Protein–RNA interactions for Protein: P59037

LINC00313, Putative uncharacterized protein encoded by LINC00313, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313P59037 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
LINC00313P59037 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LINC00313P59037 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LINC00313P59037 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC15.04■□□□□ -0
LINC00313P59037 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LINC00313P59037 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00313P59037 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LINC00313P59037 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00313P59037 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00313P59037 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00313P59037 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LINC00313P59037 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00313P59037 EBPL-203ENST00000378270 579 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00313P59037 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00313P59037 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00313P59037 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00313P59037 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00313P59037 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00313P59037 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00313P59037 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
LINC00313P59037 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC14.99□□□□□ -0.01
LINC00313P59037 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC00313P59037 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LINC00313P59037 SHF-206ENST00000560471 2499 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC00313P59037 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00313P59037 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00313P59037 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC00313P59037 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC00313P59037 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00313P59037 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00313P59037 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00313P59037 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC00313P59037 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00313P59037 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC00313P59037 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
LINC00313P59037 ST7-AS1-201ENST00000456775 1889 ntBASIC14.96□□□□□ -0.01
LINC00313P59037 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC00313P59037 DYNLL1-208ENST00000550178 581 ntBASIC14.96□□□□□ -0.01
LINC00313P59037 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00313P59037 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00313P59037 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC00313P59037 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LINC00313P59037 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC00313P59037 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00313P59037 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00313P59037 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00313P59037 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00313P59037 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LINC00313P59037 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00313P59037 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00313P59037 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LINC00313P59037 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LINC00313P59037 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LINC00313P59037 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00313P59037 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00313P59037 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00313P59037 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00313P59037 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00313P59037 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00313P59037 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC00313P59037 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00313P59037 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00313P59037 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00313P59037 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00313P59037 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00313P59037 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LINC00313P59037 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00313P59037 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00313P59037 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LINC00313P59037 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00313P59037 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00313P59037 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00313P59037 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00313P59037 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00313P59037 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00313P59037 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LINC00313P59037 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00313P59037 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00313P59037 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00313P59037 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00313P59037 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00313P59037 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00313P59037 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LINC00313P59037 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINC00313P59037 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00313P59037 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00313P59037 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
LINC00313P59037 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00313P59037 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00313P59037 AL031258.1-201ENST00000623562 325 ntBASIC14.85□□□□□ -0.03
LINC00313P59037 AL135925.1-201ENST00000605920 1701 ntBASIC14.85□□□□□ -0.03
LINC00313P59037 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LINC00313P59037 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00313P59037 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00313P59037 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00313P59037 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00313P59037 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00313P59037 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00313P59037 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00313P59037 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms