RNA–Protein interactions for RNA: ENST00000451368.1

AC004540.2-201, humanhuman

TSL 2 BASIC

Gene AC004540.2, Length 611 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.2-201ENST00000451368 NISCHQ9Y2I1 1504 aa65■■■■■ 8
AC004540.2-201ENST00000451368 CCDC180Q9P1Z9 1646 aa58.22■■■■■ 6.91
AC004540.2-201ENST00000451368 ABCC9O60706 1549 aa57.75■■■■■ 6.83
AC004540.2-201ENST00000451368 RB1CC1Q8TDY2 1594 aa55.2■■■■■ 6.43
AC004540.2-201ENST00000451368 NACADO15069 1562 aa54.9■■■■■ 6.38
AC004540.2-201ENST00000451368 DCAF8L2P0C7V8 631 aa54.65■■■■■ 6.34
AC004540.2-201ENST00000451368 MYO15BQ96JP2 1530 aa54.28■■■■■ 6.28
AC004540.2-201ENST00000451368 ZCCHC6Q5VYS8 1495 aaKnown RBP53.99■■■■■ 6.23
AC004540.2-201ENST00000451368 UNC13AQ9UPW8 1703 aa53.91■■■■■ 6.22
AC004540.2-201ENST00000451368 PABPN1Q86U42 306 aaKnown RBP eCLIP53.76■■■■■ 6.2
AC004540.2-201ENST00000451368 DCAF1Q9Y4B6 1507 aa53.73■■■■■ 6.19
AC004540.2-201ENST00000451368 DNAJC5BQ9UF47 199 aa53.65■■■■■ 6.18
AC004540.2-201ENST00000451368 BICRAQ9NZM4 1560 aa53.51■■■■■ 6.16
AC004540.2-201ENST00000451368 SCRIBQ14160 1630 aa53.06■■■■■ 6.09
AC004540.2-201ENST00000451368 SHROOM4Q9ULL8 1493 aa52.93■■■■■ 6.06
AC004540.2-201ENST00000451368 EIF4G1Q04637 1599 aaKnown RBP52.2■■■■■ 5.95
AC004540.2-201ENST00000451368 CC2D2AQ9P2K1 1620 aa52.19■■■■■ 5.95
AC004540.2-201ENST00000451368 CECR2Q9BXF3 1484 aa51.99■■■■■ 5.91
AC004540.2-201ENST00000451368 SMARCA4P51532 1647 aa50.65■■■■■ 5.7
AC004540.2-201ENST00000451368 NCAPD3P42695 1498 aa50.63■■■■■ 5.7
AC004540.2-201ENST00000451368 ATAD2BQ9ULI0 1458 aa50.55■■■■■ 5.68
AC004540.2-201ENST00000451368 SMARCA2P51531 1590 aa50.5■■■■■ 5.67
AC004540.2-201ENST00000451368 BAZ1AQ9NRL2 1556 aaPredicted RBP50.47■■■■■ 5.67
AC004540.2-201ENST00000451368 HMGXB3Q12766 1538 aa50.36■■■■■ 5.65
AC004540.2-201ENST00000451368 PEG3Q9GZU2 1588 aa50.14■■■■■ 5.62
AC004540.2-201ENST00000451368 BAZ1BQ9UIG0 1483 aaKnown RBP50.14■■■■■ 5.62
AC004540.2-201ENST00000451368 MROH2BQ7Z745 1585 aa50.08■■■■■ 5.61
AC004540.2-201ENST00000451368 ERCC6Q03468 1493 aa49.88■■■■■ 5.58
AC004540.2-201ENST00000451368 NESP48681 1621 aa49.7■■■■■ 5.55
AC004540.2-201ENST00000451368 CUX2O14529 1486 aa49.63■■■■■ 5.53
AC004540.2-201ENST00000451368 WIZO95785 1651 aa49.51■■■■■ 5.52
AC004540.2-201ENST00000451368 LAMC3Q9Y6N6 1575 aa49.49■■■■■ 5.51
AC004540.2-201ENST00000451368 RSF1Q96T23 1441 aaPredicted RBP49.18■■■■■ 5.46
AC004540.2-201ENST00000451368 THOC2Q8NI27 1593 aaKnown RBP49.17■■■■■ 5.46
AC004540.2-201ENST00000451368 PDS5BQ9NTI5 1447 aa49.17■■■■■ 5.46
AC004540.2-201ENST00000451368 KIF21AQ7Z4S6 1674 aa49.13■■■■■ 5.46
AC004540.2-201ENST00000451368 CADPSQ9ULU8 1353 aa49.12■■■■■ 5.45
AC004540.2-201ENST00000451368 DNAJC5Q9H3Z4 198 aa49.01■■■■■ 5.44
AC004540.2-201ENST00000451368 TOP2AP11388 1531 aaKnown RBP48.96■■■■■ 5.43
AC004540.2-201ENST00000451368 MRC2Q9UBG0 1479 aa48.74■■■■■ 5.39
AC004540.2-201ENST00000451368 CFTRP13569 1480 aa48.66■■■■■ 5.38
AC004540.2-201ENST00000451368 CEP164Q9UPV0 1460 aa48.65■■■■■ 5.38
AC004540.2-201ENST00000451368 FANCD2Q9BXW9 1451 aa48.6■■■■■ 5.37
AC004540.2-201ENST00000451368 WDR62O43379 1518 aa48.59■■■■■ 5.37
AC004540.2-201ENST00000451368 CCDC88BA6NC98 1476 aa48.34■■■■■ 5.33
AC004540.2-201ENST00000451368 PRDM2Q13029 1718 aa48.29■■■■■ 5.32
AC004540.2-201ENST00000451368 URB2Q14146 1524 aaKnown RBP48.15■■■■■ 5.3
AC004540.2-201ENST00000451368 TOPBP1Q92547 1522 aa47.71■■■■■ 5.23
AC004540.2-201ENST00000451368 ABCC8Q09428 1581 aa47.66■■■■■ 5.22
AC004540.2-201ENST00000451368 IFT140Q96RY7 1462 aa47.63■■■■■ 5.22
AC004540.2-201ENST00000451368 DNMBPQ6XZF7 1577 aa47.62■■■■■ 5.21
AC004540.2-201ENST00000451368 ZNF608Q9ULD9 1512 aaPredicted RBP47.47■■■■■ 5.19
AC004540.2-201ENST00000451368 OSCARQ8IYS5 282 aa47.36■■■■■ 5.17
AC004540.2-201ENST00000451368 SUPT5HO00267 1087 aaKnown RBP47.32■■■■■ 5.17
AC004540.2-201ENST00000451368 EIF4G3O43432 1585 aaKnown RBP47.31■■■■■ 5.16
AC004540.2-201ENST00000451368 TARBP1Q13395 1621 aaKnown RBP47.26■■■■■ 5.16
AC004540.2-201ENST00000451368 POLA1P09884 1462 aaPredicted RBP47.26■■■■■ 5.16
AC004540.2-201ENST00000451368 TRIM41Q8WV44 630 aa47.09■■■■■ 5.13
AC004540.2-201ENST00000451368 AQRO60306 1485 aaKnown RBP eCLIP47.08■■■■■ 5.13
AC004540.2-201ENST00000451368 RAD54L2Q9Y4B4 1467 aa47.04■■■■■ 5.12
AC004540.2-201ENST00000451368 CUX1P39880 1505 aa47.04■■■■■ 5.12
AC004540.2-201ENST00000451368 FGD5Q6ZNL6 1462 aa47.03■■■■■ 5.12
AC004540.2-201ENST00000451368 SOGA1O94964 1423 aa47.03■■■■■ 5.12
AC004540.2-201ENST00000451368 WDR97A6NE52 1622 aa46.87■■■■■ 5.09
AC004540.2-201ENST00000451368 TDRD9Q8NDG6 1382 aaKnown RBP46.86■■■■■ 5.09
AC004540.2-201ENST00000451368 CHD1O14646 1710 aa46.86■■■■■ 5.09
AC004540.2-201ENST00000451368 RIMBP3CA6NJZ7 1639 aa46.76■■■■■ 5.08
AC004540.2-201ENST00000451368 RIMBP3BA6NNM3 1639 aa46.76■■■■■ 5.08
AC004540.2-201ENST00000451368 RIMBP3Q9UFD9 1639 aa46.76■■■■■ 5.08
AC004540.2-201ENST00000451368 FBLN2P98095 1184 aa46.72■■■■■ 5.07
AC004540.2-201ENST00000451368 SNAPC4Q5SXM2 1469 aa46.68■■■■■ 5.06
AC004540.2-201ENST00000451368 ARHGEF11O15085 1522 aa46.65■■■■■ 5.06
AC004540.2-201ENST00000451368 GRIN2BQ13224 1484 aa46.61■■■■■ 5.05
AC004540.2-201ENST00000451368 MAGI1Q96QZ7 1491 aaPredicted RBP46.58■■■■■ 5.05
AC004540.2-201ENST00000451368 ABCA10Q8WWZ4 1543 aa46.52■■■■■ 5.04
AC004540.2-201ENST00000451368 GAPVD1Q14C86 1478 aa46.49■■■■■ 5.03
AC004540.2-201ENST00000451368 PBRM1Q86U86 1689 aa46.49■■■■■ 5.03
AC004540.2-201ENST00000451368 ABCA5Q8WWZ7 1642 aa46.44■■■■■ 5.03
AC004540.2-201ENST00000451368 BIVM-ERCC5R4GMW8 1640 aa46.44■■■■■ 5.03
AC004540.2-201ENST00000451368 CHMP7Q8WUX9 453 aaPredicted RBP46.44■■■■■ 5.02
AC004540.2-201ENST00000451368 WRNQ14191 1432 aaPredicted RBP eCLIP46.44■■■■■ 5.02
AC004540.2-201ENST00000451368 TOP2BQ02880 1626 aa46.43■■■■■ 5.02
AC004540.2-201ENST00000451368 SYNJ2O15056 1496 aa46.41■■■■■ 5.02
AC004540.2-201ENST00000451368 SYNJ1O43426 1573 aa46.38■■■■■ 5.01
AC004540.2-201ENST00000451368 CLASP1Q7Z460 1538 aa46.32■■■■■ 5.01
AC004540.2-201ENST00000451368 CYB5RLQ6IPT4 315 aa46.22■■■■■ 4.99
AC004540.2-201ENST00000451368 ARAP1Q96P48 1450 aa46.21■■■■■ 4.99
AC004540.2-201ENST00000451368 ADAMTS12P58397 1594 aa46.07■■■■■ 4.97
AC004540.2-201ENST00000451368 GRIN2AQ12879 1464 aa46.01■■■■■ 4.96
AC004540.2-201ENST00000451368 ERICH3Q5RHP9 1530 aa45.96■■■■■ 4.95
AC004540.2-201ENST00000451368 FHAD1B1AJZ9 1412 aa45.92■■■■■ 4.94
AC004540.2-201ENST00000451368 CEP170Q5SW79 1584 aa45.83■■■■■ 4.93
AC004540.2-201ENST00000451368 NUP160Q12769 1436 aa45.82■■■■■ 4.93
AC004540.2-201ENST00000451368 TRHP20396 242 aaPredicted RBP45.62■■■■■ 4.89
AC004540.2-201ENST00000451368 SHROOM2Q13796 1616 aa45.59■■■■■ 4.89
AC004540.2-201ENST00000451368 ERCC6L2Q5T890 1561 aa45.59■■■■■ 4.89
AC004540.2-201ENST00000451368 KIF27Q86VH2 1401 aa45.53■■■■■ 4.88
AC004540.2-201ENST00000451368 RUSC2Q8N2Y8 1516 aa45.42■■■■■ 4.86
AC004540.2-201ENST00000451368 CUL7Q14999 1698 aa45.42■■■■■ 4.86
AC004540.2-201ENST00000451368 IGF1RP08069 1367 aa45.38■■■■■ 4.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms