RNA–Protein interactions for RNA: ENST00000437941.6

SSX2IP-203, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2 BASIC

Gene SSX2IP, Length 5,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-203ENST00000437941 DCAF8L2P0C7V8 631 aa39.1■■■■□ 3.85
SSX2IP-203ENST00000437941 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
SSX2IP-203ENST00000437941 SUPT5HO00267 1087 aaKnown RBP36.53■■■■□ 3.44
SSX2IP-203ENST00000437941 SHROOM4Q9ULL8 1493 aa35.88■■■■□ 3.33
SSX2IP-203ENST00000437941 EHMT2Q96KQ7 1210 aa35.44■■■■□ 3.26
SSX2IP-203ENST00000437941 APLP2Q06481 763 aa35.14■■■■□ 3.22
SSX2IP-203ENST00000437941 FAM9AQ8IZU1 332 aaPredicted RBP35.07■■■■□ 3.2
SSX2IP-203ENST00000437941 PELP1Q8IZL8 1130 aaKnown RBP34.45■■■■□ 3.11
SSX2IP-203ENST00000437941 TTBK1Q5TCY1 1321 aaPredicted RBP34.18■■■■□ 3.06
SSX2IP-203ENST00000437941 RANGAP1P46060 587 aaPredicted RBP34.12■■■■□ 3.05
SSX2IP-203ENST00000437941 ATP1B4Q9UN42 357 aaPredicted RBP34.02■■■■□ 3.04
SSX2IP-203ENST00000437941 TRIM41Q8WV44 630 aa33.93■■■■□ 3.02
SSX2IP-203ENST00000437941 PCGF6Q9BYE7 350 aa33.7■■■□□ 2.99
SSX2IP-203ENST00000437941 UBTFP17480 764 aaKnown RBP33.69■■■□□ 2.98
SSX2IP-203ENST00000437941 CCER1Q8TC90 406 aaPredicted RBP33.38■■■□□ 2.93
SSX2IP-203ENST00000437941 ZEB1P37275 1124 aaPredicted RBP33.25■■■□□ 2.91
SSX2IP-203ENST00000437941 CENPBP07199 599 aaPredicted RBP33.08■■■□□ 2.89
SSX2IP-203ENST00000437941 MYT1LQ9UL68 1186 aa33.03■■■□□ 2.88
SSX2IP-203ENST00000437941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.97■■■□□ 2.87
SSX2IP-203ENST00000437941 HNRNPUL2Q1KMD3 747 aaKnown RBP32.97■■■□□ 2.87
SSX2IP-203ENST00000437941 ERICH6Q7L0X2 663 aa32.93■■■□□ 2.86
SSX2IP-203ENST00000437941 NEFLP07196 543 aa32.7■■■□□ 2.82
SSX2IP-203ENST00000437941 PPARGC1BQ86YN6 1023 aaKnown RBP32.67■■■□□ 2.82
SSX2IP-203ENST00000437941 ITGAEP38570 1179 aa32.55■■■□□ 2.8
SSX2IP-203ENST00000437941 YTHDC1Q96MU7 727 aaKnown RBP32.39■■■□□ 2.78
SSX2IP-203ENST00000437941 POLR3GLQ9BT43 218 aa32.38■■■□□ 2.77
SSX2IP-203ENST00000437941 TRIM26Q12899 539 aaPredicted RBP32.27■■■□□ 2.76
SSX2IP-203ENST00000437941 CHIC1Q5VXU3 224 aa32.25■■■□□ 2.75
SSX2IP-203ENST00000437941 ABCC9O60706 1549 aa32.19■■■□□ 2.74
SSX2IP-203ENST00000437941 PABPN1Q86U42 306 aaKnown RBP eCLIP32.19■■■□□ 2.74
SSX2IP-203ENST00000437941 SLC4A1APQ9BWU0 796 aaKnown RBP32.02■■■□□ 2.72
SSX2IP-203ENST00000437941 LOC105371045A0A1W2PR82 267 aa31.97■■■□□ 2.71
SSX2IP-203ENST00000437941 CNGB1Q14028 1251 aaPredicted RBP31.91■■■□□ 2.7
SSX2IP-203ENST00000437941 DAXXQ9UER7 740 aaPredicted RBP31.85■■■□□ 2.69
SSX2IP-203ENST00000437941 FAM50AQ14320 339 aaKnown RBP31.79■■■□□ 2.68
SSX2IP-203ENST00000437941 FBLN2P98095 1184 aa31.75■■■□□ 2.67
SSX2IP-203ENST00000437941 TRIM52Q96A61 297 aa31.7■■■□□ 2.67
SSX2IP-203ENST00000437941 HRCP23327 699 aa31.62■■■□□ 2.65
SSX2IP-203ENST00000437941 NEUROD1Q13562 356 aa31.32■■■□□ 2.6
SSX2IP-203ENST00000437941 CLSPNQ9HAW4 1339 aa31.31■■■□□ 2.6
SSX2IP-203ENST00000437941 ZNF326Q5BKZ1 582 aaKnown RBP31.28■■■□□ 2.6
SSX2IP-203ENST00000437941 BCANQ96GW7 911 aa31.21■■■□□ 2.59
SSX2IP-203ENST00000437941 ARID3CA6NKF2 412 aa31.1■■■□□ 2.57
SSX2IP-203ENST00000437941 P3H3Q8IVL6 736 aa31.09■■■□□ 2.57
SSX2IP-203ENST00000437941 DIEXFQ68CQ4 756 aaKnown RBP31.05■■■□□ 2.56
SSX2IP-203ENST00000437941 ZNF316A6NFI3 1004 aaPredicted RBP31.04■■■□□ 2.56
SSX2IP-203ENST00000437941 CDK11AQ9UQ88 783 aaPredicted RBP31.02■■■□□ 2.56
SSX2IP-203ENST00000437941 ESF1Q9H501 851 aaKnown RBP31.01■■■□□ 2.55
SSX2IP-203ENST00000437941 ZNF777Q9ULD5 760 aaPredicted RBP30.98■■■□□ 2.55
SSX2IP-203ENST00000437941 ZBTB47Q9UFB7 747 aaPredicted RBP30.98■■■□□ 2.55
SSX2IP-203ENST00000437941 MYT1Q01538 1121 aa30.97■■■□□ 2.55
SSX2IP-203ENST00000437941 SLC24A1O60721 1099 aa30.95■■■□□ 2.55
SSX2IP-203ENST00000437941 NEFMP07197 916 aa30.93■■■□□ 2.54
SSX2IP-203ENST00000437941 ANP32CO43423 234 aa30.91■■■□□ 2.54
SSX2IP-203ENST00000437941 CSRNP3Q8WYN3 585 aa30.91■■■□□ 2.54
SSX2IP-203ENST00000437941 NPM1P06748 294 aaKnown RBP eCLIP30.88■■■□□ 2.53
SSX2IP-203ENST00000437941 RTL5Q5HYW3 569 aaPredicted RBP30.75■■■□□ 2.51
SSX2IP-203ENST00000437941 SCRIBQ14160 1630 aa30.72■■■□□ 2.51
SSX2IP-203ENST00000437941 STAG3Q9UJ98 1225 aa30.72■■■□□ 2.51
SSX2IP-203ENST00000437941 CANXP27824 592 aaKnown RBP30.71■■■□□ 2.51
SSX2IP-203ENST00000437941 CHGAP10645 457 aaKnown RBP30.62■■■□□ 2.49
SSX2IP-203ENST00000437941 PLPPR3Q6T4P5 718 aa30.6■■■□□ 2.49
SSX2IP-203ENST00000437941 BCL11AQ9H165 835 aa30.54■■■□□ 2.48
SSX2IP-203ENST00000437941 CHMP7Q8WUX9 453 aaPredicted RBP30.34■■■□□ 2.45
SSX2IP-203ENST00000437941 TONSLQ96HA7 1378 aa30.29■■■□□ 2.44
SSX2IP-203ENST00000437941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.28■■■□□ 2.445e-7■□□□□ 9.3
SSX2IP-203ENST00000437941 TSPY4P0CV99 314 aa30.24■■■□□ 2.43
SSX2IP-203ENST00000437941 TSPY10P0CW01 314 aa30.24■■■□□ 2.43
SSX2IP-203ENST00000437941 CHIC2Q9UKJ5 165 aa30.17■■■□□ 2.42
SSX2IP-203ENST00000437941 ZCCHC6Q5VYS8 1495 aaKnown RBP30.13■■■□□ 2.41
SSX2IP-203ENST00000437941 MTUS2Q5JR59 1369 aa30.06■■■□□ 2.4
SSX2IP-203ENST00000437941 GTF3C3Q9Y5Q9 886 aa30.04■■■□□ 2.4
SSX2IP-203ENST00000437941 SCAF1Q9H7N4 1312 aaKnown RBP29.99■■■□□ 2.39
SSX2IP-203ENST00000437941 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
SSX2IP-203ENST00000437941 KCNH8Q96L42 1107 aa29.93■■■□□ 2.38
SSX2IP-203ENST00000437941 KDM2AQ9Y2K7 1162 aa29.92■■■□□ 2.38
SSX2IP-203ENST00000437941 ANP32AP39687 249 aaKnown RBP29.88■■■□□ 2.37
SSX2IP-203ENST00000437941 PPP1R15AO75807 674 aaPredicted RBP29.88■■■□□ 2.37
SSX2IP-203ENST00000437941 PLEKHD1A6NEE1 506 aa29.87■■■□□ 2.37
SSX2IP-203ENST00000437941 FAM9BQ8IZU0 186 aa29.84■■■□□ 2.37
SSX2IP-203ENST00000437941 CCDC180Q9P1Z9 1646 aa29.83■■■□□ 2.37
SSX2IP-203ENST00000437941 TMC1Q8TDI8 760 aa29.83■■■□□ 2.37
SSX2IP-203ENST00000437941 WDR43Q15061 677 aaKnown RBP eCLIP29.82■■■□□ 2.36
SSX2IP-203ENST00000437941 DDX10Q13206 875 aaKnown RBP29.81■■■□□ 2.36
SSX2IP-203ENST00000437941 HNRNPUQ00839 825 aaKnown RBP eCLIP29.8■■■□□ 2.36
SSX2IP-203ENST00000437941 A0A0G2JS52 829 aa29.8■■■□□ 2.36
SSX2IP-203ENST00000437941 SALL2Q9Y467 1007 aaPredicted RBP29.79■■■□□ 2.36
SSX2IP-203ENST00000437941 C14orf37Q86TY3 774 aa29.78■■■□□ 2.36
SSX2IP-203ENST00000437941 HSP90AA1P07900 732 aaKnown RBP29.77■■■□□ 2.36
SSX2IP-203ENST00000437941 NPM2Q86SE8 214 aaKnown RBP29.76■■■□□ 2.36
SSX2IP-203ENST00000437941 UPF2Q9HAU5 1272 aaKnown RBP29.76■■■□□ 2.35
SSX2IP-203ENST00000437941 ARID4BQ4LE39 1312 aaPredicted RBP29.75■■■□□ 2.35
SSX2IP-203ENST00000437941 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.72■■■□□ 2.35
SSX2IP-203ENST00000437941 RSF1Q96T23 1441 aaPredicted RBP29.7■■■□□ 2.35
SSX2IP-203ENST00000437941 CLIP1P30622 1438 aa29.7■■■□□ 2.35
SSX2IP-203ENST00000437941 ZBTB7CA1YPR0 619 aa29.7■■■□□ 2.34
SSX2IP-203ENST00000437941 RRP7BPQ9NSQ0 103 aa29.67■■■□□ 2.34
SSX2IP-203ENST00000437941 SENP3Q9H4L4 574 aaPredicted RBP29.65■■■□□ 2.34
SSX2IP-203ENST00000437941 PLEKHG5O94827 1062 aa29.64■■■□□ 2.33
SSX2IP-203ENST00000437941 ERCC6Q03468 1493 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms