RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 DCAF8L2P0C7V8 631 aa37.39■■■■□ 3.58
TOP2B-204ENST00000435706 SUPT5HO00267 1087 aaKnown RBP36.67■■■■□ 3.46
TOP2B-204ENST00000435706 NISCHQ9Y2I1 1504 aa36.07■■■■□ 3.37
TOP2B-204ENST00000435706 PELP1Q8IZL8 1130 aaKnown RBP35.85■■■■□ 3.33
TOP2B-204ENST00000435706 SHROOM4Q9ULL8 1493 aa35.77■■■■□ 3.32
TOP2B-204ENST00000435706 EHMT2Q96KQ7 1210 aa35.38■■■■□ 3.25
TOP2B-204ENST00000435706 PCGF6Q9BYE7 350 aa35.3■■■■□ 3.24
TOP2B-204ENST00000435706 CENPBP07199 599 aaPredicted RBP34.87■■■■□ 3.17
TOP2B-204ENST00000435706 ZEB1P37275 1124 aaPredicted RBP34.76■■■■□ 3.16
TOP2B-204ENST00000435706 MYT1Q01538 1121 aa34.72■■■■□ 3.15
TOP2B-204ENST00000435706 APLP2Q06481 763 aa34.63■■■■□ 3.13
TOP2B-204ENST00000435706 FAM9AQ8IZU1 332 aaPredicted RBP34.55■■■■□ 3.12
TOP2B-204ENST00000435706 ERICH6Q7L0X2 663 aa34.4■■■■□ 3.1
TOP2B-204ENST00000435706 TTBK1Q5TCY1 1321 aaPredicted RBP34.39■■■■□ 3.1
TOP2B-204ENST00000435706 CCER1Q8TC90 406 aaPredicted RBP34.3■■■■□ 3.08
TOP2B-204ENST00000435706 HRCP23327 699 aa34.03■■■■□ 3.04
TOP2B-204ENST00000435706 YTHDC1Q96MU7 727 aaKnown RBP33.94■■■■□ 3.02
TOP2B-204ENST00000435706 TRIM41Q8WV44 630 aa33.88■■■■□ 3.01
TOP2B-204ENST00000435706 NEFLP07196 543 aa33.73■■■□□ 2.99
TOP2B-204ENST00000435706 TRIM26Q12899 539 aaPredicted RBP33.69■■■□□ 2.98
TOP2B-204ENST00000435706 RANGAP1P46060 587 aaPredicted RBP33.51■■■□□ 2.95
TOP2B-204ENST00000435706 PPARGC1BQ86YN6 1023 aaKnown RBP33.33■■■□□ 2.93
TOP2B-204ENST00000435706 UBTFP17480 764 aaKnown RBP33.33■■■□□ 2.93
TOP2B-204ENST00000435706 ATP1B4Q9UN42 357 aaPredicted RBP33.03■■■□□ 2.88
TOP2B-204ENST00000435706 LOC105371045A0A1W2PR82 267 aa32.98■■■□□ 2.87
TOP2B-204ENST00000435706 CHIC1Q5VXU3 224 aa32.96■■■□□ 2.87
TOP2B-204ENST00000435706 DIEXFQ68CQ4 756 aaKnown RBP32.76■■■□□ 2.83
TOP2B-204ENST00000435706 DAXXQ9UER7 740 aaPredicted RBP32.6■■■□□ 2.81
TOP2B-204ENST00000435706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.57■■■□□ 2.81
TOP2B-204ENST00000435706 GTF3C3Q9Y5Q9 886 aa32.54■■■□□ 2.8
TOP2B-204ENST00000435706 HNRNPUL2Q1KMD3 747 aaKnown RBP32.53■■■□□ 2.8
TOP2B-204ENST00000435706 ITGAEP38570 1179 aa32.42■■■□□ 2.78
TOP2B-204ENST00000435706 RTL5Q5HYW3 569 aaPredicted RBP32.33■■■□□ 2.77
TOP2B-204ENST00000435706 POLR3GLQ9BT43 218 aa32.19■■■□□ 2.74
TOP2B-204ENST00000435706 ACIN1Q9UKV3 1341 aaKnown RBP32.13■■■□□ 2.73
TOP2B-204ENST00000435706 BCANQ96GW7 911 aa32.06■■■□□ 2.72
TOP2B-204ENST00000435706 CNGB1Q14028 1251 aaPredicted RBP31.99■■■□□ 2.71
TOP2B-204ENST00000435706 ZNF316A6NFI3 1004 aaPredicted RBP31.94■■■□□ 2.7
TOP2B-204ENST00000435706 CDK11AQ9UQ88 783 aaPredicted RBP31.8■■■□□ 2.68
TOP2B-204ENST00000435706 CLSPNQ9HAW4 1339 aa31.7■■■□□ 2.66
TOP2B-204ENST00000435706 ANP32CO43423 234 aa31.62■■■□□ 2.65
TOP2B-204ENST00000435706 NEUROD1Q13562 356 aa31.56■■■□□ 2.64
TOP2B-204ENST00000435706 FAM50AQ14320 339 aaKnown RBP31.51■■■□□ 2.63
TOP2B-204ENST00000435706 SCAF1Q9H7N4 1312 aaKnown RBP31.37■■■□□ 2.61
TOP2B-204ENST00000435706 TRIM52Q96A61 297 aa31.28■■■□□ 2.6
TOP2B-204ENST00000435706 ANP32AP39687 249 aaKnown RBP31.26■■■□□ 2.6
TOP2B-204ENST00000435706 MYT1LQ9UL68 1186 aa31.26■■■□□ 2.6
TOP2B-204ENST00000435706 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
TOP2B-204ENST00000435706 FKBP8Q14318 412 aa31.2■■■□□ 2.58
TOP2B-204ENST00000435706 SLC4A1APQ9BWU0 796 aaKnown RBP31.17■■■□□ 2.58
TOP2B-204ENST00000435706 EIF5BO60841 1220 aaKnown RBP31.01■■■□□ 2.55
TOP2B-204ENST00000435706 NPM2Q86SE8 214 aaKnown RBP30.99■■■□□ 2.55
TOP2B-204ENST00000435706 ZNF326Q5BKZ1 582 aaKnown RBP30.98■■■□□ 2.55
TOP2B-204ENST00000435706 CSRNP3Q8WYN3 585 aa30.81■■■□□ 2.52
TOP2B-204ENST00000435706 CANXP27824 592 aaKnown RBP30.79■■■□□ 2.52
TOP2B-204ENST00000435706 HNRNPUQ00839 825 aaKnown RBP eCLIP30.77■■■□□ 2.52
TOP2B-204ENST00000435706 MIER1Q8N108 512 aa30.74■■■□□ 2.51
TOP2B-204ENST00000435706 ZBTB47Q9UFB7 747 aaPredicted RBP30.73■■■□□ 2.51
TOP2B-204ENST00000435706 NBR1Q14596 966 aa30.72■■■□□ 2.51
TOP2B-204ENST00000435706 DDX10Q13206 875 aaKnown RBP30.7■■■□□ 2.51
TOP2B-204ENST00000435706 GLIPR1L2Q4G1C9 344 aa30.63■■■□□ 2.49
TOP2B-204ENST00000435706 ANP32EQ9BTT0 268 aa30.57■■■□□ 2.48
TOP2B-204ENST00000435706 TONSLQ96HA7 1378 aa30.54■■■□□ 2.48
TOP2B-204ENST00000435706 FAM9BQ8IZU0 186 aa30.54■■■□□ 2.48
TOP2B-204ENST00000435706 CCDC136Q96JN2 1154 aa30.5■■■□□ 2.47
TOP2B-204ENST00000435706 ANP32BQ92688 251 aaKnown RBP30.49■■■□□ 2.47
TOP2B-204ENST00000435706 BCL11AQ9H165 835 aa30.47■■■□□ 2.47
TOP2B-204ENST00000435706 P3H3Q8IVL6 736 aa30.42■■■□□ 2.46
TOP2B-204ENST00000435706 MYO15BQ96JP2 1530 aa30.39■■■□□ 2.46
TOP2B-204ENST00000435706 IRX6P78412 446 aaPredicted RBP30.36■■■□□ 2.45
TOP2B-204ENST00000435706 UPF2Q9HAU5 1272 aaKnown RBP30.36■■■□□ 2.45
TOP2B-204ENST00000435706 PABPN1Q86U42 306 aaKnown RBP eCLIP30.36■■■□□ 2.45
TOP2B-204ENST00000435706 HSP90AA1P07900 732 aaKnown RBP30.3■■■□□ 2.44
TOP2B-204ENST00000435706 CCDC180Q9P1Z9 1646 aa30.24■■■□□ 2.43
TOP2B-204ENST00000435706 NEFMP07197 916 aa30.24■■■□□ 2.43
TOP2B-204ENST00000435706 MRS2Q9HD23 443 aa30.22■■■□□ 2.43
TOP2B-204ENST00000435706 SALL2Q9Y467 1007 aaPredicted RBP30.21■■■□□ 2.43
TOP2B-204ENST00000435706 TMC1Q8TDI8 760 aa30.17■■■□□ 2.42
TOP2B-204ENST00000435706 ABCC9O60706 1549 aa30.17■■■□□ 2.42
TOP2B-204ENST00000435706 ARXQ96QS3 562 aa30.17■■■□□ 2.42
TOP2B-204ENST00000435706 ARID3CA6NKF2 412 aa30.14■■■□□ 2.42
TOP2B-204ENST00000435706 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.08■■■□□ 2.41
TOP2B-204ENST00000435706 HIRIP3Q9BW71 556 aaPredicted RBP30.07■■■□□ 2.4
TOP2B-204ENST00000435706 ZNF777Q9ULD5 760 aaPredicted RBP30.05■■■□□ 2.4
TOP2B-204ENST00000435706 SUPT16HQ9Y5B9 1047 aaKnown RBP30.03■■■□□ 2.4
TOP2B-204ENST00000435706 SLC24A1O60721 1099 aa30.01■■■□□ 2.39
TOP2B-204ENST00000435706 DDRGK1Q96HY6 314 aa30.01■■■□□ 2.39
TOP2B-204ENST00000435706 ZCCHC6Q5VYS8 1495 aaKnown RBP30■■■□□ 2.39
TOP2B-204ENST00000435706 CLIP1P30622 1438 aa29.86■■■□□ 2.37
TOP2B-204ENST00000435706 FBLN2P98095 1184 aa29.86■■■□□ 2.37
TOP2B-204ENST00000435706 EIF4G2P78344 907 aaKnown RBP eCLIP29.85■■■□□ 2.37
TOP2B-204ENST00000435706 WDR43Q15061 677 aaKnown RBP eCLIP29.85■■■□□ 2.37
TOP2B-204ENST00000435706 CHIC2Q9UKJ5 165 aa29.85■■■□□ 2.37
TOP2B-204ENST00000435706 PPM1GO15355 546 aaPredicted RBP29.82■■■□□ 2.36
TOP2B-204ENST00000435706 BECN1Q14457 450 aa29.81■■■□□ 2.36
TOP2B-204ENST00000435706 NOP58Q9Y2X3 529 aaKnown RBP29.8■■■□□ 2.36
TOP2B-204ENST00000435706 CEP162Q5TB80 1403 aa29.79■■■□□ 2.36
TOP2B-204ENST00000435706 RTN4Q9NQC3 1192 aaKnown RBP29.78■■■□□ 2.36
TOP2B-204ENST00000435706 PPP4R2Q9NY27 417 aa29.77■■■□□ 2.36
TOP2B-204ENST00000435706 TRIM44Q96DX7 344 aaPredicted RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms