Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.92e-84■■■■■ 371.7
DDX59Q5T1V6 NPIPA1-208ENST00000545831 553 ntTSL 39.38□□□□□ -0.912e-84■■■■■ 371.7
DDX59Q5T1V6 NPIPA1-202ENST00000424549 657 ntTSL 35.52□□□□□ -1.534e-88■■■■■ 347.8
DDX59Q5T1V6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.566e-18■■■■■ 214.9
DDX59Q5T1V6 EP400NL-213ENST00000613241 455 ntTSL 311.36□□□□□ -0.591e-75■■■■■ 192.7
DDX59Q5T1V6 NPIPA1-203ENST00000472413 5345 ntTSL 215.49■□□□□ 0.077e-19■■■■■ 168.9
DDX59Q5T1V6 NPIPA1-206ENST00000541836 2747 ntTSL 513.51□□□□□ -0.257e-19■■■■■ 168.9
DDX59Q5T1V6 MAGI3-206ENST00000486456 897 ntTSL 518.08■□□□□ 0.481e-22■■■■■ 126.7
DDX59Q5T1V6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.23■□□□□ 0.351e-22■■■■■ 126.7
DDX59Q5T1V6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.221e-22■■■■■ 126.7
DDX59Q5T1V6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.47■□□□□ 0.071e-22■■■■■ 126.7
DDX59Q5T1V6 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21e-22■■■■■ 126.7
DDX59Q5T1V6 EP400NL-210ENST00000537558 861 ntTSL 416.62■□□□□ 0.256e-19■■■■■ 124.7
DDX59Q5T1V6 EP400NL-212ENST00000539351 564 ntTSL 414.72□□□□□ -0.056e-19■■■■■ 124.7
DDX59Q5T1V6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.592e-11■■■■■ 123.2
DDX59Q5T1V6 ATP7B-216ENST00000635406 506 ntTSL 418.99■□□□□ 0.633e-25■■■■■ 121.6
DDX59Q5T1V6 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.62□□□□□ -0.393e-25■■■■■ 121.6
DDX59Q5T1V6 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.483e-25■■■■■ 121.6
DDX59Q5T1V6 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.593e-25■■■■■ 121.6
DDX59Q5T1V6 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC9.9□□□□□ -0.833e-25■■■■■ 121.6
DDX59Q5T1V6 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.873e-25■■■■■ 121.6
DDX59Q5T1V6 ATP7B-211ENST00000634308 4321 ntTSL 1 (best)9.48□□□□□ -0.893e-25■■■■■ 121.6
DDX59Q5T1V6 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.923e-25■■■■■ 121.6
DDX59Q5T1V6 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.963e-25■■■■■ 121.6
DDX59Q5T1V6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.93■□□□□ 0.782e-27■■■■■ 120.6
DDX59Q5T1V6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.292e-27■■■■■ 120.6
DDX59Q5T1V6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.92■□□□□ 0.142e-27■■■■■ 120.6
DDX59Q5T1V6 JPT1-201ENST00000304834 1633 ntTSL 1 (best)15.37■□□□□ 0.052e-27■■■■■ 120.6
DDX59Q5T1V6 JPT1-210ENST00000580380 411 ntTSL 513.79□□□□□ -0.22e-27■■■■■ 120.6
DDX59Q5T1V6 JPT1-207ENST00000481094 382 ntTSL 513.25□□□□□ -0.292e-27■■■■■ 120.6
DDX59Q5T1V6 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC12.58□□□□□ -0.42e-27■■■■■ 120.6
DDX59Q5T1V6 JPT1-208ENST00000481647 576 ntTSL 5 BASIC11.46□□□□□ -0.572e-27■■■■■ 120.6
DDX59Q5T1V6 JPT1-205ENST00000470924 663 ntTSL 5 BASIC10.83□□□□□ -0.682e-27■■■■■ 120.6
DDX59Q5T1V6 JPT1-211ENST00000581874 517 ntTSL 5 BASIC7.6□□□□□ -1.192e-27■■■■■ 120.6
DDX59Q5T1V6 BCAM-204ENST00000588714 723 ntTSL 213.07□□□□□ -0.321e-323■■■■■ 103.3
DDX59Q5T1V6 EP400NL-203ENST00000392352 2172 ntTSL 223.53■■□□□ 1.363e-7■■■■■ 99.6
DDX59Q5T1V6 EP400NL-205ENST00000443539 1756 ntTSL 221.51■■□□□ 1.033e-7■■■■■ 99.6
DDX59Q5T1V6 EP400NL-202ENST00000389560 1726 ntTSL 1 (best)20.78■□□□□ 0.923e-7■■■■■ 99.6
DDX59Q5T1V6 EP400NL-207ENST00000454179 781 ntTSL 216.98■□□□□ 0.313e-7■■■■■ 99.6
DDX59Q5T1V6 EP400NL-209ENST00000488030 1366 ntTSL 216.11■□□□□ 0.173e-7■■■■■ 99.6
DDX59Q5T1V6 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.09□□□□□ -0.153e-7■■■■■ 99.6
DDX59Q5T1V6 PCNX1-206ENST00000554292 402 ntTSL 425.78■■□□□ 1.721e-6■■■■■ 95.4
DDX59Q5T1V6 PCNX1-209ENST00000554879 4431 ntTSL 1 (best)16.02■□□□□ 0.161e-6■■■■■ 95.4
DDX59Q5T1V6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.54□□□□□ -0.081e-6■■■■■ 95.4
DDX59Q5T1V6 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.11e-6■■■■■ 95.4
DDX59Q5T1V6 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC12.05□□□□□ -0.488e-19■■■■■ 93.4
DDX59Q5T1V6 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.558e-19■■■■■ 93.4
DDX59Q5T1V6 ARHGAP12-202ENST00000344936 4128 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.78e-19■■■■■ 93.4
DDX59Q5T1V6 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.34□□□□□ -1.238e-19■■■■■ 93.4
DDX59Q5T1V6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.25□□□□□ -1.898e-19■■■■■ 93.4
DDX59Q5T1V6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.54■□□□□ 0.241e-67■■■■■ 91
DDX59Q5T1V6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.77□□□□□ -0.212e-7■■■■■ 90.8
DDX59Q5T1V6 PKD1P6-NPIPP1-201ENST00000340301 547 ntTSL 511.34□□□□□ -0.592e-7■■■■■ 90.8
DDX59Q5T1V6 NPIPP1-203ENST00000547107 1071 ntBASIC7.1□□□□□ -1.272e-7■■■■■ 90.8
DDX59Q5T1V6 MTM1-204ENST00000424519 361 ntTSL 313.44□□□□□ -0.266e-13■■■■■ 90.7
DDX59Q5T1V6 MTM1-205ENST00000490530 806 ntTSL 37.72□□□□□ -1.176e-13■■■■■ 90.7
DDX59Q5T1V6 MTM1-201ENST00000306167 2955 ntTSL 54.78□□□□□ -1.646e-13■■■■■ 90.7
DDX59Q5T1V6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.716e-13■■■■■ 90.7
DDX59Q5T1V6 LARP1-211ENST00000521577 817 ntTSL 522.47■■□□□ 1.199e-8■■■■■ 90.6
DDX59Q5T1V6 LARP1-204ENST00000518297 2630 ntTSL 520.54■□□□□ 0.889e-8■■■■■ 90.6
DDX59Q5T1V6 LARP1-208ENST00000518892 399 ntTSL 319.24■□□□□ 0.679e-8■■■■■ 90.6
DDX59Q5T1V6 LARP1-215ENST00000524248 2128 ntTSL 517.09■□□□□ 0.339e-8■■■■■ 90.6
DDX59Q5T1V6 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.539e-8■■■■■ 90.6
DDX59Q5T1V6 LARP1-210ENST00000519931 569 ntTSL 47.05□□□□□ -1.289e-8■■■■■ 90.6
DDX59Q5T1V6 LARP1-202ENST00000517616 501 ntTSL 53.46□□□□□ -1.869e-8■■■■■ 90.6
DDX59Q5T1V6 ATP11A-208ENST00000459908 4516 ntTSL 29.95□□□□□ -0.828e-7■■■■■ 89.9
DDX59Q5T1V6 ATP11A-204ENST00000418678 3163 ntAPPRIS ALT2 TSL 1 (best)7.61□□□□□ -1.198e-7■■■■■ 89.9
DDX59Q5T1V6 AC138932.1-201ENST00000534164 6830 ntBASIC18.76■□□□□ 0.596e-7■■■■■ 88.3
DDX59Q5T1V6 TCF25-210ENST00000563484 468 ntTSL 29.53□□□□□ -0.885e-14■■■■■ 87.7
DDX59Q5T1V6 EXOC4-204ENST00000460346 762 ntTSL 49.09□□□□□ -0.951e-15■■■■■ 87.4
DDX59Q5T1V6 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.161e-15■■■■■ 87.4
DDX59Q5T1V6 EXOC4-209ENST00000469115 755 ntTSL 36.96□□□□□ -1.31e-15■■■■■ 87.4
DDX59Q5T1V6 EXOC4-217ENST00000483800 559 ntTSL 46.96□□□□□ -1.31e-15■■■■■ 87.4
DDX59Q5T1V6 EXOC4-221ENST00000489931 578 ntTSL 46.96□□□□□ -1.31e-15■■■■■ 87.4
DDX59Q5T1V6 EXOC4-216ENST00000482089 628 ntTSL 46.96□□□□□ -1.31e-15■■■■■ 87.4
DDX59Q5T1V6 EXOC4-212ENST00000479839 543 ntTSL 45.15□□□□□ -1.591e-15■■■■■ 87.4
DDX59Q5T1V6 EIPR1-212ENST00000478754 2932 ntTSL 516.06■□□□□ 0.164e-16■■■■■ 87
DDX59Q5T1V6 EIPR1-209ENST00000462515 577 ntTSL 314.49□□□□□ -0.094e-16■■■■■ 87
DDX59Q5T1V6 EIPR1-213ENST00000482570 582 ntTSL 211.41□□□□□ -0.584e-16■■■■■ 87
DDX59Q5T1V6 ANKRD11-211ENST00000566973 442 ntTSL 217.89■□□□□ 0.455e-7■■■■■ 84.4
DDX59Q5T1V6 ANKRD11-215ENST00000568512 294 ntTSL 28.53□□□□□ -1.045e-7■■■■■ 84.4
DDX59Q5T1V6 AC004678.1-201ENST00000615016 929 ntBASIC8.32□□□□□ -1.085e-15■■■■■ 82.7
DDX59Q5T1V6 LRMDA-209ENST00000593699 1124 ntTSL 1 (best)9.82□□□□□ -0.841e-42■■■■■ 82.5
DDX59Q5T1V6 LRMDA-210ENST00000593817 221 ntTSL 34.46□□□□□ -1.71e-42■■■■■ 82.5
DDX59Q5T1V6 ARIH1-206ENST00000564062 612 ntTSL 328.58■■■□□ 2.175e-15■■■■■ 81.2
DDX59Q5T1V6 ARIH1-210ENST00000570085 807 ntTSL 326.88■■□□□ 1.895e-15■■■■■ 81.2
DDX59Q5T1V6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.445e-15■■■■■ 81.2
DDX59Q5T1V6 ARIH1-209ENST00000567762 319 ntTSL 33.81□□□□□ -1.85e-15■■■■■ 81.2
DDX59Q5T1V6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.86■□□□□ 0.611e-8■■■■■ 80.9
DDX59Q5T1V6 TCF25-207ENST00000562256 1879 ntTSL 1 (best)17.63■□□□□ 0.411e-8■■■■■ 80.9
DDX59Q5T1V6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.02■□□□□ 0.161e-8■■■■■ 80.9
DDX59Q5T1V6 TCF25-224ENST00000570116 1947 ntTSL 515.91■□□□□ 0.141e-8■■■■■ 80.9
DDX59Q5T1V6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.131e-8■■■■■ 80.9
DDX59Q5T1V6 TCF25-226ENST00000640279 2688 ntTSL 515.32■□□□□ 0.041e-8■■■■■ 80.9
DDX59Q5T1V6 LINC00894-204ENST00000444489 2951 ntTSL 510.85□□□□□ -0.673e-9■■■■■ 80
DDX59Q5T1V6 LINC00894-205ENST00000449111 3414 ntTSL 59.02□□□□□ -0.963e-9■■■■■ 80
DDX59Q5T1V6 NPIPB14P-201ENST00000525562 1212 ntTSL 1 (best)10.67□□□□□ -0.75e-15■■■■■ 78.8
DDX59Q5T1V6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.232e-14■■■■■ 78
DDX59Q5T1V6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.85■□□□□ 0.132e-14■■■■■ 78
DDX59Q5T1V6 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.192e-14■■■■■ 78
Retrieved 100 of 7,289 protein–RNA pairs in 40.1 ms