Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.62■■□□□ 1.85
EFCAB3Q8N7B9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
EFCAB3Q8N7B9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
EFCAB3Q8N7B9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
EFCAB3Q8N7B9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
EFCAB3Q8N7B9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
EFCAB3Q8N7B9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
EFCAB3Q8N7B9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.59■■□□□ 1.85
EFCAB3Q8N7B9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.59■■□□□ 1.85
EFCAB3Q8N7B9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
EFCAB3Q8N7B9 ABCB10P3-201ENST00000561950 2166 ntBASIC26.58■■□□□ 1.85
EFCAB3Q8N7B9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
EFCAB3Q8N7B9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
EFCAB3Q8N7B9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
EFCAB3Q8N7B9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
EFCAB3Q8N7B9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
EFCAB3Q8N7B9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
EFCAB3Q8N7B9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
EFCAB3Q8N7B9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
EFCAB3Q8N7B9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
EFCAB3Q8N7B9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
EFCAB3Q8N7B9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
EFCAB3Q8N7B9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
EFCAB3Q8N7B9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.51■■□□□ 1.83
EFCAB3Q8N7B9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.51■■□□□ 1.83
EFCAB3Q8N7B9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
EFCAB3Q8N7B9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.5■■□□□ 1.83
EFCAB3Q8N7B9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.5■■□□□ 1.83
EFCAB3Q8N7B9 AC097358.2-201ENST00000607541 1159 ntBASIC26.5■■□□□ 1.83
EFCAB3Q8N7B9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
EFCAB3Q8N7B9 AC139426.1-201ENST00000568218 2529 ntBASIC26.47■■□□□ 1.83
EFCAB3Q8N7B9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
EFCAB3Q8N7B9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
EFCAB3Q8N7B9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.47■■□□□ 1.83
EFCAB3Q8N7B9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.46■■□□□ 1.83
EFCAB3Q8N7B9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
EFCAB3Q8N7B9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.45■■□□□ 1.83
EFCAB3Q8N7B9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
EFCAB3Q8N7B9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
EFCAB3Q8N7B9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
EFCAB3Q8N7B9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
EFCAB3Q8N7B9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
EFCAB3Q8N7B9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
EFCAB3Q8N7B9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.43■■□□□ 1.82
EFCAB3Q8N7B9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
EFCAB3Q8N7B9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
EFCAB3Q8N7B9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
EFCAB3Q8N7B9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
EFCAB3Q8N7B9 AC120057.4-201ENST00000624722 1615 ntBASIC26.39■■□□□ 1.82
EFCAB3Q8N7B9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.39■■□□□ 1.81
EFCAB3Q8N7B9 SETD8P1-201ENST00000623146 1180 ntBASIC26.38■■□□□ 1.81
EFCAB3Q8N7B9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
EFCAB3Q8N7B9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
EFCAB3Q8N7B9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
EFCAB3Q8N7B9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
EFCAB3Q8N7B9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
EFCAB3Q8N7B9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
EFCAB3Q8N7B9 RPS2P35-201ENST00000443417 897 ntBASIC26.32■■□□□ 1.8
EFCAB3Q8N7B9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
EFCAB3Q8N7B9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
EFCAB3Q8N7B9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.31■■□□□ 1.8
EFCAB3Q8N7B9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.3■■□□□ 1.8
EFCAB3Q8N7B9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.3■■□□□ 1.8
EFCAB3Q8N7B9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
EFCAB3Q8N7B9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.3■■□□□ 1.8
EFCAB3Q8N7B9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
EFCAB3Q8N7B9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
EFCAB3Q8N7B9 AC136428.2-201ENST00000563187 214 ntBASIC26.27■■□□□ 1.8
EFCAB3Q8N7B9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.27■■□□□ 1.8
EFCAB3Q8N7B9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
EFCAB3Q8N7B9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
EFCAB3Q8N7B9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
EFCAB3Q8N7B9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
EFCAB3Q8N7B9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
EFCAB3Q8N7B9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
EFCAB3Q8N7B9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
EFCAB3Q8N7B9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
EFCAB3Q8N7B9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.25■■□□□ 1.79
EFCAB3Q8N7B9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
EFCAB3Q8N7B9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
EFCAB3Q8N7B9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
EFCAB3Q8N7B9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
EFCAB3Q8N7B9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
EFCAB3Q8N7B9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
EFCAB3Q8N7B9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
EFCAB3Q8N7B9 SUZ12P1-203ENST00000578195 985 ntBASIC26.21■■□□□ 1.79
EFCAB3Q8N7B9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.2■■□□□ 1.79
EFCAB3Q8N7B9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.2■■□□□ 1.78
EFCAB3Q8N7B9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.2■■□□□ 1.78
EFCAB3Q8N7B9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.2■■□□□ 1.78
EFCAB3Q8N7B9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.19■■□□□ 1.78
EFCAB3Q8N7B9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
EFCAB3Q8N7B9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
EFCAB3Q8N7B9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
EFCAB3Q8N7B9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
EFCAB3Q8N7B9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
EFCAB3Q8N7B9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.17■■□□□ 1.78
EFCAB3Q8N7B9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
EFCAB3Q8N7B9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.15■■□□□ 1.78
EFCAB3Q8N7B9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms