RNA–Protein interactions for RNA: ENST00000245304.4

RAP2A-201, Transcript of RAP2A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP2A, Length 5,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP2A-201ENST00000245304 DCAF8L2P0C7V8 631 aa38.49■■■■□ 3.75
RAP2A-201ENST00000245304 SUPT5HO00267 1087 aaKnown RBP37.04■■■■□ 3.52
RAP2A-201ENST00000245304 PELP1Q8IZL8 1130 aaKnown RBP36.4■■■■□ 3.42
RAP2A-201ENST00000245304 EHMT2Q96KQ7 1210 aa36.4■■■■□ 3.42
RAP2A-201ENST00000245304 SHROOM4Q9ULL8 1493 aa35.93■■■■□ 3.34
RAP2A-201ENST00000245304 PCGF6Q9BYE7 350 aa35.36■■■■□ 3.25
RAP2A-201ENST00000245304 APLP2Q06481 763 aa35.31■■■■□ 3.24
RAP2A-201ENST00000245304 TTBK1Q5TCY1 1321 aaPredicted RBP35.27■■■■□ 3.24
RAP2A-201ENST00000245304 ERICH6Q7L0X2 663 aa35.17■■■■□ 3.22
RAP2A-201ENST00000245304 FAM9AQ8IZU1 332 aaPredicted RBP35.13■■■■□ 3.21
RAP2A-201ENST00000245304 NISCHQ9Y2I1 1504 aa35.04■■■■□ 3.2
RAP2A-201ENST00000245304 CENPBP07199 599 aaPredicted RBP35.03■■■■□ 3.2
RAP2A-201ENST00000245304 CCER1Q8TC90 406 aaPredicted RBP34.75■■■■□ 3.15
RAP2A-201ENST00000245304 ZEB1P37275 1124 aaPredicted RBP34.5■■■■□ 3.11
RAP2A-201ENST00000245304 RANGAP1P46060 587 aaPredicted RBP34.48■■■■□ 3.11
RAP2A-201ENST00000245304 YTHDC1Q96MU7 727 aaKnown RBP34.47■■■■□ 3.11
RAP2A-201ENST00000245304 MYT1Q01538 1121 aa34.33■■■■□ 3.09
RAP2A-201ENST00000245304 NEFLP07196 543 aa34.25■■■■□ 3.07
RAP2A-201ENST00000245304 ATP1B4Q9UN42 357 aaPredicted RBP34.04■■■■□ 3.04
RAP2A-201ENST00000245304 TRIM41Q8WV44 630 aa34■■■■□ 3.03
RAP2A-201ENST00000245304 PPARGC1BQ86YN6 1023 aaKnown RBP33.8■■■■□ 3
RAP2A-201ENST00000245304 UBTFP17480 764 aaKnown RBP33.78■■■■□ 3
RAP2A-201ENST00000245304 HRCP23327 699 aa33.45■■■□□ 2.95
RAP2A-201ENST00000245304 DAXXQ9UER7 740 aaPredicted RBP33.39■■■□□ 2.94
RAP2A-201ENST00000245304 TRIM26Q12899 539 aaPredicted RBP33.34■■■□□ 2.93
RAP2A-201ENST00000245304 POLR3GLQ9BT43 218 aa33.18■■■□□ 2.9
RAP2A-201ENST00000245304 ITGAEP38570 1179 aa33.11■■■□□ 2.89
RAP2A-201ENST00000245304 CNGB1Q14028 1251 aaPredicted RBP33.1■■■□□ 2.89
RAP2A-201ENST00000245304 HNRNPUL2Q1KMD3 747 aaKnown RBP32.88■■■□□ 2.85
RAP2A-201ENST00000245304 LOC105371045A0A1W2PR82 267 aa32.87■■■□□ 2.85
RAP2A-201ENST00000245304 RTL5Q5HYW3 569 aaPredicted RBP32.82■■■□□ 2.84
RAP2A-201ENST00000245304 DIEXFQ68CQ4 756 aaKnown RBP32.66■■■□□ 2.82
RAP2A-201ENST00000245304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.62■■■□□ 2.81
RAP2A-201ENST00000245304 ZNF316A6NFI3 1004 aaPredicted RBP32.62■■■□□ 2.81
RAP2A-201ENST00000245304 CLSPNQ9HAW4 1339 aa32.57■■■□□ 2.8
RAP2A-201ENST00000245304 MYT1LQ9UL68 1186 aa32.55■■■□□ 2.8
RAP2A-201ENST00000245304 BCANQ96GW7 911 aa32.49■■■□□ 2.79
RAP2A-201ENST00000245304 CHIC1Q5VXU3 224 aa32.41■■■□□ 2.78
RAP2A-201ENST00000245304 GTF3C3Q9Y5Q9 886 aa32.4■■■□□ 2.78
RAP2A-201ENST00000245304 SLC4A1APQ9BWU0 796 aaKnown RBP32.34■■■□□ 2.77
RAP2A-201ENST00000245304 CDK11AQ9UQ88 783 aaPredicted RBP32■■■□□ 2.71
RAP2A-201ENST00000245304 NEUROD1Q13562 356 aa31.99■■■□□ 2.71
RAP2A-201ENST00000245304 FAM50AQ14320 339 aaKnown RBP31.94■■■□□ 2.7
RAP2A-201ENST00000245304 TRIM52Q96A61 297 aa31.84■■■□□ 2.69
RAP2A-201ENST00000245304 ANP32CO43423 234 aa31.8■■■□□ 2.68
RAP2A-201ENST00000245304 BCL11AQ9H165 835 aa31.75■■■□□ 2.67
RAP2A-201ENST00000245304 ZNF326Q5BKZ1 582 aaKnown RBP31.72■■■□□ 2.67
RAP2A-201ENST00000245304 ACIN1Q9UKV3 1341 aaKnown RBP31.7■■■□□ 2.67
RAP2A-201ENST00000245304 EIF5BO60841 1220 aaKnown RBP31.63■■■□□ 2.65
RAP2A-201ENST00000245304 ZBTB47Q9UFB7 747 aaPredicted RBP31.6■■■□□ 2.65
RAP2A-201ENST00000245304 NPM2Q86SE8 214 aaKnown RBP31.54■■■□□ 2.64
RAP2A-201ENST00000245304 ANP32AP39687 249 aaKnown RBP31.52■■■□□ 2.64
RAP2A-201ENST00000245304 CANXP27824 592 aaKnown RBP31.48■■■□□ 2.63
RAP2A-201ENST00000245304 SLC24A1O60721 1099 aa31.31■■■□□ 2.6
RAP2A-201ENST00000245304 FKBP8Q14318 412 aa31.28■■■□□ 2.6
RAP2A-201ENST00000245304 ANP32BQ92688 251 aaKnown RBP31.05■■■□□ 2.56
RAP2A-201ENST00000245304 NBR1Q14596 966 aa31.04■■■□□ 2.56
RAP2A-201ENST00000245304 NEFMP07197 916 aa31.02■■■□□ 2.56
RAP2A-201ENST00000245304 HSP90AA1P07900 732 aaKnown RBP31■■■□□ 2.55
RAP2A-201ENST00000245304 HNRNPUQ00839 825 aaKnown RBP eCLIP30.97■■■□□ 2.55
RAP2A-201ENST00000245304 ARXQ96QS3 562 aa30.94■■■□□ 2.54
RAP2A-201ENST00000245304 ARID3CA6NKF2 412 aa30.92■■■□□ 2.54
RAP2A-201ENST00000245304 GLIPR1L2Q4G1C9 344 aa30.91■■■□□ 2.54
RAP2A-201ENST00000245304 P3H3Q8IVL6 736 aa30.88■■■□□ 2.53
RAP2A-201ENST00000245304 FAM9BQ8IZU0 186 aa30.87■■■□□ 2.53
RAP2A-201ENST00000245304 SALL2Q9Y467 1007 aaPredicted RBP30.87■■■□□ 2.53
RAP2A-201ENST00000245304 DDX10Q13206 875 aaKnown RBP30.84■■■□□ 2.53
RAP2A-201ENST00000245304 UPF2Q9HAU5 1272 aaKnown RBP30.8■■■□□ 2.52
RAP2A-201ENST00000245304 FBLN2P98095 1184 aa30.75■■■□□ 2.51
RAP2A-201ENST00000245304 CCDC136Q96JN2 1154 aa30.74■■■□□ 2.51
RAP2A-201ENST00000245304 SCAF1Q9H7N4 1312 aaKnown RBP30.74■■■□□ 2.51
RAP2A-201ENST00000245304 ZNF777Q9ULD5 760 aaPredicted RBP30.68■■■□□ 2.5
RAP2A-201ENST00000245304 PABPN1Q86U42 306 aaKnown RBP eCLIP30.68■■■□□ 2.5
RAP2A-201ENST00000245304 IRX6P78412 446 aaPredicted RBP30.65■■■□□ 2.5
RAP2A-201ENST00000245304 TONSLQ96HA7 1378 aa30.61■■■□□ 2.49
RAP2A-201ENST00000245304 CSRNP3Q8WYN3 585 aa30.58■■■□□ 2.49
RAP2A-201ENST00000245304 TMC1Q8TDI8 760 aa30.48■■■□□ 2.47
RAP2A-201ENST00000245304 MIER1Q8N108 512 aa30.47■■■□□ 2.47
RAP2A-201ENST00000245304 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.45■■■□□ 2.47
RAP2A-201ENST00000245304 MRS2Q9HD23 443 aa30.41■■■□□ 2.46
RAP2A-201ENST00000245304 CHGAP10645 457 aaKnown RBP30.4■■■□□ 2.46
RAP2A-201ENST00000245304 HIRIP3Q9BW71 556 aaPredicted RBP30.35■■■□□ 2.45
RAP2A-201ENST00000245304 WDR43Q15061 677 aaKnown RBP eCLIP30.24■■■□□ 2.43
RAP2A-201ENST00000245304 CHIC2Q9UKJ5 165 aa30.23■■■□□ 2.43
RAP2A-201ENST00000245304 ANP32EQ9BTT0 268 aa30.17■■■□□ 2.42
RAP2A-201ENST00000245304 TRIM44Q96DX7 344 aaPredicted RBP30.17■■■□□ 2.42
RAP2A-201ENST00000245304 SENP3-EIF4A1A0A087X0R7 540 aa30.15■■■□□ 2.42
RAP2A-201ENST00000245304 STAG3Q9UJ98 1225 aa30.13■■■□□ 2.41
RAP2A-201ENST00000245304 KDM2AQ9Y2K7 1162 aa30.13■■■□□ 2.41
RAP2A-201ENST00000245304 RTN4Q9NQC3 1192 aaKnown RBP30.12■■■□□ 2.41
RAP2A-201ENST00000245304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.07■■■□□ 2.43e-10■□□□□ 10.3
RAP2A-201ENST00000245304 ABCC9O60706 1549 aa30.06■■■□□ 2.4
RAP2A-201ENST00000245304 DCAF1Q9Y4B6 1507 aa30.05■■■□□ 2.4
RAP2A-201ENST00000245304 PLPPR3Q6T4P5 718 aa30.05■■■□□ 2.4
RAP2A-201ENST00000245304 BECN1Q14457 450 aa30.04■■■□□ 2.4
RAP2A-201ENST00000245304 DDRGK1Q96HY6 314 aa30.04■■■□□ 2.4
RAP2A-201ENST00000245304 ESF1Q9H501 851 aaKnown RBP30.02■■■□□ 2.4
RAP2A-201ENST00000245304 MYH16Q9H6N6 1097 aa29.99■■■□□ 2.39
RAP2A-201ENST00000245304 NCLP19338 710 aaKnown RBP29.99■■■□□ 2.39
RAP2A-201ENST00000245304 LAS1LQ9Y4W2 734 aaKnown RBP29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms