Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
PCDHGA7Q9Y5G6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGA7Q9Y5G6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHGA7Q9Y5G6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.37■■□□□ 1.81
PCDHGA7Q9Y5G6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.37■■□□□ 1.81
PCDHGA7Q9Y5G6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
PCDHGA7Q9Y5G6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGA7Q9Y5G6 ABCB10P3-201ENST00000561950 2166 ntBASIC26.36■■□□□ 1.81
PCDHGA7Q9Y5G6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.36■■□□□ 1.81
PCDHGA7Q9Y5G6 MIR7108-201ENST00000614319 87 ntBASIC26.36■■□□□ 1.81
PCDHGA7Q9Y5G6 DUX4L28-201ENST00000623687 678 ntBASIC26.36■■□□□ 1.81
PCDHGA7Q9Y5G6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHGA7Q9Y5G6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA7Q9Y5G6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA7Q9Y5G6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
PCDHGA7Q9Y5G6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGA7Q9Y5G6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA7Q9Y5G6 MIR762-201ENST00000390236 83 ntBASIC26.34■■□□□ 1.81
PCDHGA7Q9Y5G6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDHGA7Q9Y5G6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.34■■□□□ 1.81
PCDHGA7Q9Y5G6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PCDHGA7Q9Y5G6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
PCDHGA7Q9Y5G6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
PCDHGA7Q9Y5G6 AC044849.2-201ENST00000606596 710 ntBASIC26.32■■□□□ 1.8
PCDHGA7Q9Y5G6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA7Q9Y5G6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA7Q9Y5G6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHGA7Q9Y5G6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA7Q9Y5G6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHGA7Q9Y5G6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHGA7Q9Y5G6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA7Q9Y5G6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGA7Q9Y5G6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGA7Q9Y5G6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGA7Q9Y5G6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDHGA7Q9Y5G6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGA7Q9Y5G6 AC005559.1-201ENST00000589661 871 ntBASIC26.28■■□□□ 1.8
PCDHGA7Q9Y5G6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGA7Q9Y5G6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGA7Q9Y5G6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PCDHGA7Q9Y5G6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGA7Q9Y5G6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHGA7Q9Y5G6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGA7Q9Y5G6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHGA7Q9Y5G6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGA7Q9Y5G6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA7Q9Y5G6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
PCDHGA7Q9Y5G6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDHGA7Q9Y5G6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDHGA7Q9Y5G6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA7Q9Y5G6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.79
PCDHGA7Q9Y5G6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.2■■□□□ 1.78
PCDHGA7Q9Y5G6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
PCDHGA7Q9Y5G6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.2■■□□□ 1.78
PCDHGA7Q9Y5G6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGA7Q9Y5G6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGA7Q9Y5G6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.18■■□□□ 1.78
PCDHGA7Q9Y5G6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGA7Q9Y5G6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.17■■□□□ 1.78
PCDHGA7Q9Y5G6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGA7Q9Y5G6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHGA7Q9Y5G6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
PCDHGA7Q9Y5G6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGA7Q9Y5G6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA7Q9Y5G6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGA7Q9Y5G6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.14■■□□□ 1.78
PCDHGA7Q9Y5G6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGA7Q9Y5G6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
PCDHGA7Q9Y5G6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
PCDHGA7Q9Y5G6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
PCDHGA7Q9Y5G6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHGA7Q9Y5G6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PCDHGA7Q9Y5G6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGA7Q9Y5G6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGA7Q9Y5G6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGA7Q9Y5G6 AC139426.1-201ENST00000568218 2529 ntBASIC26.1■■□□□ 1.77
PCDHGA7Q9Y5G6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGA7Q9Y5G6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGA7Q9Y5G6 HLA-V-202ENST00000446817 847 ntBASIC26.08■■□□□ 1.77
PCDHGA7Q9Y5G6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.08■■□□□ 1.77
PCDHGA7Q9Y5G6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
PCDHGA7Q9Y5G6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGA7Q9Y5G6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHGA7Q9Y5G6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.07■■□□□ 1.76
PCDHGA7Q9Y5G6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.07■■□□□ 1.76
PCDHGA7Q9Y5G6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
PCDHGA7Q9Y5G6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHGA7Q9Y5G6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.06■■□□□ 1.76
PCDHGA7Q9Y5G6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.06■■□□□ 1.76
PCDHGA7Q9Y5G6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA7Q9Y5G6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGA7Q9Y5G6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.04■■□□□ 1.76
PCDHGA7Q9Y5G6 WASH5P-204ENST00000632292 975 ntBASIC26.04■■□□□ 1.76
PCDHGA7Q9Y5G6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGA7Q9Y5G6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGA7Q9Y5G6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
PCDHGA7Q9Y5G6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGA7Q9Y5G6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHGA7Q9Y5G6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHGA7Q9Y5G6 ZNRF2P2-203ENST00000454624 420 ntBASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms