RNA–Protein interactions for RNA: ENST00000355528.8

TBCD-201, Transcript of tubulin folding cofactor D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBCD, Length 7,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBCD-201ENST00000355528 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.7□□□□□ -0.387e-8■■■■■ 322.9
TBCD-201ENST00000355528 DDX6P26196 483 aaKnown RBP eCLIP11.36□□□□□ -0.599e-8■■■■■ 261.6
TBCD-201ENST00000355528 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.58□□□□□ -0.089e-7■■■■■ 253.3
TBCD-201ENST00000355528 RBFOX2O43251 390 aaKnown RBP eCLIP10.18□□□□□ -0.786e-8■■■■■ 147.5
TBCD-201ENST00000355528 SF3B1O75533 1304 aaKnown RBP eCLIP11.44□□□□□ -0.584e-6■■■■■ 106.1
TBCD-201ENST00000355528 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.86□□□□□ -0.672e-7■■■■■ 102.3
TBCD-201ENST00000355528 AGGF1Q8N302 714 aaeCLIP11.87□□□□□ -0.517e-8■■■■■ 90.4
TBCD-201ENST00000355528 AARSP49588 968 aaKnown RBP eCLIP12.05□□□□□ -0.489e-7■■■■■ 61.1
TBCD-201ENST00000355528 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.45□□□□□ -0.429e-7■■■■■ 57.1
TBCD-201ENST00000355528 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.07□□□□□ -0.484e-7■■■■■ 54.9
TBCD-201ENST00000355528 PCBP2Q15366 365 aaKnown RBP eCLIP11.34□□□□□ -0.594e-7■■■■■ 54.1
TBCD-201ENST00000355528 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -05e-7■■■■■ 52.3
TBCD-201ENST00000355528 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.8□□□□□ -0.363e-8■■■■■ 50.8
TBCD-201ENST00000355528 HNRNPLP14866 589 aaKnown RBP eCLIP11.19□□□□□ -0.629e-11■■■■■ 50.3
TBCD-201ENST00000355528 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.119e-6■■■■■ 50.1
TBCD-201ENST00000355528 QKIQ96PU8 341 aaKnown RBP eCLIP12.01□□□□□ -0.494e-9■■■■■ 47.6
TBCD-201ENST00000355528 FUBP3Q96I24 572 aaKnown RBP eCLIP11.11□□□□□ -0.637e-7■■■■■ 41.3
TBCD-201ENST00000355528 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.73□□□□□ -0.533e-12■■■■■ 39.4
TBCD-201ENST00000355528 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.59□□□□□ -0.715e-6■■■■■ 39.2
TBCD-201ENST00000355528 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.11□□□□□ -0.634e-6■■■■■ 36.3
TBCD-201ENST00000355528 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.67□□□□□ -0.543e-7■■■■■ 34.6
TBCD-201ENST00000355528 LSM11P83369 360 aaKnown RBP eCLIP10.49□□□□□ -0.732e-7■■■■■ 34.3
TBCD-201ENST00000355528 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.072e-7■■■■■ 30.9
TBCD-201ENST00000355528 RBM22Q9NW64 420 aaKnown RBP eCLIP11.34□□□□□ -0.597e-8■■■■■ 29.6
TBCD-201ENST00000355528 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.58□□□□□ -0.723e-7■■■■■ 29.1
TBCD-201ENST00000355528 PTBP1P26599 531 aaKnown RBP eCLIP10.52□□□□□ -0.735e-8■■■■■ 28.5
TBCD-201ENST00000355528 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.31e-6■■■■■ 28
TBCD-201ENST00000355528 TARDBPQ13148 414 aaKnown RBP eCLIP10.96□□□□□ -0.662e-6■■■■■ 27.8
TBCD-201ENST00000355528 MATR3P43243 847 aaKnown RBP eCLIP13.86□□□□□ -0.192e-7■■■■■ 27.1
TBCD-201ENST00000355528 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.35□□□□□ -0.594e-6■■■■■ 27
TBCD-201ENST00000355528 GTF2F1P35269 517 aaKnown RBP eCLIP13.1□□□□□ -0.312e-7■■■■□ 26
TBCD-201ENST00000355528 DKC1O60832 514 aaKnown RBP eCLIP12.34□□□□□ -0.431e-5■■■■□ 25.7
TBCD-201ENST00000355528 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■■■□ 25.5
TBCD-201ENST00000355528 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.87□□□□□ -0.192e-8■■■■□ 24.7
TBCD-201ENST00000355528 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.45□□□□□ -0.587e-7■■■■□ 24.6
TBCD-201ENST00000355528 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.181e-6■■■■□ 24.2
TBCD-201ENST00000355528 NIPBLQ6KC79 2804 aaeCLIP5.44□□□□□ -1.542e-6■■■■□ 24.2
TBCD-201ENST00000355528 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.443e-7■■■■□ 23.7
TBCD-201ENST00000355528 NONOQ15233 471 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■■■□ 23.6
TBCD-201ENST00000355528 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.22□□□□□ -0.297e-7■■■■□ 23.5
TBCD-201ENST00000355528 FTOQ9C0B1 505 aaKnown RBP eCLIP12.48□□□□□ -0.412e-8■■■■□ 23
TBCD-201ENST00000355528 FUSP35637 526 aaKnown RBP eCLIP9.3□□□□□ -0.927e-7■■■■□ 23
TBCD-201ENST00000355528 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.9□□□□□ -0.51e-6■■■■□ 22.8
TBCD-201ENST00000355528 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■■■□ 22.7
TBCD-201ENST00000355528 HNRNPKP61978 463 aaKnown RBP eCLIP11.42□□□□□ -0.583e-7■■■■□ 22.6
TBCD-201ENST00000355528 ZRANB2O95218 330 aaKnown RBP eCLIP13.43□□□□□ -0.267e-7■■■■□ 22.5
TBCD-201ENST00000355528 G3BP1Q13283 466 aaKnown RBP eCLIP13.51□□□□□ -0.255e-6■■■■□ 22.5
TBCD-201ENST00000355528 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.494e-6■■■■□ 21.5
TBCD-201ENST00000355528 EWSR1Q01844 656 aaKnown RBP eCLIP9.64□□□□□ -0.872e-6■■■■□ 21.1
TBCD-201ENST00000355528 SF3B4Q15427 424 aaKnown RBP eCLIP10.47□□□□□ -0.736e-7■■■■□ 20.7
TBCD-201ENST00000355528 ZC3H11AO75152 810 aaKnown RBP eCLIP11.65□□□□□ -0.542e-6■■■■□ 20.6
TBCD-201ENST00000355528 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.37□□□□□ -0.593e-6■■■■□ 20.5
TBCD-201ENST00000355528 EFTUD2Q15029 972 aaKnown RBP eCLIP11.96□□□□□ -0.492e-6■■■■□ 20.4
TBCD-201ENST00000355528 AQRO60306 1485 aaKnown RBP eCLIP13.3□□□□□ -0.285e-7■■■■□ 20.3
TBCD-201ENST00000355528 SRSF9Q13242 221 aaKnown RBP eCLIP10.67□□□□□ -0.77e-6■■■■□ 20
TBCD-201ENST00000355528 TAF15Q92804 592 aaKnown RBP eCLIP9.54□□□□□ -0.882e-6■■■■□ 20
TBCD-201ENST00000355528 SUB1P53999 127 aaKnown RBP eCLIP10.42□□□□□ -0.743e-6■■■■□ 19.8
TBCD-201ENST00000355528 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.15e-7■■■■□ 19.8
TBCD-201ENST00000355528 HNRNPCP07910 306 aaKnown RBP eCLIP12.81□□□□□ -0.363e-6■■■□□ 18.6
TBCD-201ENST00000355528 CDC40O60508 579 aaKnown RBP eCLIP12.52□□□□□ -0.414e-9■■■□□ 18.1
TBCD-201ENST00000355528 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.18□□□□□ -0.32e-7■■■□□ 17.5
TBCD-201ENST00000355528 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.62□□□□□ -0.399e-7■■■□□ 17.4
TBCD-201ENST00000355528 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.74□□□□□ -0.371e-6■■■□□ 17.3
TBCD-201ENST00000355528 SFPQP23246 707 aaKnown RBP eCLIP12.78□□□□□ -0.363e-6■■■□□ 17.2
TBCD-201ENST00000355528 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.97□□□□□ -0.818e-7■■■□□ 16.5
TBCD-201ENST00000355528 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.57□□□□□ -0.729e-6■■■□□ 15.9
TBCD-201ENST00000355528 U2AF2P26368 475 aaKnown RBP eCLIP12.46□□□□□ -0.415e-7■■■□□ 15.6
TBCD-201ENST00000355528 PPIGQ13427 754 aaKnown RBP eCLIP11.1□□□□□ -0.632e-7■■■□□ 15.2
TBCD-201ENST00000355528 KHSRPQ92945 711 aaKnown RBP eCLIP10.24□□□□□ -0.773e-6■■■□□ 14.8
TBCD-201ENST00000355528 TIA1P31483 386 aaKnown RBP eCLIP10.59□□□□□ -0.713e-6■■□□□ 14.5
TBCD-201ENST00000355528 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.98□□□□□ -0.494e-7■■□□□ 14.5
TBCD-201ENST00000355528 PRPF4O43172 522 aaKnown RBP eCLIP12.37□□□□□ -0.433e-6■■□□□ 14.3
TBCD-201ENST00000355528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.011e-6■■□□□ 14.2
TBCD-201ENST00000355528 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.33□□□□□ -0.442e-7■■□□□ 14
TBCD-201ENST00000355528 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.52□□□□□ -0.572e-6■■□□□ 13.8
TBCD-201ENST00000355528 XRCC6P12956 609 aaKnown RBP eCLIP13.1□□□□□ -0.315e-9■■□□□ 13.8
TBCD-201ENST00000355528 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.64□□□□□ -0.713e-6■■□□□ 13.5
TBCD-201ENST00000355528 RBM5P52756 815 aaKnown RBP eCLIP13.78□□□□□ -0.22e-9■■□□□ 13.4
TBCD-201ENST00000355528 YBX3P16989 372 aaKnown RBP eCLIP11.29□□□□□ -0.64e-6■■□□□ 13.3
TBCD-201ENST00000355528 SMNDC1O75940 238 aaKnown RBP eCLIP11.98□□□□□ -0.493e-6■■□□□ 13
TBCD-201ENST00000355528 RBM15Q96T37 977 aaKnown RBP eCLIP11.55□□□□□ -0.561e-7■■□□□ 12.8
TBCD-201ENST00000355528 DDX3XO00571 662 aaKnown RBP eCLIP11.43□□□□□ -0.586e-8■■□□□ 12.8
TBCD-201ENST00000355528 TROVE2P10155 538 aaKnown RBP eCLIP12.29□□□□□ -0.441e-6■■□□□ 12.6
TBCD-201ENST00000355528 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.59e-7■■□□□ 12.5
TBCD-201ENST00000355528 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.93□□□□□ -0.664e-7■■□□□ 12.4
TBCD-201ENST00000355528 EIF3HO15372 352 aaKnown RBP eCLIP11.44□□□□□ -0.584e-6■■□□□ 12.3
TBCD-201ENST00000355528 NOLC1Q14978 699 aaKnown RBP eCLIP12.44□□□□□ -0.425e-6■■□□□ 12.1
TBCD-201ENST00000355528 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.572e-6■■□□□ 11.8
TBCD-201ENST00000355528 NKRFO15226 690 aaKnown RBP eCLIP11.39□□□□□ -0.591e-8■□□□□ 11.2
TBCD-201ENST00000355528 PCBP1Q15365 356 aaKnown RBP eCLIP11.13□□□□□ -0.638e-6■□□□□ 10.9
TBCD-201ENST00000355528 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.44□□□□□ -0.421e-6■□□□□ 10.6
TBCD-201ENST00000355528 FMR1Q06787 632 aaKnown RBP eCLIP11.56□□□□□ -0.564e-6■□□□□ 10
TBCD-201ENST00000355528 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.35e-6■□□□□ 9.9
TBCD-201ENST00000355528 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.01□□□□□ -0.332e-6■□□□□ 9.3
TBCD-201ENST00000355528 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.3□□□□□ -0.445e-8■□□□□ 8.7
TBCD-201ENST00000355528 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■□□□□ 8.1
Retrieved 96 of 96 RNA–protein pairs in 22.9 ms