Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
PTCD2Q8WV60 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PTCD2Q8WV60 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.99■■□□□ 1.91
PTCD2Q8WV60 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PTCD2Q8WV60 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PTCD2Q8WV60 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.97■■□□□ 1.91
PTCD2Q8WV60 ABCB10P1-201ENST00000614297 2181 ntBASIC26.97■■□□□ 1.91
PTCD2Q8WV60 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
PTCD2Q8WV60 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.94■■□□□ 1.9
PTCD2Q8WV60 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PTCD2Q8WV60 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
PTCD2Q8WV60 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PTCD2Q8WV60 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PTCD2Q8WV60 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PTCD2Q8WV60 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PTCD2Q8WV60 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PTCD2Q8WV60 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PTCD2Q8WV60 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PTCD2Q8WV60 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.9■■□□□ 1.9
PTCD2Q8WV60 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PTCD2Q8WV60 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD2Q8WV60 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD2Q8WV60 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD2Q8WV60 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PTCD2Q8WV60 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
PTCD2Q8WV60 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTCD2Q8WV60 RPS2P35-201ENST00000443417 897 ntBASIC26.87■■□□□ 1.89
PTCD2Q8WV60 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.87■■□□□ 1.89
PTCD2Q8WV60 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PTCD2Q8WV60 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.87■■□□□ 1.89
PTCD2Q8WV60 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD2Q8WV60 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD2Q8WV60 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD2Q8WV60 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.86■■□□□ 1.89
PTCD2Q8WV60 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD2Q8WV60 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCD2Q8WV60 ST7-AS1-201ENST00000456775 1889 ntBASIC26.85■■□□□ 1.89
PTCD2Q8WV60 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PTCD2Q8WV60 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PTCD2Q8WV60 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.84■■□□□ 1.89
PTCD2Q8WV60 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
PTCD2Q8WV60 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
PTCD2Q8WV60 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
PTCD2Q8WV60 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD2Q8WV60 AL162393.1-201ENST00000437852 946 ntBASIC26.81■■□□□ 1.88
PTCD2Q8WV60 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.8■■□□□ 1.88
PTCD2Q8WV60 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
PTCD2Q8WV60 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.8■■□□□ 1.88
PTCD2Q8WV60 AL135925.1-201ENST00000605920 1701 ntBASIC26.79■■□□□ 1.88
PTCD2Q8WV60 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCD2Q8WV60 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCD2Q8WV60 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.79■■□□□ 1.88
PTCD2Q8WV60 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PTCD2Q8WV60 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PTCD2Q8WV60 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
PTCD2Q8WV60 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.78■■□□□ 1.88
PTCD2Q8WV60 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
PTCD2Q8WV60 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PTCD2Q8WV60 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD2Q8WV60 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD2Q8WV60 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.77■■□□□ 1.88
PTCD2Q8WV60 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.77■■□□□ 1.88
PTCD2Q8WV60 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PTCD2Q8WV60 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PTCD2Q8WV60 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
PTCD2Q8WV60 MIR762-201ENST00000390236 83 ntBASIC26.74■■□□□ 1.87
PTCD2Q8WV60 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PTCD2Q8WV60 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
PTCD2Q8WV60 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
PTCD2Q8WV60 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PTCD2Q8WV60 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.72■■□□□ 1.87
PTCD2Q8WV60 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PTCD2Q8WV60 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PTCD2Q8WV60 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PTCD2Q8WV60 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PTCD2Q8WV60 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
PTCD2Q8WV60 ABCB10P3-201ENST00000561950 2166 ntBASIC26.7■■□□□ 1.86
PTCD2Q8WV60 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PTCD2Q8WV60 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
PTCD2Q8WV60 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.69■■□□□ 1.86
PTCD2Q8WV60 AP006261.1-201ENST00000584783 668 ntBASIC26.69■■□□□ 1.86
PTCD2Q8WV60 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PTCD2Q8WV60 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PTCD2Q8WV60 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
PTCD2Q8WV60 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.68■■□□□ 1.86
PTCD2Q8WV60 DUX4L28-201ENST00000623687 678 ntBASIC26.68■■□□□ 1.86
PTCD2Q8WV60 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.68■■□□□ 1.86
PTCD2Q8WV60 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PTCD2Q8WV60 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.67■■□□□ 1.86
PTCD2Q8WV60 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PTCD2Q8WV60 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.66■■□□□ 1.86
PTCD2Q8WV60 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
PTCD2Q8WV60 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PTCD2Q8WV60 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PTCD2Q8WV60 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PTCD2Q8WV60 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PTCD2Q8WV60 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PTCD2Q8WV60 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PTCD2Q8WV60 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD2Q8WV60 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms