Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SYVN1Q86TM6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.16■■□□□ 1.78
SYVN1Q86TM6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SYVN1Q86TM6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SYVN1Q86TM6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SYVN1Q86TM6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SYVN1Q86TM6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
SYVN1Q86TM6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SYVN1Q86TM6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.14■■□□□ 1.78
SYVN1Q86TM6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SYVN1Q86TM6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SYVN1Q86TM6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.14■■□□□ 1.77
SYVN1Q86TM6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.14■■□□□ 1.77
SYVN1Q86TM6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SYVN1Q86TM6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SYVN1Q86TM6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.12■■□□□ 1.77
SYVN1Q86TM6 AP006261.1-201ENST00000584783 668 ntBASIC26.11■■□□□ 1.77
SYVN1Q86TM6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
SYVN1Q86TM6 ABCB10P3-201ENST00000561950 2166 ntBASIC26.11■■□□□ 1.77
SYVN1Q86TM6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
SYVN1Q86TM6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
SYVN1Q86TM6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SYVN1Q86TM6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SYVN1Q86TM6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SYVN1Q86TM6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
SYVN1Q86TM6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SYVN1Q86TM6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SYVN1Q86TM6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SYVN1Q86TM6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SYVN1Q86TM6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.07■■□□□ 1.76
SYVN1Q86TM6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SYVN1Q86TM6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SYVN1Q86TM6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SYVN1Q86TM6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
SYVN1Q86TM6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SYVN1Q86TM6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SYVN1Q86TM6 AL162393.1-201ENST00000437852 946 ntBASIC26.05■■□□□ 1.76
SYVN1Q86TM6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SYVN1Q86TM6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SYVN1Q86TM6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.04■■□□□ 1.76
SYVN1Q86TM6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SYVN1Q86TM6 ST7-AS1-201ENST00000456775 1889 ntBASIC26.04■■□□□ 1.76
SYVN1Q86TM6 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.03■■□□□ 1.76
SYVN1Q86TM6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SYVN1Q86TM6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SYVN1Q86TM6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SYVN1Q86TM6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SYVN1Q86TM6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SYVN1Q86TM6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SYVN1Q86TM6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SYVN1Q86TM6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SYVN1Q86TM6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SYVN1Q86TM6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SYVN1Q86TM6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.99■■□□□ 1.75
SYVN1Q86TM6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SYVN1Q86TM6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SYVN1Q86TM6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.98■■□□□ 1.75
SYVN1Q86TM6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SYVN1Q86TM6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SYVN1Q86TM6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
SYVN1Q86TM6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SYVN1Q86TM6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
SYVN1Q86TM6 AC139426.1-201ENST00000568218 2529 ntBASIC25.96■■□□□ 1.75
SYVN1Q86TM6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SYVN1Q86TM6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
SYVN1Q86TM6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
SYVN1Q86TM6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.94■■□□□ 1.74
SYVN1Q86TM6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SYVN1Q86TM6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.94■■□□□ 1.74
SYVN1Q86TM6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SYVN1Q86TM6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SYVN1Q86TM6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SYVN1Q86TM6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SYVN1Q86TM6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SYVN1Q86TM6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SYVN1Q86TM6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SYVN1Q86TM6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.91■■□□□ 1.74
SYVN1Q86TM6 WASH5P-204ENST00000632292 975 ntBASIC25.91■■□□□ 1.74
SYVN1Q86TM6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SYVN1Q86TM6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SYVN1Q86TM6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SYVN1Q86TM6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SYVN1Q86TM6 MIR3665-201ENST00000578708 105 ntBASIC25.9■■□□□ 1.74
SYVN1Q86TM6 AL135925.1-201ENST00000605920 1701 ntBASIC25.89■■□□□ 1.74
SYVN1Q86TM6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SYVN1Q86TM6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.88■■□□□ 1.73
SYVN1Q86TM6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SYVN1Q86TM6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SYVN1Q86TM6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SYVN1Q86TM6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.87■■□□□ 1.73
SYVN1Q86TM6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SYVN1Q86TM6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SYVN1Q86TM6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.86■■□□□ 1.73
SYVN1Q86TM6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
SYVN1Q86TM6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.85■■□□□ 1.73
SYVN1Q86TM6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SYVN1Q86TM6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.85■■□□□ 1.73
SYVN1Q86TM6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.84■■□□□ 1.73
SYVN1Q86TM6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.83■■□□□ 1.72
SYVN1Q86TM6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms