RNA–Protein interactions for RNA: ENST00000431519.6

CDV3-203, Transcript of CDV3 homolog, humanhuman

TSL 1 (best) BASIC

Gene CDV3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-203ENST00000431519 NISCHQ9Y2I1 1504 aa76.88■■■■■ 9.9
CDV3-203ENST00000431519 CCDC180Q9P1Z9 1646 aa68.78■■■■■ 8.6
CDV3-203ENST00000431519 ABCC9O60706 1549 aa68.57■■■■■ 8.57
CDV3-203ENST00000431519 RB1CC1Q8TDY2 1594 aa65.34■■■■■ 8.05
CDV3-203ENST00000431519 NACADO15069 1562 aa64.95■■■■■ 7.99
CDV3-203ENST00000431519 DCAF8L2P0C7V8 631 aa64.91■■■■■ 7.98
CDV3-203ENST00000431519 MYO15BQ96JP2 1530 aa64.08■■■■■ 7.85
CDV3-203ENST00000431519 DNAJC5BQ9UF47 199 aa63.97■■■■■ 7.83
CDV3-203ENST00000431519 PABPN1Q86U42 306 aaKnown RBP eCLIP63.94■■■■■ 7.83
CDV3-203ENST00000431519 UNC13AQ9UPW8 1703 aa63.9■■■■■ 7.82
CDV3-203ENST00000431519 ZCCHC6Q5VYS8 1495 aaKnown RBP63.78■■■■■ 7.8
CDV3-203ENST00000431519 DCAF1Q9Y4B6 1507 aa63.43■■■■■ 7.74
CDV3-203ENST00000431519 BICRAQ9NZM4 1560 aa63.43■■■■■ 7.74
CDV3-203ENST00000431519 SCRIBQ14160 1630 aa62.84■■■■■ 7.65
CDV3-203ENST00000431519 SHROOM4Q9ULL8 1493 aa62.49■■■■■ 7.59
CDV3-203ENST00000431519 CC2D2AQ9P2K1 1620 aa61.91■■■■■ 7.5
CDV3-203ENST00000431519 EIF4G1Q04637 1599 aaKnown RBP61.86■■■■■ 7.49
CDV3-203ENST00000431519 CECR2Q9BXF3 1484 aa61.68■■■■■ 7.47
CDV3-203ENST00000431519 NCAPD3P42695 1498 aa59.95■■■■■ 7.19
CDV3-203ENST00000431519 SMARCA4P51532 1647 aa59.91■■■■■ 7.18
CDV3-203ENST00000431519 ATAD2BQ9ULI0 1458 aa59.87■■■■■ 7.17
CDV3-203ENST00000431519 SMARCA2P51531 1590 aa59.69■■■■■ 7.15
CDV3-203ENST00000431519 BAZ1AQ9NRL2 1556 aaPredicted RBP59.65■■■■■ 7.14
CDV3-203ENST00000431519 HMGXB3Q12766 1538 aa59.54■■■■■ 7.12
CDV3-203ENST00000431519 BAZ1BQ9UIG0 1483 aaKnown RBP59.34■■■■■ 7.09
CDV3-203ENST00000431519 MROH2BQ7Z745 1585 aa59.29■■■■■ 7.08
CDV3-203ENST00000431519 PEG3Q9GZU2 1588 aa59.25■■■■■ 7.08
CDV3-203ENST00000431519 ERCC6Q03468 1493 aa59.17■■■■■ 7.06
CDV3-203ENST00000431519 NESP48681 1621 aa59.01■■■■■ 7.04
CDV3-203ENST00000431519 CUX2O14529 1486 aa58.84■■■■■ 7.01
CDV3-203ENST00000431519 WIZO95785 1651 aa58.62■■■■■ 6.97
CDV3-203ENST00000431519 LAMC3Q9Y6N6 1575 aa58.56■■■■■ 6.97
CDV3-203ENST00000431519 DNAJC5Q9H3Z4 198 aa58.4■■■■■ 6.94
CDV3-203ENST00000431519 THOC2Q8NI27 1593 aaKnown RBP58.28■■■■■ 6.92
CDV3-203ENST00000431519 KIF21AQ7Z4S6 1674 aa58.24■■■■■ 6.91
CDV3-203ENST00000431519 PDS5BQ9NTI5 1447 aa58.22■■■■■ 6.91
CDV3-203ENST00000431519 CADPSQ9ULU8 1353 aa58.18■■■■■ 6.9
CDV3-203ENST00000431519 RSF1Q96T23 1441 aaPredicted RBP58.17■■■■■ 6.9
CDV3-203ENST00000431519 TOP2AP11388 1531 aaKnown RBP57.85■■■■■ 6.85
CDV3-203ENST00000431519 MRC2Q9UBG0 1479 aa57.73■■■■■ 6.83
CDV3-203ENST00000431519 CEP164Q9UPV0 1460 aa57.59■■■■■ 6.81
CDV3-203ENST00000431519 CFTRP13569 1480 aa57.58■■■■■ 6.81
CDV3-203ENST00000431519 FANCD2Q9BXW9 1451 aa57.56■■■■■ 6.81
CDV3-203ENST00000431519 WDR62O43379 1518 aa57.55■■■■■ 6.8
CDV3-203ENST00000431519 CCDC88BA6NC98 1476 aa57.22■■■■■ 6.75
CDV3-203ENST00000431519 URB2Q14146 1524 aaKnown RBP57.06■■■■■ 6.73
CDV3-203ENST00000431519 PRDM2Q13029 1718 aa57.05■■■■■ 6.72
CDV3-203ENST00000431519 TOPBP1Q92547 1522 aa56.5■■■■■ 6.64
CDV3-203ENST00000431519 IFT140Q96RY7 1462 aa56.39■■■■■ 6.62
CDV3-203ENST00000431519 ABCC8Q09428 1581 aa56.33■■■■■ 6.61
CDV3-203ENST00000431519 ZNF608Q9ULD9 1512 aaPredicted RBP56.33■■■■■ 6.61
CDV3-203ENST00000431519 DNMBPQ6XZF7 1577 aa56.32■■■■■ 6.61
CDV3-203ENST00000431519 OSCARQ8IYS5 282 aa56.25■■■■■ 6.6
CDV3-203ENST00000431519 TRIM41Q8WV44 630 aa56.16■■■■■ 6.58
CDV3-203ENST00000431519 EIF4G3O43432 1585 aaKnown RBP56.02■■■■■ 6.56
CDV3-203ENST00000431519 SUPT5HO00267 1087 aaKnown RBP56.01■■■■■ 6.56
CDV3-203ENST00000431519 TARBP1Q13395 1621 aaKnown RBP55.96■■■■■ 6.55
CDV3-203ENST00000431519 POLA1P09884 1462 aaPredicted RBP55.95■■■■■ 6.55
CDV3-203ENST00000431519 AQRO60306 1485 aaKnown RBP eCLIP55.87■■■■■ 6.532e-11■■■□□ 16.1
CDV3-203ENST00000431519 RAD54L2Q9Y4B4 1467 aa55.79■■■■■ 6.52
CDV3-203ENST00000431519 SOGA1O94964 1423 aa55.72■■■■■ 6.51
CDV3-203ENST00000431519 CUX1P39880 1505 aa55.68■■■■■ 6.5
CDV3-203ENST00000431519 FGD5Q6ZNL6 1462 aa55.68■■■■■ 6.5
CDV3-203ENST00000431519 TDRD9Q8NDG6 1382 aaKnown RBP55.59■■■■■ 6.49
CDV3-203ENST00000431519 CHD1O14646 1710 aa55.55■■■■■ 6.48
CDV3-203ENST00000431519 RIMBP3CA6NJZ7 1639 aa55.51■■■■■ 6.48
CDV3-203ENST00000431519 RIMBP3BA6NNM3 1639 aa55.51■■■■■ 6.48
CDV3-203ENST00000431519 RIMBP3Q9UFD9 1639 aa55.51■■■■■ 6.48
CDV3-203ENST00000431519 FBLN2P98095 1184 aa55.5■■■■■ 6.48
CDV3-203ENST00000431519 ARHGEF11O15085 1522 aa55.37■■■■■ 6.45
CDV3-203ENST00000431519 WDR97A6NE52 1622 aa55.33■■■■■ 6.45
CDV3-203ENST00000431519 SNAPC4Q5SXM2 1469 aa55.3■■■■■ 6.44
CDV3-203ENST00000431519 GRIN2BQ13224 1484 aa55.17■■■■■ 6.42
CDV3-203ENST00000431519 MAGI1Q96QZ7 1491 aaPredicted RBP55.11■■■■■ 6.41
CDV3-203ENST00000431519 CHMP7Q8WUX9 453 aaPredicted RBP55.07■■■■■ 6.41
CDV3-203ENST00000431519 GAPVD1Q14C86 1478 aa55.04■■■■■ 6.4
CDV3-203ENST00000431519 ABCA10Q8WWZ4 1543 aa55.01■■■■■ 6.4
CDV3-203ENST00000431519 PBRM1Q86U86 1689 aa55.01■■■■■ 6.4
CDV3-203ENST00000431519 CYB5RLQ6IPT4 315 aa54.99■■■■■ 6.39
CDV3-203ENST00000431519 SYNJ2O15056 1496 aa54.93■■■■■ 6.38
CDV3-203ENST00000431519 ABCA5Q8WWZ7 1642 aa54.92■■■■■ 6.38
CDV3-203ENST00000431519 WRNQ14191 1432 aaPredicted RBP eCLIP54.88■■■■■ 6.38
CDV3-203ENST00000431519 SYNJ1O43426 1573 aa54.88■■■■■ 6.38
CDV3-203ENST00000431519 CLASP1Q7Z460 1538 aa54.86■■■■■ 6.37
CDV3-203ENST00000431519 ARAP1Q96P48 1450 aa54.86■■■■■ 6.37
CDV3-203ENST00000431519 TOP2BQ02880 1626 aa54.85■■■■■ 6.37
CDV3-203ENST00000431519 BIVM-ERCC5R4GMW8 1640 aa54.85■■■■■ 6.37
CDV3-203ENST00000431519 ADAMTS12P58397 1594 aa54.5■■■■■ 6.31
CDV3-203ENST00000431519 GRIN2AQ12879 1464 aa54.47■■■■■ 6.31
CDV3-203ENST00000431519 FHAD1B1AJZ9 1412 aa54.34■■■■■ 6.29
CDV3-203ENST00000431519 ERICH3Q5RHP9 1530 aa54.32■■■■■ 6.29
CDV3-203ENST00000431519 TRHP20396 242 aaPredicted RBP54.29■■■■■ 6.28
CDV3-203ENST00000431519 CEP170Q5SW79 1584 aa54.28■■■■■ 6.28
CDV3-203ENST00000431519 NUP160Q12769 1436 aa54.24■■■■■ 6.27
CDV3-203ENST00000431519 ERCC6L2Q5T890 1561 aa54.12■■■■■ 6.25
CDV3-203ENST00000431519 SHROOM2Q13796 1616 aa53.95■■■■■ 6.23
CDV3-203ENST00000431519 KIF27Q86VH2 1401 aa53.81■■■■■ 6.2
CDV3-203ENST00000431519 PRG4Q92954 1404 aaPredicted RBP53.75■■■■■ 6.19
CDV3-203ENST00000431519 IGF1RP08069 1367 aa53.74■■■■■ 6.19
CDV3-203ENST00000431519 JPH4Q96JJ6 628 aa53.72■■■■■ 6.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms