RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 DCAF8L2P0C7V8 631 aa40.41■■■■■ 4.06
TARBP1-201ENST00000040877 NISCHQ9Y2I1 1504 aa39.45■■■■□ 3.91
TARBP1-201ENST00000040877 SUPT5HO00267 1087 aaKnown RBP38.23■■■■□ 3.71
TARBP1-201ENST00000040877 SHROOM4Q9ULL8 1493 aa37.61■■■■□ 3.61
TARBP1-201ENST00000040877 APLP2Q06481 763 aa36.57■■■■□ 3.44
TARBP1-201ENST00000040877 EHMT2Q96KQ7 1210 aa36.56■■■■□ 3.44
TARBP1-201ENST00000040877 FAM9AQ8IZU1 332 aaPredicted RBP36.28■■■■□ 3.4
TARBP1-201ENST00000040877 PELP1Q8IZL8 1130 aaKnown RBP35.97■■■■□ 3.35
TARBP1-201ENST00000040877 TRIM41Q8WV44 630 aa35.66■■■■□ 3.3
TARBP1-201ENST00000040877 PCGF6Q9BYE7 350 aa35.35■■■■□ 3.25
TARBP1-201ENST00000040877 TTBK1Q5TCY1 1321 aaPredicted RBP35.35■■■■□ 3.25
TARBP1-201ENST00000040877 ZEB1P37275 1124 aaPredicted RBP35.23■■■■□ 3.23
TARBP1-201ENST00000040877 RANGAP1P46060 587 aaPredicted RBP35.22■■■■□ 3.23
TARBP1-201ENST00000040877 UBTFP17480 764 aaKnown RBP35.19■■■■□ 3.22
TARBP1-201ENST00000040877 ATP1B4Q9UN42 357 aaPredicted RBP35.1■■■■□ 3.21
TARBP1-201ENST00000040877 CCER1Q8TC90 406 aaPredicted RBP34.97■■■■□ 3.19
TARBP1-201ENST00000040877 CENPBP07199 599 aaPredicted RBP34.78■■■■□ 3.16
TARBP1-201ENST00000040877 MYT1Q01538 1121 aa34.34■■■■□ 3.09
TARBP1-201ENST00000040877 TRIM26Q12899 539 aaPredicted RBP34.24■■■■□ 3.07
TARBP1-201ENST00000040877 ERICH6Q7L0X2 663 aa34.15■■■■□ 3.06
TARBP1-201ENST00000040877 NEFLP07196 543 aa34.13■■■■□ 3.05
TARBP1-201ENST00000040877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.04■■■■□ 3.04
TARBP1-201ENST00000040877 HNRNPUL2Q1KMD3 747 aaKnown RBP34.04■■■■□ 3.04
TARBP1-201ENST00000040877 CHIC1Q5VXU3 224 aa34.04■■■■□ 3.04
TARBP1-201ENST00000040877 PPARGC1BQ86YN6 1023 aaKnown RBP34.04■■■■□ 3.04
TARBP1-201ENST00000040877 ABCC9O60706 1549 aa33.9■■■■□ 3.02
TARBP1-201ENST00000040877 MYT1LQ9UL68 1186 aa33.88■■■■□ 3.01
TARBP1-201ENST00000040877 ITGAEP38570 1179 aa33.8■■■■□ 3
TARBP1-201ENST00000040877 LOC105371045A0A1W2PR82 267 aa33.74■■■□□ 2.99
TARBP1-201ENST00000040877 YTHDC1Q96MU7 727 aaKnown RBP33.73■■■□□ 2.99
TARBP1-201ENST00000040877 PABPN1Q86U42 306 aaKnown RBP eCLIP33.61■■■□□ 2.976e-9■□□□□ 10.6
TARBP1-201ENST00000040877 HRCP23327 699 aa33.55■■■□□ 2.96
TARBP1-201ENST00000040877 POLR3GLQ9BT43 218 aa33.41■■■□□ 2.94
TARBP1-201ENST00000040877 FAM50AQ14320 339 aaKnown RBP33.16■■■□□ 2.9
TARBP1-201ENST00000040877 DAXXQ9UER7 740 aaPredicted RBP33.03■■■□□ 2.88
TARBP1-201ENST00000040877 TRIM52Q96A61 297 aa32.98■■■□□ 2.87
TARBP1-201ENST00000040877 SLC4A1APQ9BWU0 796 aaKnown RBP32.89■■■□□ 2.86
TARBP1-201ENST00000040877 CNGB1Q14028 1251 aaPredicted RBP32.83■■■□□ 2.85
TARBP1-201ENST00000040877 FBLN2P98095 1184 aa32.81■■■□□ 2.84
TARBP1-201ENST00000040877 DIEXFQ68CQ4 756 aaKnown RBP32.78■■■□□ 2.84
TARBP1-201ENST00000040877 CSRNP3Q8WYN3 585 aa32.75■■■□□ 2.83
TARBP1-201ENST00000040877 NEUROD1Q13562 356 aa32.66■■■□□ 2.82
TARBP1-201ENST00000040877 ZCCHC6Q5VYS8 1495 aaKnown RBP32.64■■■□□ 2.82
TARBP1-201ENST00000040877 SCRIBQ14160 1630 aa32.63■■■□□ 2.81
TARBP1-201ENST00000040877 CDK11AQ9UQ88 783 aaPredicted RBP32.51■■■□□ 2.79
TARBP1-201ENST00000040877 CCDC180Q9P1Z9 1646 aa32.47■■■□□ 2.79
TARBP1-201ENST00000040877 ANP32CO43423 234 aa32.44■■■□□ 2.78
TARBP1-201ENST00000040877 ZNF326Q5BKZ1 582 aaKnown RBP32.43■■■□□ 2.78
TARBP1-201ENST00000040877 CLSPNQ9HAW4 1339 aa32.41■■■□□ 2.78
TARBP1-201ENST00000040877 P3H3Q8IVL6 736 aa32.4■■■□□ 2.78
TARBP1-201ENST00000040877 ZNF316A6NFI3 1004 aaPredicted RBP32.23■■■□□ 2.75
TARBP1-201ENST00000040877 ARID3CA6NKF2 412 aa32.18■■■□□ 2.74
TARBP1-201ENST00000040877 ZNF777Q9ULD5 760 aaPredicted RBP32.17■■■□□ 2.74
TARBP1-201ENST00000040877 GTF3C3Q9Y5Q9 886 aa32.13■■■□□ 2.73
TARBP1-201ENST00000040877 RTL5Q5HYW3 569 aaPredicted RBP32.1■■■□□ 2.73
TARBP1-201ENST00000040877 NEFMP07197 916 aa32.08■■■□□ 2.73
TARBP1-201ENST00000040877 ZBTB47Q9UFB7 747 aaPredicted RBP32.06■■■□□ 2.72
TARBP1-201ENST00000040877 RB1CC1Q8TDY2 1594 aa32.02■■■□□ 2.72
TARBP1-201ENST00000040877 BCANQ96GW7 911 aa32.02■■■□□ 2.72
TARBP1-201ENST00000040877 NPM1P06748 294 aaKnown RBP eCLIP31.99■■■□□ 2.71
TARBP1-201ENST00000040877 ESF1Q9H501 851 aaKnown RBP31.96■■■□□ 2.71
TARBP1-201ENST00000040877 TONSLQ96HA7 1378 aa31.88■■■□□ 2.69
TARBP1-201ENST00000040877 DCAF1Q9Y4B6 1507 aa31.86■■■□□ 2.69
TARBP1-201ENST00000040877 CANXP27824 592 aaKnown RBP31.86■■■□□ 2.69
TARBP1-201ENST00000040877 NACADO15069 1562 aa31.72■■■□□ 2.67
TARBP1-201ENST00000040877 STAG3Q9UJ98 1225 aa31.7■■■□□ 2.67
TARBP1-201ENST00000040877 ACIN1Q9UKV3 1341 aaKnown RBP31.7■■■□□ 2.66
TARBP1-201ENST00000040877 SLC24A1O60721 1099 aa31.68■■■□□ 2.66
TARBP1-201ENST00000040877 EEA1Q15075 1411 aa31.68■■■□□ 2.66
TARBP1-201ENST00000040877 CHMP7Q8WUX9 453 aaPredicted RBP31.66■■■□□ 2.66
TARBP1-201ENST00000040877 TSPY4P0CV99 314 aa31.65■■■□□ 2.66
TARBP1-201ENST00000040877 TSPY10P0CW01 314 aa31.65■■■□□ 2.66
TARBP1-201ENST00000040877 MTUS2Q5JR59 1369 aa31.65■■■□□ 2.66
TARBP1-201ENST00000040877 CHGAP10645 457 aaKnown RBP31.64■■■□□ 2.66
TARBP1-201ENST00000040877 CLIP1P30622 1438 aa31.57■■■□□ 2.65
TARBP1-201ENST00000040877 RSF1Q96T23 1441 aaPredicted RBP31.54■■■□□ 2.64
TARBP1-201ENST00000040877 CHIC2Q9UKJ5 165 aa31.5■■■□□ 2.63
TARBP1-201ENST00000040877 BAZ1BQ9UIG0 1483 aaKnown RBP31.45■■■□□ 2.63
TARBP1-201ENST00000040877 GOLGA3Q08378 1498 aa31.43■■■□□ 2.62
TARBP1-201ENST00000040877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.42■■■□□ 2.629e-7■■■□□ 18.7
TARBP1-201ENST00000040877 WRNQ14191 1432 aaPredicted RBP eCLIP31.38■■■□□ 2.61
TARBP1-201ENST00000040877 ANP32AP39687 249 aaKnown RBP31.32■■■□□ 2.61
TARBP1-201ENST00000040877 DDX10Q13206 875 aaKnown RBP31.32■■■□□ 2.6
TARBP1-201ENST00000040877 KIF27Q86VH2 1401 aa31.3■■■□□ 2.6
TARBP1-201ENST00000040877 PLEKHD1A6NEE1 506 aa31.3■■■□□ 2.6
TARBP1-201ENST00000040877 HNRNPUQ00839 825 aaKnown RBP eCLIP31.28■■■□□ 2.64e-6■■□□□ 11.5
TARBP1-201ENST00000040877 BCL11AQ9H165 835 aa31.27■■■□□ 2.6
TARBP1-201ENST00000040877 TMC1Q8TDI8 760 aa31.24■■■□□ 2.59
TARBP1-201ENST00000040877 CEP162Q5TB80 1403 aa31.21■■■□□ 2.59
TARBP1-201ENST00000040877 BAZ1AQ9NRL2 1556 aaPredicted RBP31.21■■■□□ 2.59
TARBP1-201ENST00000040877 FAM9BQ8IZU0 186 aa31.19■■■□□ 2.58
TARBP1-201ENST00000040877 CEP164Q9UPV0 1460 aa31.16■■■□□ 2.58
TARBP1-201ENST00000040877 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.15■■■□□ 2.58
TARBP1-201ENST00000040877 KDM2AQ9Y2K7 1162 aa31.15■■■□□ 2.58
TARBP1-201ENST00000040877 PLPPR3Q6T4P5 718 aa31.14■■■□□ 2.58
TARBP1-201ENST00000040877 WDR43Q15061 677 aaKnown RBP eCLIP31.14■■■□□ 2.58
TARBP1-201ENST00000040877 TNIKQ9UKE5 1360 aa31.12■■■□□ 2.57
TARBP1-201ENST00000040877 EIF4G2P78344 907 aaKnown RBP eCLIP31.1■■■□□ 2.57
TARBP1-201ENST00000040877 FKBP8Q14318 412 aa31.09■■■□□ 2.57
TARBP1-201ENST00000040877 UPF2Q9HAU5 1272 aaKnown RBP31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms