Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV13-1A0A0B4J241 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV13-1A0A0B4J241 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRAV13-1A0A0B4J241 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV13-1A0A0B4J241 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV13-1A0A0B4J241 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV13-1A0A0B4J241 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV13-1A0A0B4J241 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRAV13-1A0A0B4J241 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV13-1A0A0B4J241 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV13-1A0A0B4J241 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV13-1A0A0B4J241 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV13-1A0A0B4J241 ABCB10P3-201ENST00000561950 2166 ntBASIC18.69■□□□□ 0.58
TRAV13-1A0A0B4J241 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TRAV13-1A0A0B4J241 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV13-1A0A0B4J241 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRAV13-1A0A0B4J241 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV13-1A0A0B4J241 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV13-1A0A0B4J241 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV13-1A0A0B4J241 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV13-1A0A0B4J241 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV13-1A0A0B4J241 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV13-1A0A0B4J241 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV13-1A0A0B4J241 AC006077.2-201ENST00000623591 457 ntBASIC18.66■□□□□ 0.58
TRAV13-1A0A0B4J241 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV13-1A0A0B4J241 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.64■□□□□ 0.58
TRAV13-1A0A0B4J241 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV13-1A0A0B4J241 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV13-1A0A0B4J241 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV13-1A0A0B4J241 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV13-1A0A0B4J241 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV13-1A0A0B4J241 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAV13-1A0A0B4J241 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV13-1A0A0B4J241 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV13-1A0A0B4J241 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV13-1A0A0B4J241 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV13-1A0A0B4J241 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRAV13-1A0A0B4J241 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV13-1A0A0B4J241 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV13-1A0A0B4J241 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.58■□□□□ 0.56
TRAV13-1A0A0B4J241 AC139426.1-201ENST00000568218 2529 ntBASIC18.58■□□□□ 0.56
TRAV13-1A0A0B4J241 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV13-1A0A0B4J241 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV13-1A0A0B4J241 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
TRAV13-1A0A0B4J241 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRAV13-1A0A0B4J241 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV13-1A0A0B4J241 AL161658.1-201ENST00000623641 1967 ntBASIC18.57■□□□□ 0.56
TRAV13-1A0A0B4J241 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV13-1A0A0B4J241 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV13-1A0A0B4J241 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV13-1A0A0B4J241 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV13-1A0A0B4J241 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV13-1A0A0B4J241 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV13-1A0A0B4J241 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV13-1A0A0B4J241 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV13-1A0A0B4J241 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV13-1A0A0B4J241 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV13-1A0A0B4J241 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV13-1A0A0B4J241 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV13-1A0A0B4J241 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV13-1A0A0B4J241 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV13-1A0A0B4J241 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV13-1A0A0B4J241 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV13-1A0A0B4J241 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV13-1A0A0B4J241 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV13-1A0A0B4J241 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV13-1A0A0B4J241 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV13-1A0A0B4J241 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV13-1A0A0B4J241 ZNRF2P1-201ENST00000441407 443 ntBASIC18.49■□□□□ 0.55
TRAV13-1A0A0B4J241 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
TRAV13-1A0A0B4J241 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV13-1A0A0B4J241 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRAV13-1A0A0B4J241 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV13-1A0A0B4J241 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV13-1A0A0B4J241 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV13-1A0A0B4J241 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV13-1A0A0B4J241 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV13-1A0A0B4J241 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV13-1A0A0B4J241 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV13-1A0A0B4J241 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV13-1A0A0B4J241 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV13-1A0A0B4J241 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV13-1A0A0B4J241 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRAV13-1A0A0B4J241 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRAV13-1A0A0B4J241 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV13-1A0A0B4J241 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV13-1A0A0B4J241 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV13-1A0A0B4J241 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV13-1A0A0B4J241 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV13-1A0A0B4J241 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV13-1A0A0B4J241 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV13-1A0A0B4J241 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV13-1A0A0B4J241 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV13-1A0A0B4J241 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV13-1A0A0B4J241 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV13-1A0A0B4J241 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV13-1A0A0B4J241 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRAV13-1A0A0B4J241 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV13-1A0A0B4J241 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV13-1A0A0B4J241 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms