Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MUC4Q99102 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
MUC4Q99102 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MUC4Q99102 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.84■□□□□ 0.77
MUC4Q99102 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MUC4Q99102 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.83■□□□□ 0.76
MUC4Q99102 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MUC4Q99102 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.81■□□□□ 0.76
MUC4Q99102 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MUC4Q99102 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MUC4Q99102 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MUC4Q99102 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MUC4Q99102 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MUC4Q99102 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MUC4Q99102 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
MUC4Q99102 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MUC4Q99102 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.75■□□□□ 0.75
MUC4Q99102 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MUC4Q99102 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MUC4Q99102 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MUC4Q99102 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MUC4Q99102 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MUC4Q99102 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MUC4Q99102 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MUC4Q99102 AL031258.1-201ENST00000623562 325 ntBASIC19.72■□□□□ 0.75
MUC4Q99102 ABCB10P3-201ENST00000561950 2166 ntBASIC19.72■□□□□ 0.75
MUC4Q99102 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MUC4Q99102 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.7■□□□□ 0.74
MUC4Q99102 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MUC4Q99102 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MUC4Q99102 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MUC4Q99102 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.68■□□□□ 0.74
MUC4Q99102 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.68■□□□□ 0.74
MUC4Q99102 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MUC4Q99102 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.67■□□□□ 0.74
MUC4Q99102 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MUC4Q99102 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MUC4Q99102 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MUC4Q99102 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MUC4Q99102 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MUC4Q99102 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MUC4Q99102 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.64■□□□□ 0.74
MUC4Q99102 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MUC4Q99102 AC139426.1-201ENST00000568218 2529 ntBASIC19.64■□□□□ 0.73
MUC4Q99102 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MUC4Q99102 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MUC4Q99102 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MUC4Q99102 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MUC4Q99102 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.62■□□□□ 0.73
MUC4Q99102 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MUC4Q99102 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.61■□□□□ 0.73
MUC4Q99102 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.61■□□□□ 0.73
MUC4Q99102 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MUC4Q99102 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
MUC4Q99102 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.6■□□□□ 0.73
MUC4Q99102 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MUC4Q99102 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
MUC4Q99102 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MUC4Q99102 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
MUC4Q99102 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MUC4Q99102 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MUC4Q99102 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MUC4Q99102 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MUC4Q99102 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
MUC4Q99102 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.56■□□□□ 0.72
MUC4Q99102 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MUC4Q99102 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MUC4Q99102 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.55■□□□□ 0.72
MUC4Q99102 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MUC4Q99102 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.54■□□□□ 0.72
MUC4Q99102 AL161658.1-201ENST00000623641 1967 ntBASIC19.53■□□□□ 0.72
MUC4Q99102 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
MUC4Q99102 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MUC4Q99102 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MUC4Q99102 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MUC4Q99102 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MUC4Q99102 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MUC4Q99102 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
MUC4Q99102 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
MUC4Q99102 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.52■□□□□ 0.71
MUC4Q99102 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MUC4Q99102 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.51■□□□□ 0.71
MUC4Q99102 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.5■□□□□ 0.71
MUC4Q99102 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.5■□□□□ 0.71
MUC4Q99102 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MUC4Q99102 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.49■□□□□ 0.71
MUC4Q99102 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.49■□□□□ 0.71
MUC4Q99102 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MUC4Q99102 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MUC4Q99102 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MUC4Q99102 ST7-AS1-201ENST00000456775 1889 ntBASIC19.48■□□□□ 0.71
MUC4Q99102 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MUC4Q99102 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
MUC4Q99102 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MUC4Q99102 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MUC4Q99102 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MUC4Q99102 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
MUC4Q99102 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MUC4Q99102 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.47■□□□□ 0.71
MUC4Q99102 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms