RNA–Protein interactions for RNA: ENST00000562238.5

ECI1-203, Transcript of enoyl-CoA delta isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene ECI1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECI1-203ENST00000562238 NISCHQ9Y2I1 1504 aa66.62■■■■■ 8.25
ECI1-203ENST00000562238 CCDC180Q9P1Z9 1646 aa59.51■■■■■ 7.12
ECI1-203ENST00000562238 ABCC9O60706 1549 aa58.75■■■■■ 7
ECI1-203ENST00000562238 RB1CC1Q8TDY2 1594 aa56.21■■■■■ 6.59
ECI1-203ENST00000562238 NACADO15069 1562 aa55.99■■■■■ 6.55
ECI1-203ENST00000562238 DCAF8L2P0C7V8 631 aa55.77■■■■■ 6.52
ECI1-203ENST00000562238 MYO15BQ96JP2 1530 aa55.46■■■■■ 6.47
ECI1-203ENST00000562238 ZCCHC6Q5VYS8 1495 aaKnown RBP55.39■■■■■ 6.46
ECI1-203ENST00000562238 UNC13AQ9UPW8 1703 aa55.16■■■■■ 6.42
ECI1-203ENST00000562238 DCAF1Q9Y4B6 1507 aa55.05■■■■■ 6.4
ECI1-203ENST00000562238 PABPN1Q86U42 306 aaKnown RBP eCLIP54.77■■■■■ 6.36
ECI1-203ENST00000562238 BICRAQ9NZM4 1560 aa54.67■■■■■ 6.34
ECI1-203ENST00000562238 DNAJC5BQ9UF47 199 aa54.46■■■■■ 6.31
ECI1-203ENST00000562238 SCRIBQ14160 1630 aa54.3■■■■■ 6.28
ECI1-203ENST00000562238 SHROOM4Q9ULL8 1493 aa53.85■■■■■ 6.21
ECI1-203ENST00000562238 EIF4G1Q04637 1599 aaKnown RBP53.2■■■■■ 6.11
ECI1-203ENST00000562238 CC2D2AQ9P2K1 1620 aa53.14■■■■■ 6.1
ECI1-203ENST00000562238 CECR2Q9BXF3 1484 aa52.81■■■■■ 6.04
ECI1-203ENST00000562238 SMARCA4P51532 1647 aa51.86■■■■■ 5.89
ECI1-203ENST00000562238 NCAPD3P42695 1498 aa51.67■■■■■ 5.86
ECI1-203ENST00000562238 ATAD2BQ9ULI0 1458 aa51.66■■■■■ 5.86
ECI1-203ENST00000562238 BAZ1AQ9NRL2 1556 aaPredicted RBP51.64■■■■■ 5.86
ECI1-203ENST00000562238 SMARCA2P51531 1590 aa51.53■■■■■ 5.84
ECI1-203ENST00000562238 HMGXB3Q12766 1538 aa51.41■■■■■ 5.82
ECI1-203ENST00000562238 MROH2BQ7Z745 1585 aa51.39■■■■■ 5.82
ECI1-203ENST00000562238 PEG3Q9GZU2 1588 aa51.32■■■■■ 5.81
ECI1-203ENST00000562238 BAZ1BQ9UIG0 1483 aaKnown RBP51.18■■■■■ 5.78
ECI1-203ENST00000562238 WIZO95785 1651 aa50.84■■■■■ 5.73
ECI1-203ENST00000562238 NESP48681 1621 aa50.73■■■■■ 5.71
ECI1-203ENST00000562238 ERCC6Q03468 1493 aa50.6■■■■■ 5.69
ECI1-203ENST00000562238 RSF1Q96T23 1441 aaPredicted RBP50.54■■■■■ 5.68
ECI1-203ENST00000562238 LAMC3Q9Y6N6 1575 aa50.43■■■■■ 5.66
ECI1-203ENST00000562238 CUX2O14529 1486 aa50.27■■■■■ 5.64
ECI1-203ENST00000562238 TOP2AP11388 1531 aaKnown RBP50.19■■■■■ 5.62
ECI1-203ENST00000562238 KIF21AQ7Z4S6 1674 aa50.17■■■■■ 5.62
ECI1-203ENST00000562238 CADPSQ9ULU8 1353 aa50.12■■■■■ 5.61
ECI1-203ENST00000562238 THOC2Q8NI27 1593 aaKnown RBP50.1■■■■■ 5.61
ECI1-203ENST00000562238 PDS5BQ9NTI5 1447 aa50.02■■■■■ 5.6
ECI1-203ENST00000562238 CFTRP13569 1480 aa49.75■■■■■ 5.55
ECI1-203ENST00000562238 MRC2Q9UBG0 1479 aa49.63■■■■■ 5.53
ECI1-203ENST00000562238 CCDC88BA6NC98 1476 aa49.6■■■■■ 5.53
ECI1-203ENST00000562238 FANCD2Q9BXW9 1451 aa49.59■■■■■ 5.53
ECI1-203ENST00000562238 CEP164Q9UPV0 1460 aa49.57■■■■■ 5.53
ECI1-203ENST00000562238 WDR62O43379 1518 aa49.52■■■■■ 5.52
ECI1-203ENST00000562238 PRDM2Q13029 1718 aa49.46■■■■■ 5.51
ECI1-203ENST00000562238 DNAJC5Q9H3Z4 198 aa49.36■■■■■ 5.49
ECI1-203ENST00000562238 URB2Q14146 1524 aaKnown RBP49.2■■■■■ 5.47
ECI1-203ENST00000562238 SUPT5HO00267 1087 aaKnown RBP48.79■■■■■ 5.4
ECI1-203ENST00000562238 TOPBP1Q92547 1522 aa48.77■■■■■ 5.4
ECI1-203ENST00000562238 DNMBPQ6XZF7 1577 aa48.67■■■■■ 5.38
ECI1-203ENST00000562238 ABCC8Q09428 1581 aa48.6■■■■■ 5.37
ECI1-203ENST00000562238 IFT140Q96RY7 1462 aa48.54■■■■■ 5.36
ECI1-203ENST00000562238 ZNF608Q9ULD9 1512 aaPredicted RBP48.48■■■■■ 5.35
ECI1-203ENST00000562238 TARBP1Q13395 1621 aaKnown RBP48.34■■■■■ 5.33
ECI1-203ENST00000562238 POLA1P09884 1462 aaPredicted RBP48.32■■■■■ 5.33
ECI1-203ENST00000562238 EIF4G3O43432 1585 aaKnown RBP48.27■■■■■ 5.32
ECI1-203ENST00000562238 CUX1P39880 1505 aa48.24■■■■■ 5.31
ECI1-203ENST00000562238 RAD54L2Q9Y4B4 1467 aa48.14■■■■■ 5.3
ECI1-203ENST00000562238 FGD5Q6ZNL6 1462 aa48.12■■■■■ 5.29
ECI1-203ENST00000562238 AQRO60306 1485 aaKnown RBP eCLIP48.08■■■■■ 5.298e-7■■■□□ 17.1
ECI1-203ENST00000562238 SOGA1O94964 1423 aa48.04■■■■■ 5.28
ECI1-203ENST00000562238 OSCARQ8IYS5 282 aa48.01■■■■■ 5.28
ECI1-203ENST00000562238 TDRD9Q8NDG6 1382 aaKnown RBP47.88■■■■■ 5.26
ECI1-203ENST00000562238 WDR97A6NE52 1622 aa47.85■■■■■ 5.25
ECI1-203ENST00000562238 CHD1O14646 1710 aa47.82■■■■■ 5.25
ECI1-203ENST00000562238 BIVM-ERCC5R4GMW8 1640 aa47.68■■■■■ 5.22
ECI1-203ENST00000562238 SYNJ1O43426 1573 aa47.67■■■■■ 5.22
ECI1-203ENST00000562238 TOP2BQ02880 1626 aa47.65■■■■■ 5.22
ECI1-203ENST00000562238 SNAPC4Q5SXM2 1469 aa47.63■■■■■ 5.22
ECI1-203ENST00000562238 WRNQ14191 1432 aaPredicted RBP eCLIP47.63■■■■■ 5.21
ECI1-203ENST00000562238 ABCA10Q8WWZ4 1543 aa47.6■■■■■ 5.21
ECI1-203ENST00000562238 PBRM1Q86U86 1689 aa47.57■■■■■ 5.21
ECI1-203ENST00000562238 GRIN2BQ13224 1484 aa47.56■■■■■ 5.2
ECI1-203ENST00000562238 ABCA5Q8WWZ7 1642 aa47.54■■■■■ 5.2
ECI1-203ENST00000562238 FBLN2P98095 1184 aa47.52■■■■■ 5.2
ECI1-203ENST00000562238 TRIM41Q8WV44 630 aa47.52■■■■■ 5.2
ECI1-203ENST00000562238 RIMBP3CA6NJZ7 1639 aa47.5■■■■■ 5.19
ECI1-203ENST00000562238 RIMBP3BA6NNM3 1639 aa47.5■■■■■ 5.19
ECI1-203ENST00000562238 RIMBP3Q9UFD9 1639 aa47.5■■■■■ 5.19
ECI1-203ENST00000562238 GAPVD1Q14C86 1478 aa47.5■■■■■ 5.19
ECI1-203ENST00000562238 MAGI1Q96QZ7 1491 aaPredicted RBP47.48■■■■■ 5.19
ECI1-203ENST00000562238 ARHGEF11O15085 1522 aa47.38■■■■■ 5.18
ECI1-203ENST00000562238 SYNJ2O15056 1496 aa47.33■■■■■ 5.17
ECI1-203ENST00000562238 CHMP7Q8WUX9 453 aaPredicted RBP47.27■■■■■ 5.16
ECI1-203ENST00000562238 CLASP1Q7Z460 1538 aa47.23■■■■■ 5.15
ECI1-203ENST00000562238 ADAMTS12P58397 1594 aa47.12■■■■■ 5.13
ECI1-203ENST00000562238 ERICH3Q5RHP9 1530 aa47■■■■■ 5.12
ECI1-203ENST00000562238 ARAP1Q96P48 1450 aa46.99■■■■■ 5.11
ECI1-203ENST00000562238 GRIN2AQ12879 1464 aa46.97■■■■■ 5.11
ECI1-203ENST00000562238 FHAD1B1AJZ9 1412 aa46.9■■■■■ 5.1
ECI1-203ENST00000562238 CYB5RLQ6IPT4 315 aa46.88■■■■■ 5.1
ECI1-203ENST00000562238 CEP170Q5SW79 1584 aa46.85■■■■■ 5.09
ECI1-203ENST00000562238 NUP160Q12769 1436 aa46.79■■■■■ 5.08
ECI1-203ENST00000562238 KIF27Q86VH2 1401 aa46.62■■■■■ 5.05
ECI1-203ENST00000562238 ERCC6L2Q5T890 1561 aa46.6■■■■■ 5.05
ECI1-203ENST00000562238 SHROOM2Q13796 1616 aa46.57■■■■■ 5.05
ECI1-203ENST00000562238 IGF1RP08069 1367 aa46.56■■■■■ 5.04
ECI1-203ENST00000562238 CUL7Q14999 1698 aa46.51■■■■■ 5.04
ECI1-203ENST00000562238 RUSC2Q8N2Y8 1516 aa46.44■■■■■ 5.03
ECI1-203ENST00000562238 PRG4Q92954 1404 aaPredicted RBP46.25■■■■■ 4.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms