RNA–Protein interactions for RNA: ENST00000539345.6

TBCD-202, Transcript of tubulin folding cofactor D, humanhuman

TSL 5 BASIC

Gene TBCD, Length 3,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCD-202ENST00000539345 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.03■□□□□ -03e-12■■■■■ 39.4
TBCD-202ENST00000539345 HNRNPLP14866 589 aaKnown RBP eCLIP15.6■□□□□ 0.099e-11■■■■■ 50.3
TBCD-202ENST00000539345 RBM5P52756 815 aaKnown RBP eCLIP16.33■□□□□ 0.22e-9■■□□□ 13.4
TBCD-202ENST00000539345 QKIQ96PU8 341 aaKnown RBP eCLIP15.76■□□□□ 0.114e-9■■■■■ 47.6
TBCD-202ENST00000539345 CDC40O60508 579 aaKnown RBP eCLIP13.97□□□□□ -0.174e-9■■■□□ 18.1
TBCD-202ENST00000539345 XRCC6P12956 609 aaKnown RBP eCLIP19.57■□□□□ 0.725e-9■■□□□ 13.8
TBCD-202ENST00000539345 NKRFO15226 690 aaKnown RBP eCLIP17.14■□□□□ 0.331e-8■□□□□ 11.2
TBCD-202ENST00000539345 FTOQ9C0B1 505 aaKnown RBP eCLIP18.09■□□□□ 0.492e-8■■■■□ 23
TBCD-202ENST00000539345 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.59■□□□□ 0.252e-8■■■■□ 24.7
TBCD-202ENST00000539345 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.95■□□□□ 0.143e-8■■■■■ 50.8
TBCD-202ENST00000539345 PTBP1P26599 531 aaKnown RBP eCLIP14.52□□□□□ -0.095e-8■■■■■ 28.5
TBCD-202ENST00000539345 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.7■□□□□ 0.585e-8■□□□□ 8.7
TBCD-202ENST00000539345 RBFOX2O43251 390 aaKnown RBP eCLIP12.93□□□□□ -0.346e-8■■■■■ 147.5
TBCD-202ENST00000539345 DDX3XO00571 662 aaKnown RBP eCLIP16.74■□□□□ 0.276e-8■■□□□ 12.8
TBCD-202ENST00000539345 AGGF1Q8N302 714 aaeCLIP16.4■□□□□ 0.227e-8■■■■■ 90.4
TBCD-202ENST00000539345 RBM22Q9NW64 420 aaKnown RBP eCLIP15.39■□□□□ 0.057e-8■■■■■ 29.6
TBCD-202ENST00000539345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.43■■□□□ 1.027e-8■■■■■ 322.9
TBCD-202ENST00000539345 DDX6P26196 483 aaKnown RBP eCLIP14.15□□□□□ -0.149e-8■■■■■ 261.6
TBCD-202ENST00000539345 RBM15Q96T37 977 aaKnown RBP eCLIP16.38■□□□□ 0.211e-7■■□□□ 12.8
TBCD-202ENST00000539345 LSM11P83369 360 aaKnown RBP eCLIP14.59□□□□□ -0.072e-7■■■■■ 34.3
TBCD-202ENST00000539345 EIF4G2P78344 907 aaKnown RBP eCLIP21.22■□□□□ 0.992e-7■■■■■ 30.9
TBCD-202ENST00000539345 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.33■□□□□ 0.22e-7■■■■■ 102.3
TBCD-202ENST00000539345 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.98■□□□□ 0.312e-7■■■□□ 17.5
TBCD-202ENST00000539345 GTF2F1P35269 517 aaKnown RBP eCLIP18.49■□□□□ 0.552e-7■■■■□ 26
TBCD-202ENST00000539345 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.84■□□□□ 0.292e-7■■□□□ 14
TBCD-202ENST00000539345 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.352e-7■■■■■ 27.1
TBCD-202ENST00000539345 PPIGQ13427 754 aaKnown RBP eCLIP14.88□□□□□ -0.032e-7■■■□□ 15.2
TBCD-202ENST00000539345 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.18■□□□□ 0.183e-7■■■■□ 23.7
TBCD-202ENST00000539345 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.38□□□□□ -0.113e-7■■■■■ 29.1
TBCD-202ENST00000539345 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.283e-7■■■■□ 22.6
TBCD-202ENST00000539345 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.05■□□□□ -03e-7■■■■■ 34.6
TBCD-202ENST00000539345 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.4■□□□□ 0.064e-7■■■■■ 54.9
TBCD-202ENST00000539345 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.07■□□□□ 04e-7■■□□□ 14.5
TBCD-202ENST00000539345 PCBP2Q15366 365 aaKnown RBP eCLIP15.06■□□□□ 04e-7■■■■■ 54.1
TBCD-202ENST00000539345 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.64□□□□□ -0.074e-7■■□□□ 12.4
TBCD-202ENST00000539345 NPM1P06748 294 aaKnown RBP eCLIP18.8■□□□□ 0.65e-7■■■■■ 52.3
TBCD-202ENST00000539345 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 15e-7■■■■□ 20.3
TBCD-202ENST00000539345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19■□□□□ 0.635e-7■□□□□ 8.1
TBCD-202ENST00000539345 U2AF2P26368 475 aaKnown RBP eCLIP18.34■□□□□ 0.535e-7■■■□□ 15.6
TBCD-202ENST00000539345 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.25e-7■■■■□ 19.8
TBCD-202ENST00000539345 SF3B4Q15427 424 aaKnown RBP eCLIP15.14■□□□□ 0.016e-7■■■■□ 20.7
TBCD-202ENST00000539345 FUSP35637 526 aaKnown RBP eCLIP10.09□□□□□ -0.797e-7■■■■□ 23
TBCD-202ENST00000539345 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.53□□□□□ -0.087e-7■■■■□ 24.6
TBCD-202ENST00000539345 FUBP3Q96I24 572 aaKnown RBP eCLIP14.92□□□□□ -0.027e-7■■■■■ 41.3
TBCD-202ENST00000539345 ZRANB2O95218 330 aaKnown RBP eCLIP17.81■□□□□ 0.447e-7■■■■□ 22.5
TBCD-202ENST00000539345 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.57■□□□□ 0.47e-7■■■■□ 23.5
TBCD-202ENST00000539345 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.02□□□□□ -0.488e-7■■■□□ 16.5
TBCD-202ENST00000539345 AARSP49588 968 aaKnown RBP eCLIP17.33■□□□□ 0.379e-7■■■■■ 61.1
TBCD-202ENST00000539345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.55■□□□□ 0.49e-7■■□□□ 12.5
TBCD-202ENST00000539345 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.91■□□□□ 0.469e-7■■■□□ 17.4
TBCD-202ENST00000539345 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.53■□□□□ 0.249e-7■■■■■ 253.3
TBCD-202ENST00000539345 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.88■□□□□ 0.299e-7■■■■■ 57.1
TBCD-202ENST00000539345 NONOQ15233 471 aaKnown RBP eCLIP16.98■□□□□ 0.311e-6■■■■□ 23.6
TBCD-202ENST00000539345 TROVE2P10155 538 aaKnown RBP eCLIP16.28■□□□□ 0.21e-6■■□□□ 12.6
TBCD-202ENST00000539345 HNRNPMP52272 730 aaKnown RBP eCLIP20.22■□□□□ 0.831e-6■■■■□ 24.2
TBCD-202ENST00000539345 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■■■□ 22.8
TBCD-202ENST00000539345 SF3A3Q12874 501 aaKnown RBP eCLIP16.82■□□□□ 0.281e-6■■■■■ 28
TBCD-202ENST00000539345 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.21■□□□□ 0.191e-6■■■□□ 17.3
TBCD-202ENST00000539345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.811e-6■■□□□ 14.2
TBCD-202ENST00000539345 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.72■□□□□ 0.271e-6■■■■□ 22.7
TBCD-202ENST00000539345 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16■□□□□ 0.151e-6■□□□□ 10.6
TBCD-202ENST00000539345 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.63■□□□□ 0.092e-6■■□□□ 13.8
TBCD-202ENST00000539345 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.13■□□□□ 0.492e-6■□□□□ 9.3
TBCD-202ENST00000539345 PABPC4Q13310 644 aaKnown RBP eCLIP16.7■□□□□ 0.262e-6■■■■□ 25.5
TBCD-202ENST00000539345 EFTUD2Q15029 972 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■■■■□ 20.4
TBCD-202ENST00000539345 EWSR1Q01844 656 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■■■□ 21.1
TBCD-202ENST00000539345 TARDBPQ13148 414 aaKnown RBP eCLIP14.66□□□□□ -0.062e-6■■■■■ 27.8
TBCD-202ENST00000539345 ZC3H11AO75152 810 aaKnown RBP eCLIP16.18■□□□□ 0.182e-6■■■■□ 20.6
TBCD-202ENST00000539345 FXR2P51116 673 aaKnown RBP eCLIP16.87■□□□□ 0.292e-6■■□□□ 11.8
TBCD-202ENST00000539345 TAF15Q92804 592 aaKnown RBP eCLIP13.1□□□□□ -0.312e-6■■■■□ 20
TBCD-202ENST00000539345 NIPBLQ6KC79 2804 aaeCLIP10.7□□□□□ -0.72e-6■■■■□ 24.2
TBCD-202ENST00000539345 TIA1P31483 386 aaKnown RBP eCLIP14.7□□□□□ -0.063e-6■■□□□ 14.5
TBCD-202ENST00000539345 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.54□□□□□ -0.243e-6■■□□□ 13.5
TBCD-202ENST00000539345 SMNDC1O75940 238 aaKnown RBP eCLIP16.47■□□□□ 0.233e-6■■□□□ 13
TBCD-202ENST00000539345 KHSRPQ92945 711 aaKnown RBP eCLIP15.74■□□□□ 0.113e-6■■■□□ 14.8
TBCD-202ENST00000539345 SFPQP23246 707 aaKnown RBP eCLIP17.94■□□□□ 0.463e-6■■■□□ 17.2
TBCD-202ENST00000539345 SUB1P53999 127 aaKnown RBP eCLIP12.4□□□□□ -0.423e-6■■■■□ 19.8
TBCD-202ENST00000539345 HNRNPCP07910 306 aaKnown RBP eCLIP15.71■□□□□ 0.113e-6■■■□□ 18.6
TBCD-202ENST00000539345 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.08■□□□□ 0.323e-6■■■■□ 20.5
TBCD-202ENST00000539345 PRPF4O43172 522 aaKnown RBP eCLIP16.32■□□□□ 0.23e-6■■□□□ 14.3
TBCD-202ENST00000539345 SF3B1O75533 1304 aaKnown RBP eCLIP15.89■□□□□ 0.134e-6■■■■■ 106.1
TBCD-202ENST00000539345 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.68□□□□□ -0.064e-6■■■■■ 36.3
TBCD-202ENST00000539345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.744e-6■■■■□ 21.5
TBCD-202ENST00000539345 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.8□□□□□ -0.044e-6■■■■■ 27
TBCD-202ENST00000539345 EIF3HO15372 352 aaKnown RBP eCLIP17.17■□□□□ 0.344e-6■■□□□ 12.3
TBCD-202ENST00000539345 YBX3P16989 372 aaKnown RBP eCLIP15.52■□□□□ 0.084e-6■■□□□ 13.3
TBCD-202ENST00000539345 FMR1Q06787 632 aaKnown RBP eCLIP17.64■□□□□ 0.414e-6■□□□□ 10
TBCD-202ENST00000539345 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.82□□□□□ -0.25e-6■■■■■ 39.2
TBCD-202ENST00000539345 G3BP1Q13283 466 aaKnown RBP eCLIP18.15■□□□□ 0.55e-6■■■■□ 22.5
TBCD-202ENST00000539345 NOLC1Q14978 699 aaKnown RBP eCLIP18.6■□□□□ 0.575e-6■■□□□ 12.1
TBCD-202ENST00000539345 ZNF622Q969S3 477 aaKnown RBP eCLIP16.52■□□□□ 0.235e-6■□□□□ 9.9
TBCD-202ENST00000539345 SRSF9Q13242 221 aaKnown RBP eCLIP11.76□□□□□ -0.537e-6■■■■□ 20
TBCD-202ENST00000539345 PCBP1Q15365 356 aaKnown RBP eCLIP15.23■□□□□ 0.038e-6■□□□□ 10.9
TBCD-202ENST00000539345 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.12■□□□□ 0.179e-6■■■□□ 15.9
TBCD-202ENST00000539345 WRNQ14191 1432 aaPredicted RBP eCLIP23.26■■□□□ 1.319e-6■■■■■ 50.1
TBCD-202ENST00000539345 DKC1O60832 514 aaKnown RBP eCLIP15.98■□□□□ 0.151e-5■■■■□ 25.7
Retrieved 96 of 96 RNA–protein pairs in 18.5 ms