Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SND1-IT1Q9HBX3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SND1-IT1Q9HBX3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC19.22■□□□□ 0.67
SND1-IT1Q9HBX3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SND1-IT1Q9HBX3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SND1-IT1Q9HBX3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SND1-IT1Q9HBX3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SND1-IT1Q9HBX3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.17■□□□□ 0.66
SND1-IT1Q9HBX3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SND1-IT1Q9HBX3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SND1-IT1Q9HBX3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.15■□□□□ 0.66
SND1-IT1Q9HBX3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SND1-IT1Q9HBX3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SND1-IT1Q9HBX3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
SND1-IT1Q9HBX3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SND1-IT1Q9HBX3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.12■□□□□ 0.65
SND1-IT1Q9HBX3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SND1-IT1Q9HBX3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
SND1-IT1Q9HBX3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SND1-IT1Q9HBX3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.11■□□□□ 0.65
SND1-IT1Q9HBX3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SND1-IT1Q9HBX3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SND1-IT1Q9HBX3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SND1-IT1Q9HBX3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SND1-IT1Q9HBX3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SND1-IT1Q9HBX3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SND1-IT1Q9HBX3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SND1-IT1Q9HBX3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SND1-IT1Q9HBX3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SND1-IT1Q9HBX3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19■□□□□ 0.63
SND1-IT1Q9HBX3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SND1-IT1Q9HBX3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SND1-IT1Q9HBX3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.98■□□□□ 0.63
SND1-IT1Q9HBX3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SND1-IT1Q9HBX3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SND1-IT1Q9HBX3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SND1-IT1Q9HBX3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SND1-IT1Q9HBX3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SND1-IT1Q9HBX3 AC145285.7-201ENST00000614819 1539 ntBASIC18.94■□□□□ 0.62
SND1-IT1Q9HBX3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SND1-IT1Q9HBX3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SND1-IT1Q9HBX3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SND1-IT1Q9HBX3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SND1-IT1Q9HBX3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SND1-IT1Q9HBX3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SND1-IT1Q9HBX3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SND1-IT1Q9HBX3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.87■□□□□ 0.61
SND1-IT1Q9HBX3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SND1-IT1Q9HBX3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SND1-IT1Q9HBX3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SND1-IT1Q9HBX3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SND1-IT1Q9HBX3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SND1-IT1Q9HBX3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.83■□□□□ 0.61
SND1-IT1Q9HBX3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SND1-IT1Q9HBX3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SND1-IT1Q9HBX3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SND1-IT1Q9HBX3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SND1-IT1Q9HBX3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.8■□□□□ 0.6
SND1-IT1Q9HBX3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SND1-IT1Q9HBX3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SND1-IT1Q9HBX3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SND1-IT1Q9HBX3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SND1-IT1Q9HBX3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SND1-IT1Q9HBX3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SND1-IT1Q9HBX3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.76■□□□□ 0.59
SND1-IT1Q9HBX3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SND1-IT1Q9HBX3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SND1-IT1Q9HBX3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SND1-IT1Q9HBX3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC18.74■□□□□ 0.59
SND1-IT1Q9HBX3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SND1-IT1Q9HBX3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SND1-IT1Q9HBX3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.69■□□□□ 0.58
SND1-IT1Q9HBX3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SND1-IT1Q9HBX3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SND1-IT1Q9HBX3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SND1-IT1Q9HBX3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SND1-IT1Q9HBX3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SND1-IT1Q9HBX3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SND1-IT1Q9HBX3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SND1-IT1Q9HBX3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SND1-IT1Q9HBX3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SND1-IT1Q9HBX3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SND1-IT1Q9HBX3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SND1-IT1Q9HBX3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SND1-IT1Q9HBX3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SND1-IT1Q9HBX3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SND1-IT1Q9HBX3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SND1-IT1Q9HBX3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SND1-IT1Q9HBX3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SND1-IT1Q9HBX3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SND1-IT1Q9HBX3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.59■□□□□ 0.57
SND1-IT1Q9HBX3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SND1-IT1Q9HBX3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SND1-IT1Q9HBX3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SND1-IT1Q9HBX3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.56■□□□□ 0.56
SND1-IT1Q9HBX3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SND1-IT1Q9HBX3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SND1-IT1Q9HBX3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SND1-IT1Q9HBX3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SND1-IT1Q9HBX3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms