■□ 3.2
SLC12A2-202ENST00000343225 CDK11AQ9UQ88 783 aaPredicted RBP34.99■■■■□ 3.19
SLC12A2-202ENST00000343225 ZBTB47Q9UFB7 747 aaPredicted RBP34.98■■■■□ 3.19
SLC12A2-202ENST00000343225 FBLN2P98095 1184 aa34.93■■■■□ 3.18
SLC12A2-202ENST00000343225 GTF3C3Q9Y5Q9 886 aa34.93■■■■□ 3.18
SLC12A2-202ENST00000343225 BCANQ96GW7 911 aa34.8■■■■□ 3.16
SLC12A2-202ENST00000343225 NEFMP07197 916 aa34.78■■■■□ 3.16
SLC12A2-202ENST00000343225 CANXP27824 592 aaKnown RBP34.73■■■■□ 3.15
SLC12A2-202ENST00000343225 P3H3Q8IVL6 736 aa34.67■■■■□ 3.14
SLC12A2-202ENST00000343225 ACIN1Q9UKV3 1341 aaKnown RBP34.54■■■■□ 3.12
SLC12A2-202ENST00000343225 SCRIBQ14160 1630 aa34.53■■■■□ 3.12
SLC12A2-202ENST00000343225 ZCCHC6Q5VYS8 1495 aaKnown RBP34.51■■■■□ 3.12
SLC12A2-202ENST00000343225 ZNF777Q9ULD5 760 aaPredicted RBP34.51■■■■□ 3.11
SLC12A2-202ENST00000343225 DCAF1Q9Y4B6 1507 aa34.47■■■■□ 3.11
SLC12A2-202ENST00000343225 TONSLQ96HA7 1378 aa34.46■■■■□ 3.11
SLC12A2-202ENST00000343225 ANP32AP39687 249 aaKnown RBP34.44■■■■□ 3.1
SLC12A2-202ENST00000343225 ARID3CA6NKF2 412 aa34.43■■■■□ 3.1
SLC12A2-202ENST00000343225 SLC24A1O60721 1099 aa34.35■■■■□ 3.09
SLC12A2-202ENST00000343225 ESF1Q9H501 851 aaKnown RBP34.23■■■■□ 3.07
SLC12A2-202ENST00000343225 CCDC180Q9P1Z9 1646 aa34.16■■■■□ 3.06
SLC12A2-202ENST00000343225 NPM1P06748 294 aaKnown RBP eCLIP34.08■■■■□ 3.05
SLC12A2-202ENST00000343225 STAG3Q9UJ98 1225 aa34.05■■■■□ 3.04
SLC12A2-202ENST00000343225 BCL11AQ9H165 835 aa34.05■■■■□ 3.04
SLC12A2-202ENST00000343225 HNRNPUQ00839 825 aaKnown RBP eCLIP34.03■■■■□ 3.04
SLC12A2-202ENST00000343225 FKBP8Q14318 412 aa34.02■■■■□ 3.04
SLC12A2-202ENST00000343225 UPF2Q9HAU5 1272 aaKnown RBP34.01■■■■□ 3.04
SLC12A2-202ENST00000343225 CHGAP10645 457 aaKnown RBP34■■■■□ 3.03
SLC12A2-202ENST00000343225 NPM2Q86SE8 214 aaKnown RBP33.96■■■■□ 3.03
SLC12A2-202ENST00000343225 DDX10Q13206 875 aaKnown RBP33.96■■■■□ 3.03
SLC12A2-202ENST00000343225 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.93■■■■□ 3.02
SLC12A2-202ENST00000343225 ANP32BQ92688 251 aaKnown RBP33.93■■■■□ 3.02
SLC12A2-202ENST00000343225 MTUS2Q5JR59 1369 aa33.91■■■■□ 3.02
SLC12A2-202ENST00000343225 TSPY4P0CV99 314 aa33.9■■■■□ 3.02
SLC12A2-202ENST00000343225 TSPY10P0CW01 314 aa33.9■■■■□ 3.02
SLC12A2-202ENST00000343225 FAM9BQ8IZU0 186 aa33.9■■■■□ 3.02
SLC12A2-202ENST00000343225 EEA1Q15075 1411 aa33.88■■■■□ 3.01
SLC12A2-202ENST00000343225 TMC1Q8TDI8 760 aa33.87■■■■□ 3.01
SLC12A2-202ENST00000343225 HSP90AA1P07900 732 aaKnown RBP33.85■■■■□ 3.01
SLC12A2-202ENST00000343225 CLIP1P30622 1438 aa33.84■■■■□ 3.01
SLC12A2-202ENST00000343225 CHIC2Q9UKJ5 165 aa33.82■■■■□ 3
SLC12A2-202ENST00000343225 WDR43Q15061 677 aaKnown RBP eCLIP33.78■■■■□ 3
SLC12A2-202ENST00000343225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.73■■■□□ 2.99
SLC12A2-202ENST00000343225 RB1CC1Q8TDY2 1594 aa33.72■■■□□ 2.99
SLC12A2-202ENST00000343225 RSF1Q96T23 1441 aaPredicted RBP33.72■■■□□ 2.99
SLC12A2-202ENST00000343225 CCDC136Q96JN2 1154 aa33.72■■■□□ 2.99
SLC12A2-202ENST00000343225 GOLGA3Q08378 1498 aa33.69■■■□□ 2.98
SLC12A2-202ENST00000343225 MRS2Q9HD23 443 aa33.68■■■□□ 2.98
SLC12A2-202ENST00000343225 CHMP7Q8WUX9 453 aaPredicted RBP33.66■■■□□ 2.98
SLC12A2-202ENST00000343225 EIF4G2P78344 907 aaKnown RBP eCLIP33.61■■■□□ 2.97
SLC12A2-202ENST00000343225 SALL2Q9Y467 1007 aaPredicted RBP33.55■■■□□ 2.96
SLC12A2-202ENST00000343225 KDM2AQ9Y2K7 1162 aa33.55■■■□□ 2.96
SLC12A2-202ENST00000343225 CEP162Q5TB80 1403 aa33.48■■■□□ 2.95
SLC12A2-202ENST00000343225 EIF5BO60841 1220 aaKnown RBP33.45■■■□□ 2.95
SLC12A2-202ENST00000343225 MYH16Q9H6N6 1097 aa33.43■■■□□ 2.94
SLC12A2-202ENST00000343225 PLEKHD1A6NEE1 506 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms