Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
UPF3BQ9BZI7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
UPF3BQ9BZI7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF3BQ9BZI7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF3BQ9BZI7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF3BQ9BZI7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
UPF3BQ9BZI7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF3BQ9BZI7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF3BQ9BZI7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF3BQ9BZI7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.74■■■□□ 2.67
UPF3BQ9BZI7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
UPF3BQ9BZI7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
UPF3BQ9BZI7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
UPF3BQ9BZI7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
UPF3BQ9BZI7 RARRES2P7-201ENST00000567349 469 ntBASIC31.72■■■□□ 2.67
UPF3BQ9BZI7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
UPF3BQ9BZI7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.71■■■□□ 2.67
UPF3BQ9BZI7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
UPF3BQ9BZI7 AL135925.1-201ENST00000605920 1701 ntBASIC31.7■■■□□ 2.67
UPF3BQ9BZI7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.69■■■□□ 2.66
UPF3BQ9BZI7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.69■■■□□ 2.66
UPF3BQ9BZI7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.69■■■□□ 2.66
UPF3BQ9BZI7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.68■■■□□ 2.66
UPF3BQ9BZI7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
UPF3BQ9BZI7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
UPF3BQ9BZI7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
UPF3BQ9BZI7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
UPF3BQ9BZI7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
UPF3BQ9BZI7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
UPF3BQ9BZI7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
UPF3BQ9BZI7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
UPF3BQ9BZI7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.65■■■□□ 2.66
UPF3BQ9BZI7 SETD8P1-201ENST00000623146 1180 ntBASIC31.65■■■□□ 2.66
UPF3BQ9BZI7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.65■■■□□ 2.66
UPF3BQ9BZI7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
UPF3BQ9BZI7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
UPF3BQ9BZI7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.63■■■□□ 2.65
UPF3BQ9BZI7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
UPF3BQ9BZI7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
UPF3BQ9BZI7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.62■■■□□ 2.65
UPF3BQ9BZI7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
UPF3BQ9BZI7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
UPF3BQ9BZI7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
UPF3BQ9BZI7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.6■■■□□ 2.65
UPF3BQ9BZI7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
UPF3BQ9BZI7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
UPF3BQ9BZI7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
UPF3BQ9BZI7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.57■■■□□ 2.64
UPF3BQ9BZI7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.57■■■□□ 2.64
UPF3BQ9BZI7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.56■■■□□ 2.64
UPF3BQ9BZI7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
UPF3BQ9BZI7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
UPF3BQ9BZI7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
UPF3BQ9BZI7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
UPF3BQ9BZI7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
UPF3BQ9BZI7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
UPF3BQ9BZI7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
UPF3BQ9BZI7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
UPF3BQ9BZI7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
UPF3BQ9BZI7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
UPF3BQ9BZI7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
UPF3BQ9BZI7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
UPF3BQ9BZI7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
UPF3BQ9BZI7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.48■■■□□ 2.63
UPF3BQ9BZI7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
UPF3BQ9BZI7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
UPF3BQ9BZI7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
UPF3BQ9BZI7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.46■■■□□ 2.63
UPF3BQ9BZI7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
UPF3BQ9BZI7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.46■■■□□ 2.63
UPF3BQ9BZI7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
UPF3BQ9BZI7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
UPF3BQ9BZI7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
UPF3BQ9BZI7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
UPF3BQ9BZI7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
UPF3BQ9BZI7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
UPF3BQ9BZI7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
UPF3BQ9BZI7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
UPF3BQ9BZI7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
UPF3BQ9BZI7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
UPF3BQ9BZI7 AC136428.2-201ENST00000563187 214 ntBASIC31.4■■■□□ 2.62
UPF3BQ9BZI7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
UPF3BQ9BZI7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
UPF3BQ9BZI7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
UPF3BQ9BZI7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
UPF3BQ9BZI7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.38■■■□□ 2.61
UPF3BQ9BZI7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
UPF3BQ9BZI7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
UPF3BQ9BZI7 CAHM-201ENST00000604200 896 ntBASIC31.36■■■□□ 2.61
UPF3BQ9BZI7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
UPF3BQ9BZI7 AL391121.1-201ENST00000607967 1349 ntBASIC31.35■■■□□ 2.61
UPF3BQ9BZI7 AC097358.2-201ENST00000607541 1159 ntBASIC31.33■■■□□ 2.61
UPF3BQ9BZI7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.32■■■□□ 2.6
UPF3BQ9BZI7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.32■■■□□ 2.6
UPF3BQ9BZI7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.31■■■□□ 2.6
UPF3BQ9BZI7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
UPF3BQ9BZI7 AC010864.1-201ENST00000609407 1511 ntBASIC31.29■■■□□ 2.6
UPF3BQ9BZI7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
UPF3BQ9BZI7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
UPF3BQ9BZI7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms