RNA–Protein interactions for RNA: ENST00000618035.4

RCC1L-205, Transcript of RCC1 like, humanhuman

TSL 1 (best) BASIC

Gene RCC1L, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-205ENST00000618035 NISCHQ9Y2I1 1504 aa65.61■■■■■ 8.09
RCC1L-205ENST00000618035 CCDC180Q9P1Z9 1646 aa58.42■■■■■ 6.94
RCC1L-205ENST00000618035 ABCC9O60706 1549 aa57.44■■■■■ 6.79
RCC1L-205ENST00000618035 RB1CC1Q8TDY2 1594 aa55.08■■■■■ 6.41
RCC1L-205ENST00000618035 NACADO15069 1562 aa54.96■■■■■ 6.39
RCC1L-205ENST00000618035 DCAF8L2P0C7V8 631 aa54.85■■■■■ 6.37
RCC1L-205ENST00000618035 ZCCHC6Q5VYS8 1495 aaKnown RBP54.6■■■■■ 6.33
RCC1L-205ENST00000618035 MYO15BQ96JP2 1530 aa54.55■■■■■ 6.32
RCC1L-205ENST00000618035 DCAF1Q9Y4B6 1507 aa54.24■■■■■ 6.27
RCC1L-205ENST00000618035 UNC13AQ9UPW8 1703 aa54■■■■■ 6.24
RCC1L-205ENST00000618035 PABPN1Q86U42 306 aaKnown RBP eCLIP53.64■■■■■ 6.18
RCC1L-205ENST00000618035 BICRAQ9NZM4 1560 aa53.56■■■■■ 6.17
RCC1L-205ENST00000618035 SCRIBQ14160 1630 aa53.32■■■■■ 6.13
RCC1L-205ENST00000618035 DNAJC5BQ9UF47 199 aa53.08■■■■■ 6.09
RCC1L-205ENST00000618035 SHROOM4Q9ULL8 1493 aa52.79■■■■■ 6.04
RCC1L-205ENST00000618035 EIF4G1Q04637 1599 aaKnown RBP52.09■■■■■ 5.93
RCC1L-205ENST00000618035 CC2D2AQ9P2K1 1620 aa51.96■■■■■ 5.91
RCC1L-205ENST00000618035 CECR2Q9BXF3 1484 aa51.6■■■■■ 5.85
RCC1L-205ENST00000618035 SMARCA4P51532 1647 aa50.97■■■■■ 5.75
RCC1L-205ENST00000618035 BAZ1AQ9NRL2 1556 aaPredicted RBP50.82■■■■■ 5.73
RCC1L-205ENST00000618035 ATAD2BQ9ULI0 1458 aa50.76■■■■■ 5.72
RCC1L-205ENST00000618035 NCAPD3P42695 1498 aa50.75■■■■■ 5.72
RCC1L-205ENST00000618035 SMARCA2P51531 1590 aa50.61■■■■■ 5.69
RCC1L-205ENST00000618035 MROH2BQ7Z745 1585 aa50.61■■■■■ 5.69
RCC1L-205ENST00000618035 PEG3Q9GZU2 1588 aa50.48■■■■■ 5.67
RCC1L-205ENST00000618035 HMGXB3Q12766 1538 aa50.46■■■■■ 5.67
RCC1L-205ENST00000618035 BAZ1BQ9UIG0 1483 aaKnown RBP50.27■■■■■ 5.64
RCC1L-205ENST00000618035 WIZO95785 1651 aa50.07■■■■■ 5.61
RCC1L-205ENST00000618035 RSF1Q96T23 1441 aaPredicted RBP49.91■■■■■ 5.58
RCC1L-205ENST00000618035 NESP48681 1621 aa49.69■■■■■ 5.54
RCC1L-205ENST00000618035 TOP2AP11388 1531 aaKnown RBP49.44■■■■■ 5.5
RCC1L-205ENST00000618035 ERCC6Q03468 1493 aa49.43■■■■■ 5.5
RCC1L-205ENST00000618035 LAMC3Q9Y6N6 1575 aa49.43■■■■■ 5.5
RCC1L-205ENST00000618035 CADPSQ9ULU8 1353 aa49.24■■■■■ 5.47
RCC1L-205ENST00000618035 KIF21AQ7Z4S6 1674 aa49.08■■■■■ 5.45
RCC1L-205ENST00000618035 PDS5BQ9NTI5 1447 aa49.05■■■■■ 5.44
RCC1L-205ENST00000618035 CUX2O14529 1486 aa49.03■■■■■ 5.44
RCC1L-205ENST00000618035 THOC2Q8NI27 1593 aaKnown RBP48.97■■■■■ 5.43
RCC1L-205ENST00000618035 CFTRP13569 1480 aa48.92■■■■■ 5.42
RCC1L-205ENST00000618035 CCDC88BA6NC98 1476 aa48.9■■■■■ 5.42
RCC1L-205ENST00000618035 FANCD2Q9BXW9 1451 aa48.68■■■■■ 5.38
RCC1L-205ENST00000618035 MRC2Q9UBG0 1479 aa48.61■■■■■ 5.37
RCC1L-205ENST00000618035 CEP164Q9UPV0 1460 aa48.61■■■■■ 5.37
RCC1L-205ENST00000618035 PRDM2Q13029 1718 aa48.55■■■■■ 5.36
RCC1L-205ENST00000618035 WDR62O43379 1518 aa48.5■■■■■ 5.35
RCC1L-205ENST00000618035 SUPT5HO00267 1087 aaKnown RBP48.4■■■■■ 5.34
RCC1L-205ENST00000618035 URB2Q14146 1524 aaKnown RBP48.27■■■■■ 5.32
RCC1L-205ENST00000618035 TOPBP1Q92547 1522 aa47.9■■■■■ 5.26
RCC1L-205ENST00000618035 DNAJC5Q9H3Z4 198 aa47.88■■■■■ 5.25
RCC1L-205ENST00000618035 DNMBPQ6XZF7 1577 aa47.8■■■■■ 5.24
RCC1L-205ENST00000618035 ABCC8Q09428 1581 aa47.78■■■■■ 5.24
RCC1L-205ENST00000618035 IFT140Q96RY7 1462 aa47.6■■■■■ 5.21
RCC1L-205ENST00000618035 ZNF608Q9ULD9 1512 aaPredicted RBP47.52■■■■■ 5.2
RCC1L-205ENST00000618035 POLA1P09884 1462 aaPredicted RBP47.48■■■■■ 5.19
RCC1L-205ENST00000618035 CUX1P39880 1505 aa47.48■■■■■ 5.19
RCC1L-205ENST00000618035 TARBP1Q13395 1621 aaKnown RBP47.44■■■■■ 5.19
RCC1L-205ENST00000618035 FGD5Q6ZNL6 1462 aa47.32■■■■■ 5.17
RCC1L-205ENST00000618035 RAD54L2Q9Y4B4 1467 aa47.31■■■■■ 5.16
RCC1L-205ENST00000618035 EIF4G3O43432 1585 aaKnown RBP47.28■■■■■ 5.16
RCC1L-205ENST00000618035 SOGA1O94964 1423 aa47.24■■■■■ 5.15
RCC1L-205ENST00000618035 AQRO60306 1485 aaKnown RBP eCLIP47.19■■■■■ 5.151e-7■■■■■ 30.9
RCC1L-205ENST00000618035 TDRD9Q8NDG6 1382 aaKnown RBP47.04■■■■■ 5.12
RCC1L-205ENST00000618035 WDR97A6NE52 1622 aa47■■■■■ 5.11
RCC1L-205ENST00000618035 WRNQ14191 1432 aaPredicted RBP eCLIP47■■■■■ 5.11
RCC1L-205ENST00000618035 SYNJ1O43426 1573 aa46.99■■■■■ 5.11
RCC1L-205ENST00000618035 BIVM-ERCC5R4GMW8 1640 aa46.98■■■■■ 5.11
RCC1L-205ENST00000618035 TOP2BQ02880 1626 aa46.97■■■■■ 5.11
RCC1L-205ENST00000618035 OSCARQ8IYS5 282 aa46.95■■■■■ 5.11
RCC1L-205ENST00000618035 ABCA10Q8WWZ4 1543 aa46.84■■■■■ 5.09
RCC1L-205ENST00000618035 CHD1O14646 1710 aa46.76■■■■■ 5.08
RCC1L-205ENST00000618035 SNAPC4Q5SXM2 1469 aa46.71■■■■■ 5.07
RCC1L-205ENST00000618035 ABCA5Q8WWZ7 1642 aa46.71■■■■■ 5.07
RCC1L-205ENST00000618035 GRIN2BQ13224 1484 aa46.7■■■■■ 5.07
RCC1L-205ENST00000618035 GAPVD1Q14C86 1478 aa46.69■■■■■ 5.07
RCC1L-205ENST00000618035 PBRM1Q86U86 1689 aa46.66■■■■■ 5.06
RCC1L-205ENST00000618035 MAGI1Q96QZ7 1491 aaPredicted RBP46.6■■■■■ 5.05
RCC1L-205ENST00000618035 FBLN2P98095 1184 aa46.58■■■■■ 5.05
RCC1L-205ENST00000618035 SYNJ2O15056 1496 aa46.44■■■■■ 5.03
RCC1L-205ENST00000618035 CHMP7Q8WUX9 453 aaPredicted RBP46.4■■■■■ 5.02
RCC1L-205ENST00000618035 RIMBP3CA6NJZ7 1639 aa46.31■■■■■ 5
RCC1L-205ENST00000618035 RIMBP3BA6NNM3 1639 aa46.31■■■■■ 5
RCC1L-205ENST00000618035 RIMBP3Q9UFD9 1639 aa46.31■■■■■ 5
RCC1L-205ENST00000618035 ADAMTS12P58397 1594 aa46.26■■■■■ 5
RCC1L-205ENST00000618035 ARHGEF11O15085 1522 aa46.25■■■■■ 4.99
RCC1L-205ENST00000618035 ERICH3Q5RHP9 1530 aa46.25■■■■■ 4.99
RCC1L-205ENST00000618035 CLASP1Q7Z460 1538 aa46.24■■■■■ 4.99
RCC1L-205ENST00000618035 TRIM41Q8WV44 630 aa46.16■■■■■ 4.98
RCC1L-205ENST00000618035 GRIN2AQ12879 1464 aa46.13■■■■■ 4.98
RCC1L-205ENST00000618035 FHAD1B1AJZ9 1412 aa46.12■■■■■ 4.97
RCC1L-205ENST00000618035 KIF27Q86VH2 1401 aa46■■■■■ 4.95
RCC1L-205ENST00000618035 CEP170Q5SW79 1584 aa45.97■■■■■ 4.95
RCC1L-205ENST00000618035 NUP160Q12769 1436 aa45.96■■■■■ 4.95
RCC1L-205ENST00000618035 IGF1RP08069 1367 aa45.94■■■■■ 4.94
RCC1L-205ENST00000618035 ARAP1Q96P48 1450 aa45.89■■■■■ 4.94
RCC1L-205ENST00000618035 CYB5RLQ6IPT4 315 aa45.81■■■■■ 4.92
RCC1L-205ENST00000618035 CUL7Q14999 1698 aa45.77■■■■■ 4.92
RCC1L-205ENST00000618035 RUSC2Q8N2Y8 1516 aa45.68■■■■■ 4.9
RCC1L-205ENST00000618035 SHROOM2Q13796 1616 aa45.67■■■■■ 4.9
RCC1L-205ENST00000618035 ERCC6L2Q5T890 1561 aa45.65■■■■■ 4.9
RCC1L-205ENST00000618035 CARMIL1Q5VZK9 1371 aa45.61■■■■■ 4.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms