RNA–Protein interactions for RNA: ENST00000443417.1

RPS2P35-201, Transcript of ribosomal protein S2 pseudogene 35, humanhuman

BASIC

Gene RPS2P35, Length 897 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS2P35-201ENST00000443417 NISCHQ9Y2I1 1504 aa67.72■■■■■ 8.43
RPS2P35-201ENST00000443417 ABCC9O60706 1549 aa61.28■■■■■ 7.4
RPS2P35-201ENST00000443417 CCDC180Q9P1Z9 1646 aa60.82■■■■■ 7.33
RPS2P35-201ENST00000443417 RB1CC1Q8TDY2 1594 aa58.08■■■■■ 6.89
RPS2P35-201ENST00000443417 DNAJC5BQ9UF47 199 aa57.83■■■■■ 6.85
RPS2P35-201ENST00000443417 NACADO15069 1562 aa57.6■■■■■ 6.81
RPS2P35-201ENST00000443417 DCAF8L2P0C7V8 631 aa57.47■■■■■ 6.79
RPS2P35-201ENST00000443417 PABPN1Q86U42 306 aaKnown RBP eCLIP57.08■■■■■ 6.73
RPS2P35-201ENST00000443417 UNC13AQ9UPW8 1703 aa56.82■■■■■ 6.69
RPS2P35-201ENST00000443417 MYO15BQ96JP2 1530 aa56.64■■■■■ 6.66
RPS2P35-201ENST00000443417 BICRAQ9NZM4 1560 aa56.46■■■■■ 6.63
RPS2P35-201ENST00000443417 ZCCHC6Q5VYS8 1495 aaKnown RBP56.03■■■■■ 6.56
RPS2P35-201ENST00000443417 DCAF1Q9Y4B6 1507 aa55.82■■■■■ 6.53
RPS2P35-201ENST00000443417 SCRIBQ14160 1630 aa55.53■■■■■ 6.48
RPS2P35-201ENST00000443417 SHROOM4Q9ULL8 1493 aa55.51■■■■■ 6.48
RPS2P35-201ENST00000443417 CC2D2AQ9P2K1 1620 aa55.29■■■■■ 6.44
RPS2P35-201ENST00000443417 CECR2Q9BXF3 1484 aa55.2■■■■■ 6.43
RPS2P35-201ENST00000443417 EIF4G1Q04637 1599 aaKnown RBP55.08■■■■■ 6.41
RPS2P35-201ENST00000443417 DNAJC5Q9H3Z4 198 aa53.26■■■■■ 6.12
RPS2P35-201ENST00000443417 NCAPD3P42695 1498 aa53.21■■■■■ 6.11
RPS2P35-201ENST00000443417 ATAD2BQ9ULI0 1458 aa53.03■■■■■ 6.08
RPS2P35-201ENST00000443417 ERCC6Q03468 1493 aa52.9■■■■■ 6.06
RPS2P35-201ENST00000443417 SMARCA4P51532 1647 aa52.88■■■■■ 6.06
RPS2P35-201ENST00000443417 CUX2O14529 1486 aa52.83■■■■■ 6.05
RPS2P35-201ENST00000443417 SMARCA2P51531 1590 aa52.82■■■■■ 6.05
RPS2P35-201ENST00000443417 HMGXB3Q12766 1538 aa52.74■■■■■ 6.03
RPS2P35-201ENST00000443417 NESP48681 1621 aa52.57■■■■■ 6.01
RPS2P35-201ENST00000443417 BAZ1AQ9NRL2 1556 aaPredicted RBP52.55■■■■■ 6
RPS2P35-201ENST00000443417 BAZ1BQ9UIG0 1483 aaKnown RBP52.5■■■■■ 5.99
RPS2P35-201ENST00000443417 PEG3Q9GZU2 1588 aa52.31■■■■■ 5.96
RPS2P35-201ENST00000443417 MROH2BQ7Z745 1585 aa52.22■■■■■ 5.95
RPS2P35-201ENST00000443417 LAMC3Q9Y6N6 1575 aa52.03■■■■■ 5.92
RPS2P35-201ENST00000443417 THOC2Q8NI27 1593 aaKnown RBP52■■■■■ 5.92
RPS2P35-201ENST00000443417 KIF21AQ7Z4S6 1674 aa51.83■■■■■ 5.89
RPS2P35-201ENST00000443417 PDS5BQ9NTI5 1447 aa51.78■■■■■ 5.88
RPS2P35-201ENST00000443417 CADPSQ9ULU8 1353 aa51.61■■■■■ 5.85
RPS2P35-201ENST00000443417 WIZO95785 1651 aa51.59■■■■■ 5.85
RPS2P35-201ENST00000443417 MRC2Q9UBG0 1479 aa51.35■■■■■ 5.81
RPS2P35-201ENST00000443417 WDR62O43379 1518 aa51.22■■■■■ 5.79
RPS2P35-201ENST00000443417 CEP164Q9UPV0 1460 aa51.09■■■■■ 5.77
RPS2P35-201ENST00000443417 FANCD2Q9BXW9 1451 aa51.03■■■■■ 5.76
RPS2P35-201ENST00000443417 RSF1Q96T23 1441 aaPredicted RBP51.03■■■■■ 5.76
RPS2P35-201ENST00000443417 CFTRP13569 1480 aa50.94■■■■■ 5.75
RPS2P35-201ENST00000443417 TRIM41Q8WV44 630 aa50.88■■■■■ 5.74
RPS2P35-201ENST00000443417 TOP2AP11388 1531 aaKnown RBP50.85■■■■■ 5.73
RPS2P35-201ENST00000443417 URB2Q14146 1524 aaKnown RBP50.65■■■■■ 5.7
RPS2P35-201ENST00000443417 OSCARQ8IYS5 282 aa50.47■■■■■ 5.67
RPS2P35-201ENST00000443417 PRDM2Q13029 1718 aa50.35■■■■■ 5.65
RPS2P35-201ENST00000443417 CCDC88BA6NC98 1476 aa50.33■■■■■ 5.65
RPS2P35-201ENST00000443417 ZNF608Q9ULD9 1512 aaPredicted RBP50.11■■■■■ 5.61
RPS2P35-201ENST00000443417 IFT140Q96RY7 1462 aa50.08■■■■■ 5.61
RPS2P35-201ENST00000443417 TOPBP1Q92547 1522 aa50.03■■■■■ 5.6
RPS2P35-201ENST00000443417 ABCC8Q09428 1581 aa49.83■■■■■ 5.57
RPS2P35-201ENST00000443417 RIMBP3CA6NJZ7 1639 aa49.82■■■■■ 5.57
RPS2P35-201ENST00000443417 RIMBP3BA6NNM3 1639 aa49.82■■■■■ 5.57
RPS2P35-201ENST00000443417 RIMBP3Q9UFD9 1639 aa49.82■■■■■ 5.57
RPS2P35-201ENST00000443417 DNMBPQ6XZF7 1577 aa49.79■■■■■ 5.56
RPS2P35-201ENST00000443417 EIF4G3O43432 1585 aaKnown RBP49.75■■■■■ 5.55
RPS2P35-201ENST00000443417 AQRO60306 1485 aaKnown RBP eCLIP49.63■■■■■ 5.53
RPS2P35-201ENST00000443417 ARHGEF11O15085 1522 aa49.62■■■■■ 5.53
RPS2P35-201ENST00000443417 TARBP1Q13395 1621 aaKnown RBP49.59■■■■■ 5.53
RPS2P35-201ENST00000443417 POLA1P09884 1462 aaPredicted RBP49.5■■■■■ 5.51
RPS2P35-201ENST00000443417 CHD1O14646 1710 aa49.46■■■■■ 5.51
RPS2P35-201ENST00000443417 FBLN2P98095 1184 aa49.41■■■■■ 5.5
RPS2P35-201ENST00000443417 RAD54L2Q9Y4B4 1467 aa49.38■■■■■ 5.5
RPS2P35-201ENST00000443417 CYB5RLQ6IPT4 315 aa49.37■■■■■ 5.49
RPS2P35-201ENST00000443417 SOGA1O94964 1423 aa49.29■■■■■ 5.48
RPS2P35-201ENST00000443417 TDRD9Q8NDG6 1382 aaKnown RBP49.28■■■■■ 5.48
RPS2P35-201ENST00000443417 FGD5Q6ZNL6 1462 aa49.16■■■■■ 5.46
RPS2P35-201ENST00000443417 ARAP1Q96P48 1450 aa49.12■■■■■ 5.45
RPS2P35-201ENST00000443417 CUX1P39880 1505 aa49.07■■■■■ 5.45
RPS2P35-201ENST00000443417 SNAPC4Q5SXM2 1469 aa49.06■■■■■ 5.44
RPS2P35-201ENST00000443417 WDR97A6NE52 1622 aa48.96■■■■■ 5.43
RPS2P35-201ENST00000443417 CHMP7Q8WUX9 453 aaPredicted RBP48.94■■■■■ 5.43
RPS2P35-201ENST00000443417 TRHP20396 242 aaPredicted RBP48.92■■■■■ 5.42
RPS2P35-201ENST00000443417 MAGI1Q96QZ7 1491 aaPredicted RBP48.86■■■■■ 5.41
RPS2P35-201ENST00000443417 GRIN2BQ13224 1484 aa48.86■■■■■ 5.41
RPS2P35-201ENST00000443417 CLASP1Q7Z460 1538 aa48.85■■■■■ 5.41
RPS2P35-201ENST00000443417 SYNJ1O43426 1573 aa48.78■■■■■ 5.4
RPS2P35-201ENST00000443417 SYNJ2O15056 1496 aa48.74■■■■■ 5.39
RPS2P35-201ENST00000443417 SUPT5HO00267 1087 aaKnown RBP48.67■■■■■ 5.38
RPS2P35-201ENST00000443417 GAPVD1Q14C86 1478 aa48.67■■■■■ 5.38
RPS2P35-201ENST00000443417 PBRM1Q86U86 1689 aa48.64■■■■■ 5.38
RPS2P35-201ENST00000443417 ABCA10Q8WWZ4 1543 aa48.54■■■■■ 5.36
RPS2P35-201ENST00000443417 ABCA5Q8WWZ7 1642 aa48.49■■■■■ 5.35
RPS2P35-201ENST00000443417 WRNQ14191 1432 aaPredicted RBP eCLIP48.31■■■■■ 5.32
RPS2P35-201ENST00000443417 GRIN2AQ12879 1464 aa48.23■■■■■ 5.31
RPS2P35-201ENST00000443417 ADAMTS12P58397 1594 aa48.16■■■■■ 5.3
RPS2P35-201ENST00000443417 ERCC6L2Q5T890 1561 aa48.16■■■■■ 5.3
RPS2P35-201ENST00000443417 TOP2BQ02880 1626 aa48.15■■■■■ 5.3
RPS2P35-201ENST00000443417 BIVM-ERCC5R4GMW8 1640 aa48.14■■■■■ 5.3
RPS2P35-201ENST00000443417 CEP170Q5SW79 1584 aa48.1■■■■■ 5.29
RPS2P35-201ENST00000443417 NUP160Q12769 1436 aa48.07■■■■■ 5.29
RPS2P35-201ENST00000443417 FHAD1B1AJZ9 1412 aa48.02■■■■■ 5.28
RPS2P35-201ENST00000443417 ERICH3Q5RHP9 1530 aa47.91■■■■■ 5.26
RPS2P35-201ENST00000443417 SHROOM2Q13796 1616 aa47.88■■■■■ 5.25
RPS2P35-201ENST00000443417 PRG4Q92954 1404 aaPredicted RBP47.7■■■■■ 5.23
RPS2P35-201ENST00000443417 AEBP2Q6ZN18 517 aaPredicted RBP47.69■■■■■ 5.22
RPS2P35-201ENST00000443417 JPH4Q96JJ6 628 aa47.65■■■■■ 5.22
RPS2P35-201ENST00000443417 RUSC2Q8N2Y8 1516 aa47.48■■■■■ 5.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms