RNA–Protein interactions for RNA: ENST00000620138.4

NAP1L4-222, Transcript of nucleosome assembly protein 1 like 4, humanhuman

TSL 2 BASIC

Gene NAP1L4, Length 2,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAP1L4-222ENST00000620138 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■■■■ 64.2
NAP1L4-222ENST00000620138 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.8■□□□□ 0.448e-7■■■■■ 56.5
NAP1L4-222ENST00000620138 RBM22Q9NW64 420 aaKnown RBP eCLIP16.59■□□□□ 0.257e-10■■■■■ 56.4
NAP1L4-222ENST00000620138 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.54■□□□□ 0.242e-6■■■■■ 50.3
NAP1L4-222ENST00000620138 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.84■□□□□ 0.133e-25■■■■■ 48.5
NAP1L4-222ENST00000620138 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.326e-12■■■■■ 42
NAP1L4-222ENST00000620138 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.651e-8■■■■■ 41.8
NAP1L4-222ENST00000620138 SF3B1O75533 1304 aaKnown RBP eCLIP17.08■□□□□ 0.331e-6■■■■■ 36.9
NAP1L4-222ENST00000620138 G3BP1Q13283 466 aaKnown RBP eCLIP19.61■□□□□ 0.731e-9■■■■■ 34
NAP1L4-222ENST00000620138 SRSF1Q07955 248 aaKnown RBP eCLIP12.72□□□□□ -0.373e-9■■■■■ 33.4
NAP1L4-222ENST00000620138 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.07□□□□□ -0.486e-8■■■■■ 32.9
NAP1L4-222ENST00000620138 SUB1P53999 127 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■■■ 30.7
NAP1L4-222ENST00000620138 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.56□□□□□ -0.085e-10■■■■■ 29
NAP1L4-222ENST00000620138 TRA2AQ13595 282 aaKnown RBP eCLIP13.92□□□□□ -0.183e-7■■■■■ 27.5
NAP1L4-222ENST00000620138 HNRNPKP61978 463 aaKnown RBP eCLIP14.41□□□□□ -0.14e-7■■■■■ 27.2
NAP1L4-222ENST00000620138 TARDBPQ13148 414 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■■■■□ 26
NAP1L4-222ENST00000620138 EFTUD2Q15029 972 aaKnown RBP eCLIP17.5■□□□□ 0.392e-9■■■■□ 25.4
NAP1L4-222ENST00000620138 FMR1Q06787 632 aaKnown RBP eCLIP19.05■□□□□ 0.641e-12■■■■□ 24.2
NAP1L4-222ENST00000620138 PCBP2Q15366 365 aaKnown RBP eCLIP16.26■□□□□ 0.199e-7■■■■□ 23.8
NAP1L4-222ENST00000620138 SF3B4Q15427 424 aaKnown RBP eCLIP16.17■□□□□ 0.183e-8■■■■□ 23.6
NAP1L4-222ENST00000620138 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.51■□□□□ 0.392e-9■■■■□ 23.4
NAP1L4-222ENST00000620138 HNRNPMP52272 730 aaKnown RBP eCLIP22.05■■□□□ 1.124e-7■■■■□ 22.8
NAP1L4-222ENST00000620138 UPF1Q92900 1129 aaKnown RBP eCLIP17.29■□□□□ 0.363e-18■■■■□ 22.3
NAP1L4-222ENST00000620138 GRSF1Q12849 480 aaKnown RBP eCLIP16.53■□□□□ 0.241e-19■■■■□ 22.1
NAP1L4-222ENST00000620138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.84■■□□□ 1.092e-7■■■■□ 21.9
NAP1L4-222ENST00000620138 U2AF1Q01081 240 aaKnown RBP eCLIP21.05■□□□□ 0.963e-8■■■■□ 21.8
NAP1L4-222ENST00000620138 FKBP4Q02790 459 aaKnown RBP eCLIP19.19■□□□□ 0.661e-7■■■■□ 20.5
NAP1L4-222ENST00000620138 NCBP2P52298 156 aaKnown RBP eCLIP15.53■□□□□ 0.087e-7■■■■□ 20.5
NAP1L4-222ENST00000620138 QKIQ96PU8 341 aaKnown RBP eCLIP17.03■□□□□ 0.321e-18■■■■□ 20.2
NAP1L4-222ENST00000620138 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.78■□□□□ 0.122e-9■■■■□ 19.9
NAP1L4-222ENST00000620138 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.42■□□□□ 0.226e-6■■■■□ 19.4
NAP1L4-222ENST00000620138 RBFOX2O43251 390 aaKnown RBP eCLIP13.86□□□□□ -0.192e-13■■■□□ 19.2
NAP1L4-222ENST00000620138 U2AF2P26368 475 aaKnown RBP eCLIP19.64■□□□□ 0.734e-9■■■□□ 19.1
NAP1L4-222ENST00000620138 SRSF7Q16629 238 aaKnown RBP eCLIP14.17□□□□□ -0.141e-5■■■□□ 19.1
NAP1L4-222ENST00000620138 ZRANB2O95218 330 aaKnown RBP eCLIP19.15■□□□□ 0.664e-7■■■□□ 18.9
NAP1L4-222ENST00000620138 XRCC6P12956 609 aaKnown RBP eCLIP21.02■□□□□ 0.962e-6■■■□□ 18.7
NAP1L4-222ENST00000620138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.13■□□□□ 0.652e-8■■■□□ 17.9
NAP1L4-222ENST00000620138 TIA1P31483 386 aaKnown RBP eCLIP15.85■□□□□ 0.134e-8■■■□□ 16.9
NAP1L4-222ENST00000620138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.56■□□□□ 0.565e-7■■■□□ 16.2
NAP1L4-222ENST00000620138 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.83■□□□□ 0.129e-7■■■□□ 16.1
NAP1L4-222ENST00000620138 SF3A3Q12874 501 aaKnown RBP eCLIP18■□□□□ 0.471e-7■■■□□ 16.1
NAP1L4-222ENST00000620138 NONOQ15233 471 aaKnown RBP eCLIP18.34■□□□□ 0.532e-7■■■□□ 16
NAP1L4-222ENST00000620138 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.13■□□□□ 0.172e-7■■■□□ 15.9
NAP1L4-222ENST00000620138 MATR3P43243 847 aaKnown RBP eCLIP18.46■□□□□ 0.552e-6■■■□□ 15.3
NAP1L4-222ENST00000620138 DDX3XO00571 662 aaKnown RBP eCLIP18.08■□□□□ 0.482e-24■■■□□ 15.2
NAP1L4-222ENST00000620138 DDX6P26196 483 aaKnown RBP eCLIP15.35■□□□□ 0.056e-7■■■□□ 15.2
NAP1L4-222ENST00000620138 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.03■□□□□ 0.166e-7■■■□□ 14.8
NAP1L4-222ENST00000620138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.06■■□□□ 1.127e-9■■■□□ 14.6
NAP1L4-222ENST00000620138 NKRFO15226 690 aaKnown RBP eCLIP18.56■□□□□ 0.563e-7■■□□□ 13.9
NAP1L4-222ENST00000620138 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.343e-7■■□□□ 13.5
NAP1L4-222ENST00000620138 RBM15Q96T37 977 aaKnown RBP eCLIP17.61■□□□□ 0.411e-6■■□□□ 13.1
NAP1L4-222ENST00000620138 HNRNPCP07910 306 aaKnown RBP eCLIP16.69■□□□□ 0.265e-9■■□□□ 12.8
NAP1L4-222ENST00000620138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.08■□□□□ 0.323e-7■■□□□ 12.7
NAP1L4-222ENST00000620138 PRPF4O43172 522 aaKnown RBP eCLIP17.57■□□□□ 0.41e-7■■□□□ 12.6
NAP1L4-222ENST00000620138 ZC3H11AO75152 810 aaKnown RBP eCLIP17.49■□□□□ 0.394e-9■■□□□ 12.5
NAP1L4-222ENST00000620138 ZNF622Q969S3 477 aaKnown RBP eCLIP17.75■□□□□ 0.431e-8■■□□□ 12.1
NAP1L4-222ENST00000620138 TIAL1Q01085 375 aaKnown RBP eCLIP16.54■□□□□ 0.242e-6■■□□□ 12.1
NAP1L4-222ENST00000620138 GTF2F1P35269 517 aaKnown RBP eCLIP19.86■□□□□ 0.772e-6■■□□□ 12.1
NAP1L4-222ENST00000620138 EWSR1Q01844 656 aaKnown RBP eCLIP14.39□□□□□ -0.114e-7■■□□□ 11.7
NAP1L4-222ENST00000620138 GPKOWQ92917 476 aaPredicted RBP eCLIP18.55■□□□□ 0.568e-12■■□□□ 11.6
NAP1L4-222ENST00000620138 SFPQP23246 707 aaKnown RBP eCLIP19.26■□□□□ 0.675e-7■■□□□ 11.6
NAP1L4-222ENST00000620138 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.23■□□□□ 0.671e-10■■□□□ 11.5
NAP1L4-222ENST00000620138 AARSP49588 968 aaKnown RBP eCLIP18.64■□□□□ 0.584e-7■■□□□ 11.4
NAP1L4-222ENST00000620138 NOLC1Q14978 699 aaKnown RBP eCLIP19.95■□□□□ 0.788e-9■□□□□ 11.3
NAP1L4-222ENST00000620138 PABPC4Q13310 644 aaKnown RBP eCLIP18.03■□□□□ 0.482e-21■□□□□ 11.3
NAP1L4-222ENST00000620138 DKC1O60832 514 aaKnown RBP eCLIP17.27■□□□□ 0.361e-323■□□□□ 11.2
NAP1L4-222ENST00000620138 AKAP1Q92667 903 aaKnown RBP eCLIP15.59■□□□□ 0.094e-7■□□□□ 11.2
NAP1L4-222ENST00000620138 NIPBLQ6KC79 2804 aaeCLIP11.51□□□□□ -0.571e-5■□□□□ 11.1
NAP1L4-222ENST00000620138 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.88■□□□□ 0.293e-9■□□□□ 11.1
NAP1L4-222ENST00000620138 PPIGQ13427 754 aaKnown RBP eCLIP16■□□□□ 0.151e-6■□□□□ 11
NAP1L4-222ENST00000620138 PUM1Q14671 1186 aaKnown RBP eCLIP15.84■□□□□ 0.132e-6■□□□□ 10.9
NAP1L4-222ENST00000620138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.41■■□□□ 1.343e-7■□□□□ 10.8
NAP1L4-222ENST00000620138 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.13■□□□□ 0.494e-7■□□□□ 10.6
NAP1L4-222ENST00000620138 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.89■□□□□ 0.457e-7■□□□□ 10.5
NAP1L4-222ENST00000620138 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.36■□□□□ 0.372e-14■□□□□ 10.5
NAP1L4-222ENST00000620138 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.96■□□□□ 0.472e-18■□□□□ 10.4
NAP1L4-222ENST00000620138 CDC40O60508 579 aaKnown RBP eCLIP14.98□□□□□ -0.014e-7■□□□□ 10.4
NAP1L4-222ENST00000620138 FXR2P51116 673 aaKnown RBP eCLIP18.26■□□□□ 0.513e-7■□□□□ 9.7
NAP1L4-222ENST00000620138 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.98■□□□□ 0.633e-7■□□□□ 9.5
NAP1L4-222ENST00000620138 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.54■□□□□ 0.081e-9■□□□□ 9.5
NAP1L4-222ENST00000620138 SMNDC1O75940 238 aaKnown RBP eCLIP17.64■□□□□ 0.419e-9■□□□□ 9.3
NAP1L4-222ENST00000620138 FUSP35637 526 aaKnown RBP eCLIP10.69□□□□□ -0.73e-7■□□□□ 8.8
NAP1L4-222ENST00000620138 PABPN1Q86U42 306 aaKnown RBP eCLIP26.09■■□□□ 1.771e-7■□□□□ 8.8
NAP1L4-222ENST00000620138 ILF3Q12906 894 aaKnown RBP eCLIP15.17■□□□□ 0.021e-7■□□□□ 8.7
NAP1L4-222ENST00000620138 LSM11P83369 360 aaKnown RBP eCLIP15.74■□□□□ 0.116e-9■□□□□ 8.2
NAP1L4-222ENST00000620138 CPSF6Q16630 551 aaKnown RBP eCLIP16.13■□□□□ 0.173e-6■□□□□ 8.1
Retrieved 86 of 86 RNA–protein pairs in 17.1 ms