Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NIPAL1Q6NVV3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NIPAL1Q6NVV3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.59■■□□□ 1.85
NIPAL1Q6NVV3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NIPAL1Q6NVV3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.57■■□□□ 1.84
NIPAL1Q6NVV3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
NIPAL1Q6NVV3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
NIPAL1Q6NVV3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.54■■□□□ 1.84
NIPAL1Q6NVV3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
NIPAL1Q6NVV3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.53■■□□□ 1.84
NIPAL1Q6NVV3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.51■■□□□ 1.84
NIPAL1Q6NVV3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
NIPAL1Q6NVV3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.51■■□□□ 1.83
NIPAL1Q6NVV3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NIPAL1Q6NVV3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NIPAL1Q6NVV3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NIPAL1Q6NVV3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
NIPAL1Q6NVV3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.45■■□□□ 1.82
NIPAL1Q6NVV3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.45■■□□□ 1.82
NIPAL1Q6NVV3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.45■■□□□ 1.82
NIPAL1Q6NVV3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.44■■□□□ 1.82
NIPAL1Q6NVV3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.43■■□□□ 1.82
NIPAL1Q6NVV3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.43■■□□□ 1.82
NIPAL1Q6NVV3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NIPAL1Q6NVV3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NIPAL1Q6NVV3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.41■■□□□ 1.82
NIPAL1Q6NVV3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.39■■□□□ 1.82
NIPAL1Q6NVV3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
NIPAL1Q6NVV3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NIPAL1Q6NVV3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NIPAL1Q6NVV3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NIPAL1Q6NVV3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NIPAL1Q6NVV3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NIPAL1Q6NVV3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.33■■□□□ 1.81
NIPAL1Q6NVV3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.33■■□□□ 1.81
NIPAL1Q6NVV3 AL161658.1-201ENST00000623641 1967 ntBASIC26.33■■□□□ 1.8
NIPAL1Q6NVV3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NIPAL1Q6NVV3 RARRES2P7-201ENST00000567349 469 ntBASIC26.31■■□□□ 1.8
NIPAL1Q6NVV3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.29■■□□□ 1.8
NIPAL1Q6NVV3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.29■■□□□ 1.8
NIPAL1Q6NVV3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.28■■□□□ 1.8
NIPAL1Q6NVV3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NIPAL1Q6NVV3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.27■■□□□ 1.8
NIPAL1Q6NVV3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.27■■□□□ 1.8
NIPAL1Q6NVV3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NIPAL1Q6NVV3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
NIPAL1Q6NVV3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NIPAL1Q6NVV3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
NIPAL1Q6NVV3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NIPAL1Q6NVV3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NIPAL1Q6NVV3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NIPAL1Q6NVV3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NIPAL1Q6NVV3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NIPAL1Q6NVV3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NIPAL1Q6NVV3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.17■■□□□ 1.78
NIPAL1Q6NVV3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.15■■□□□ 1.78
NIPAL1Q6NVV3 SETD8P1-201ENST00000623146 1180 ntBASIC26.15■■□□□ 1.78
NIPAL1Q6NVV3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
NIPAL1Q6NVV3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
NIPAL1Q6NVV3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NIPAL1Q6NVV3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.13■■□□□ 1.77
NIPAL1Q6NVV3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
NIPAL1Q6NVV3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
NIPAL1Q6NVV3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NIPAL1Q6NVV3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NIPAL1Q6NVV3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NIPAL1Q6NVV3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NIPAL1Q6NVV3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
NIPAL1Q6NVV3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.08■■□□□ 1.77
NIPAL1Q6NVV3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
NIPAL1Q6NVV3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NIPAL1Q6NVV3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
NIPAL1Q6NVV3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
NIPAL1Q6NVV3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.07■■□□□ 1.76
NIPAL1Q6NVV3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.07■■□□□ 1.76
NIPAL1Q6NVV3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
NIPAL1Q6NVV3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NIPAL1Q6NVV3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NIPAL1Q6NVV3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
NIPAL1Q6NVV3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
NIPAL1Q6NVV3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.04■■□□□ 1.76
NIPAL1Q6NVV3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
NIPAL1Q6NVV3 AL133380.1-201ENST00000506013 324 ntBASIC26.04■■□□□ 1.76
NIPAL1Q6NVV3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NIPAL1Q6NVV3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NIPAL1Q6NVV3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NIPAL1Q6NVV3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26■■□□□ 1.75
NIPAL1Q6NVV3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NIPAL1Q6NVV3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NIPAL1Q6NVV3 AC097358.2-201ENST00000607541 1159 ntBASIC25.98■■□□□ 1.75
NIPAL1Q6NVV3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
NIPAL1Q6NVV3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
NIPAL1Q6NVV3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NIPAL1Q6NVV3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.96■■□□□ 1.75
NIPAL1Q6NVV3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.96■■□□□ 1.75
NIPAL1Q6NVV3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.75
NIPAL1Q6NVV3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
NIPAL1Q6NVV3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NIPAL1Q6NVV3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NIPAL1Q6NVV3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms