Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPK2O00526 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
UPK2O00526 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK2O00526 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.41■■□□□ 1.02
UPK2O00526 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK2O00526 WASH5P-204ENST00000632292 975 ntBASIC21.4■■□□□ 1.02
UPK2O00526 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UPK2O00526 AL135925.1-201ENST00000605920 1701 ntBASIC21.39■■□□□ 1.01
UPK2O00526 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPK2O00526 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
UPK2O00526 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPK2O00526 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.38■■□□□ 1.01
UPK2O00526 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
UPK2O00526 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPK2O00526 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.37■■□□□ 1.01
UPK2O00526 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPK2O00526 AL133380.1-201ENST00000506013 324 ntBASIC21.36■■□□□ 1.01
UPK2O00526 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPK2O00526 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
UPK2O00526 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UPK2O00526 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UPK2O00526 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
UPK2O00526 AC139426.1-201ENST00000568218 2529 ntBASIC21.33■■□□□ 1
UPK2O00526 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.32■■□□□ 1
UPK2O00526 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.31■■□□□ 1
UPK2O00526 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
UPK2O00526 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.31■■□□□ 1
UPK2O00526 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.31■■□□□ 1
UPK2O00526 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UPK2O00526 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.3■■□□□ 1
UPK2O00526 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.3■■□□□ 1
UPK2O00526 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.29■■□□□ 1
UPK2O00526 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UPK2O00526 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.28■■□□□ 1
UPK2O00526 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UPK2O00526 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.27■■□□□ 1
UPK2O00526 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
UPK2O00526 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
UPK2O00526 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
UPK2O00526 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UPK2O00526 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UPK2O00526 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UPK2O00526 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UPK2O00526 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UPK2O00526 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UPK2O00526 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UPK2O00526 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UPK2O00526 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UPK2O00526 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
UPK2O00526 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.24■□□□□ 0.99
UPK2O00526 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.24■□□□□ 0.99
UPK2O00526 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UPK2O00526 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UPK2O00526 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.21■□□□□ 0.99
UPK2O00526 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
UPK2O00526 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPK2O00526 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPK2O00526 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
UPK2O00526 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.19■□□□□ 0.98
UPK2O00526 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.19■□□□□ 0.98
UPK2O00526 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
UPK2O00526 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
UPK2O00526 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
UPK2O00526 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPK2O00526 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UPK2O00526 RARRES2P7-201ENST00000567349 469 ntBASIC21.17■□□□□ 0.98
UPK2O00526 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UPK2O00526 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPK2O00526 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UPK2O00526 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UPK2O00526 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
UPK2O00526 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UPK2O00526 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UPK2O00526 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.14■□□□□ 0.97
UPK2O00526 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UPK2O00526 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UPK2O00526 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.13■□□□□ 0.97
UPK2O00526 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPK2O00526 SETD8P1-201ENST00000623146 1180 ntBASIC21.12■□□□□ 0.97
UPK2O00526 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
UPK2O00526 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
UPK2O00526 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
UPK2O00526 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
UPK2O00526 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
UPK2O00526 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPK2O00526 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
UPK2O00526 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
UPK2O00526 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UPK2O00526 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPK2O00526 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPK2O00526 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UPK2O00526 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.08■□□□□ 0.97
UPK2O00526 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UPK2O00526 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.07■□□□□ 0.96
UPK2O00526 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.07■□□□□ 0.96
UPK2O00526 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
UPK2O00526 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
UPK2O00526 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPK2O00526 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPK2O00526 AC010864.1-201ENST00000609407 1511 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms