Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
NIPAL1Q6NVV3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
NIPAL1Q6NVV3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.64
NIPAL1Q6NVV3 AL356512.1-201ENST00000607453 1739 ntBASIC31.5■■■□□ 2.63
NIPAL1Q6NVV3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NIPAL1Q6NVV3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NIPAL1Q6NVV3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.29■■■□□ 2.6
NIPAL1Q6NVV3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.08■■■□□ 2.57
NIPAL1Q6NVV3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
NIPAL1Q6NVV3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.68■■■□□ 2.5
NIPAL1Q6NVV3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
NIPAL1Q6NVV3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
NIPAL1Q6NVV3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.5■■■□□ 2.47
NIPAL1Q6NVV3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.39■■■□□ 2.46
NIPAL1Q6NVV3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
NIPAL1Q6NVV3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
NIPAL1Q6NVV3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
NIPAL1Q6NVV3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
NIPAL1Q6NVV3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.06■■■□□ 2.4
NIPAL1Q6NVV3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
NIPAL1Q6NVV3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.9■■■□□ 2.38
NIPAL1Q6NVV3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
NIPAL1Q6NVV3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.83■■■□□ 2.37
NIPAL1Q6NVV3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NIPAL1Q6NVV3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NIPAL1Q6NVV3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
NIPAL1Q6NVV3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
NIPAL1Q6NVV3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
NIPAL1Q6NVV3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
NIPAL1Q6NVV3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.34■■■□□ 2.29
NIPAL1Q6NVV3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
NIPAL1Q6NVV3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
NIPAL1Q6NVV3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.17■■■□□ 2.26
NIPAL1Q6NVV3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
NIPAL1Q6NVV3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.08■■■□□ 2.25
NIPAL1Q6NVV3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
NIPAL1Q6NVV3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
NIPAL1Q6NVV3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
NIPAL1Q6NVV3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
NIPAL1Q6NVV3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
NIPAL1Q6NVV3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
NIPAL1Q6NVV3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
NIPAL1Q6NVV3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
NIPAL1Q6NVV3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.92■■■□□ 2.22
NIPAL1Q6NVV3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.91■■■□□ 2.22
NIPAL1Q6NVV3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
NIPAL1Q6NVV3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
NIPAL1Q6NVV3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
NIPAL1Q6NVV3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
NIPAL1Q6NVV3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
NIPAL1Q6NVV3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.76■■■□□ 2.19
NIPAL1Q6NVV3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.73■■■□□ 2.19
NIPAL1Q6NVV3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.71■■■□□ 2.19
NIPAL1Q6NVV3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
NIPAL1Q6NVV3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
NIPAL1Q6NVV3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
NIPAL1Q6NVV3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
NIPAL1Q6NVV3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
NIPAL1Q6NVV3 AC015813.7-201ENST00000623294 581 ntBASIC28.49■■■□□ 2.15
NIPAL1Q6NVV3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
NIPAL1Q6NVV3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
NIPAL1Q6NVV3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.34■■■□□ 2.13
NIPAL1Q6NVV3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NIPAL1Q6NVV3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.27■■■□□ 2.12
NIPAL1Q6NVV3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.26■■■□□ 2.11
NIPAL1Q6NVV3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.22■■■□□ 2.11
NIPAL1Q6NVV3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.18■■■□□ 2.1
NIPAL1Q6NVV3 AC006077.2-201ENST00000623591 457 ntBASIC28.17■■■□□ 2.1
NIPAL1Q6NVV3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NIPAL1Q6NVV3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
NIPAL1Q6NVV3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
NIPAL1Q6NVV3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
NIPAL1Q6NVV3 ZNRF2P1-201ENST00000441407 443 ntBASIC28■■■□□ 2.07
NIPAL1Q6NVV3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
NIPAL1Q6NVV3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
NIPAL1Q6NVV3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
NIPAL1Q6NVV3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
NIPAL1Q6NVV3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
NIPAL1Q6NVV3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
NIPAL1Q6NVV3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
NIPAL1Q6NVV3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
NIPAL1Q6NVV3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
NIPAL1Q6NVV3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
NIPAL1Q6NVV3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
NIPAL1Q6NVV3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
NIPAL1Q6NVV3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
NIPAL1Q6NVV3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.73■■■□□ 2.03
NIPAL1Q6NVV3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
NIPAL1Q6NVV3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
NIPAL1Q6NVV3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
NIPAL1Q6NVV3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
NIPAL1Q6NVV3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
NIPAL1Q6NVV3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.01
NIPAL1Q6NVV3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
NIPAL1Q6NVV3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
NIPAL1Q6NVV3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.57■■■□□ 2
NIPAL1Q6NVV3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
NIPAL1Q6NVV3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.57■■■□□ 2
NIPAL1Q6NVV3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.52■■■□□ 2
NIPAL1Q6NVV3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms