RNA–Protein interactions for RNA: ENST00000381756.9

GGA1-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene GGA1, Length 2,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-204ENST00000381756 NISCHQ9Y2I1 1504 aa51.74■■■■■ 5.87
GGA1-204ENST00000381756 HRCP23327 699 aa45.04■■■■■ 4.8
GGA1-204ENST00000381756 SHROOM4Q9ULL8 1493 aa44.64■■■■■ 4.74
GGA1-204ENST00000381756 SUPT5HO00267 1087 aaKnown RBP44.45■■■■■ 4.71
GGA1-204ENST00000381756 MYO15BQ96JP2 1530 aa44.15■■■■■ 4.66
GGA1-204ENST00000381756 ZCCHC6Q5VYS8 1495 aaKnown RBP44.07■■■■■ 4.65
GGA1-204ENST00000381756 CHIC1Q5VXU3 224 aa44.06■■■■■ 4.64
GGA1-204ENST00000381756 PCGF6Q9BYE7 350 aa43.88■■■■■ 4.62
GGA1-204ENST00000381756 DCAF1Q9Y4B6 1507 aa43.74■■■■■ 4.59
GGA1-204ENST00000381756 CCDC180Q9P1Z9 1646 aa43.51■■■■■ 4.56
GGA1-204ENST00000381756 PPARGC1BQ86YN6 1023 aaKnown RBP43.51■■■■■ 4.56
GGA1-204ENST00000381756 PELP1Q8IZL8 1130 aaKnown RBP43.43■■■■■ 4.54
GGA1-204ENST00000381756 TRIM26Q12899 539 aaPredicted RBP43■■■■■ 4.47
GGA1-204ENST00000381756 ZEB1P37275 1124 aaPredicted RBP42.84■■■■■ 4.45
GGA1-204ENST00000381756 LOC105371045A0A1W2PR82 267 aa42.61■■■■■ 4.41
GGA1-204ENST00000381756 SCAF1Q9H7N4 1312 aaKnown RBP42.18■■■■■ 4.34
GGA1-204ENST00000381756 DCAF8L2P0C7V8 631 aa42.08■■■■■ 4.33
GGA1-204ENST00000381756 ABCC9O60706 1549 aa41.85■■■■■ 4.29
GGA1-204ENST00000381756 MYT1Q01538 1121 aa41.84■■■■■ 4.29
GGA1-204ENST00000381756 TRIM41Q8WV44 630 aa41.48■■■■■ 4.23
GGA1-204ENST00000381756 ACIN1Q9UKV3 1341 aaKnown RBP41.47■■■■■ 4.23
GGA1-204ENST00000381756 RSF1Q96T23 1441 aaPredicted RBP41.4■■■■■ 4.22
GGA1-204ENST00000381756 RB1CC1Q8TDY2 1594 aa41.27■■■■■ 4.2
GGA1-204ENST00000381756 NEUROD1Q13562 356 aa41.14■■■■■ 4.18
GGA1-204ENST00000381756 CENPBP07199 599 aaPredicted RBP41.12■■■■■ 4.17
GGA1-204ENST00000381756 FAM9AQ8IZU1 332 aaPredicted RBP40.94■■■■■ 4.14
GGA1-204ENST00000381756 GTF3C3Q9Y5Q9 886 aa40.89■■■■■ 4.14
GGA1-204ENST00000381756 CCER1Q8TC90 406 aaPredicted RBP40.85■■■■■ 4.13
GGA1-204ENST00000381756 DIEXFQ68CQ4 756 aaKnown RBP40.84■■■■■ 4.13
GGA1-204ENST00000381756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.74■■■■■ 4.11
GGA1-204ENST00000381756 SCRIBQ14160 1630 aa40.71■■■■■ 4.11
GGA1-204ENST00000381756 WRNQ14191 1432 aaPredicted RBP eCLIP40.52■■■■■ 4.08
GGA1-204ENST00000381756 EHMT2Q96KQ7 1210 aa40.35■■■■■ 4.05
GGA1-204ENST00000381756 ZNF316A6NFI3 1004 aaPredicted RBP40.27■■■■■ 4.04
GGA1-204ENST00000381756 EIF4G1Q04637 1599 aaKnown RBP40.23■■■■■ 4.03
GGA1-204ENST00000381756 MROH2BQ7Z745 1585 aa40.18■■■■■ 4.02
GGA1-204ENST00000381756 CECR2Q9BXF3 1484 aa40.11■■■■■ 4.01
GGA1-204ENST00000381756 BAZ1AQ9NRL2 1556 aaPredicted RBP40.07■■■■■ 4
GGA1-204ENST00000381756 WIZO95785 1651 aa40.01■■■■■ 4
GGA1-204ENST00000381756 CEP162Q5TB80 1403 aa39.99■■■■□ 3.99
GGA1-204ENST00000381756 TNIKQ9UKE5 1360 aa39.95■■■■□ 3.99
GGA1-204ENST00000381756 NACADO15069 1562 aa39.9■■■■□ 3.98
GGA1-204ENST00000381756 EEA1Q15075 1411 aa39.82■■■■□ 3.96
GGA1-204ENST00000381756 CLSPNQ9HAW4 1339 aa39.79■■■■□ 3.96
GGA1-204ENST00000381756 YTHDC1Q96MU7 727 aaKnown RBP39.7■■■■□ 3.95
GGA1-204ENST00000381756 MIER1Q8N108 512 aa39.7■■■■□ 3.95
GGA1-204ENST00000381756 CCDC88BA6NC98 1476 aa39.66■■■■□ 3.94
GGA1-204ENST00000381756 TOP2AP11388 1531 aaKnown RBP39.56■■■■□ 3.92
GGA1-204ENST00000381756 ABCC8Q09428 1581 aa39.53■■■■□ 3.92
GGA1-204ENST00000381756 TTBK1Q5TCY1 1321 aaPredicted RBP39.47■■■■□ 3.91
GGA1-204ENST00000381756 GOLGA3Q08378 1498 aa39.46■■■■□ 3.91
GGA1-204ENST00000381756 SOGA1O94964 1423 aa39.45■■■■□ 3.91
GGA1-204ENST00000381756 CSRNP3Q8WYN3 585 aa39.44■■■■□ 3.9
GGA1-204ENST00000381756 SMARCA2P51531 1590 aa39.33■■■■□ 3.89
GGA1-204ENST00000381756 UBTFP17480 764 aaKnown RBP39.27■■■■□ 3.88
GGA1-204ENST00000381756 SUPT16HQ9Y5B9 1047 aaKnown RBP39.14■■■■□ 3.86
GGA1-204ENST00000381756 KIF21BO75037 1637 aa39.13■■■■□ 3.85
GGA1-204ENST00000381756 SMARCA4P51532 1647 aa39.13■■■■□ 3.85
GGA1-204ENST00000381756 RUSC2Q8N2Y8 1516 aa39.12■■■■□ 3.85
GGA1-204ENST00000381756 CEP164Q9UPV0 1460 aa39.12■■■■□ 3.85
GGA1-204ENST00000381756 HNRNPUL2Q1KMD3 747 aaKnown RBP39.1■■■■□ 3.85
GGA1-204ENST00000381756 VPS8Q8N3P4 1428 aa39.06■■■■□ 3.84
GGA1-204ENST00000381756 CLIP1P30622 1438 aa38.99■■■■□ 3.83
GGA1-204ENST00000381756 BAZ1BQ9UIG0 1483 aaKnown RBP38.96■■■■□ 3.83
GGA1-204ENST00000381756 ANP32EQ9BTT0 268 aa38.95■■■■□ 3.83
GGA1-204ENST00000381756 TSHZ2Q9NRE2 1034 aa38.87■■■■□ 3.81
GGA1-204ENST00000381756 APLP2Q06481 763 aa38.82■■■■□ 3.8
GGA1-204ENST00000381756 DHX57Q6P158 1386 aaKnown RBP38.78■■■■□ 3.8
GGA1-204ENST00000381756 SYNJ1O43426 1573 aa38.57■■■■□ 3.76
GGA1-204ENST00000381756 CUX2O14529 1486 aa38.51■■■■□ 3.76
GGA1-204ENST00000381756 RAPGEF2Q9Y4G8 1499 aa38.48■■■■□ 3.75
GGA1-204ENST00000381756 BCL11AQ9H165 835 aa38.46■■■■□ 3.75
GGA1-204ENST00000381756 PEG3Q9GZU2 1588 aa38.45■■■■□ 3.75
GGA1-204ENST00000381756 RRBP1Q9P2E9 1410 aaKnown RBP38.4■■■■□ 3.74
GGA1-204ENST00000381756 ERICH3Q5RHP9 1530 aa38.31■■■■□ 3.72
GGA1-204ENST00000381756 UNC13AQ9UPW8 1703 aa38.25■■■■□ 3.71
GGA1-204ENST00000381756 ARAP1Q96P48 1450 aa38.2■■■■□ 3.71
GGA1-204ENST00000381756 TOP2BQ02880 1626 aa38.11■■■■□ 3.69
GGA1-204ENST00000381756 PRXQ9BXM0 1461 aa38.1■■■■□ 3.69
GGA1-204ENST00000381756 CCNB3Q8WWL7 1395 aa38.07■■■■□ 3.68
GGA1-204ENST00000381756 FKBP8Q14318 412 aa38.05■■■■□ 3.68
GGA1-204ENST00000381756 KANK4Q5T7N3 995 aaPredicted RBP38.02■■■■□ 3.68
GGA1-204ENST00000381756 RBM19Q9Y4C8 960 aaKnown RBP38■■■■□ 3.67
GGA1-204ENST00000381756 NEFLP07196 543 aa37.99■■■■□ 3.67
GGA1-204ENST00000381756 BIVM-ERCC5R4GMW8 1640 aa37.97■■■■□ 3.67
GGA1-204ENST00000381756 KCNH8Q96L42 1107 aa37.97■■■■□ 3.67
GGA1-204ENST00000381756 MAPKBP1O60336 1514 aa37.96■■■■□ 3.67
GGA1-204ENST00000381756 BCANQ96GW7 911 aa37.91■■■■□ 3.66
GGA1-204ENST00000381756 CCER2I3L3R5 266 aa37.9■■■■□ 3.66
GGA1-204ENST00000381756 TIMELESSQ9UNS1 1208 aa37.85■■■■□ 3.65
GGA1-204ENST00000381756 RANGAP1P46060 587 aaPredicted RBP37.84■■■■□ 3.65
GGA1-204ENST00000381756 RAB3GAP2Q9H2M9 1393 aa37.83■■■■□ 3.65
GGA1-204ENST00000381756 ATAD2BQ9ULI0 1458 aa37.79■■■■□ 3.64
GGA1-204ENST00000381756 MAP3K1Q13233 1512 aa37.78■■■■□ 3.64
GGA1-204ENST00000381756 PPP1R15AO75807 674 aaPredicted RBP37.78■■■■□ 3.64
GGA1-204ENST00000381756 BICRAQ9NZM4 1560 aa37.74■■■■□ 3.63
GGA1-204ENST00000381756 SETD5Q9C0A6 1442 aa37.71■■■■□ 3.63
GGA1-204ENST00000381756 WDR97A6NE52 1622 aa37.7■■■■□ 3.63
GGA1-204ENST00000381756 DDX10Q13206 875 aaKnown RBP37.7■■■■□ 3.63
GGA1-204ENST00000381756 FANCIQ9NVI1 1328 aa37.68■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms