Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SND1-IT1Q9HBX3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
SND1-IT1Q9HBX3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.05■■□□□ 1.12
SND1-IT1Q9HBX3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SND1-IT1Q9HBX3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SND1-IT1Q9HBX3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SND1-IT1Q9HBX3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.45■■□□□ 1.02
SND1-IT1Q9HBX3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SND1-IT1Q9HBX3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SND1-IT1Q9HBX3 AL356512.1-201ENST00000607453 1739 ntBASIC21.32■■□□□ 1
SND1-IT1Q9HBX3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SND1-IT1Q9HBX3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.21■□□□□ 0.99
SND1-IT1Q9HBX3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.16■□□□□ 0.98
SND1-IT1Q9HBX3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SND1-IT1Q9HBX3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SND1-IT1Q9HBX3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.05■□□□□ 0.96
SND1-IT1Q9HBX3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SND1-IT1Q9HBX3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.99■□□□□ 0.95
SND1-IT1Q9HBX3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SND1-IT1Q9HBX3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SND1-IT1Q9HBX3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SND1-IT1Q9HBX3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SND1-IT1Q9HBX3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SND1-IT1Q9HBX3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SND1-IT1Q9HBX3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SND1-IT1Q9HBX3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SND1-IT1Q9HBX3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SND1-IT1Q9HBX3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.33■□□□□ 0.85
SND1-IT1Q9HBX3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SND1-IT1Q9HBX3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SND1-IT1Q9HBX3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SND1-IT1Q9HBX3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SND1-IT1Q9HBX3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SND1-IT1Q9HBX3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SND1-IT1Q9HBX3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SND1-IT1Q9HBX3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SND1-IT1Q9HBX3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SND1-IT1Q9HBX3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SND1-IT1Q9HBX3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SND1-IT1Q9HBX3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SND1-IT1Q9HBX3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SND1-IT1Q9HBX3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SND1-IT1Q9HBX3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SND1-IT1Q9HBX3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SND1-IT1Q9HBX3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SND1-IT1Q9HBX3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SND1-IT1Q9HBX3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.87■□□□□ 0.77
SND1-IT1Q9HBX3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SND1-IT1Q9HBX3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.85■□□□□ 0.77
SND1-IT1Q9HBX3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SND1-IT1Q9HBX3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SND1-IT1Q9HBX3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SND1-IT1Q9HBX3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SND1-IT1Q9HBX3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SND1-IT1Q9HBX3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SND1-IT1Q9HBX3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.68■□□□□ 0.74
SND1-IT1Q9HBX3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SND1-IT1Q9HBX3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SND1-IT1Q9HBX3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SND1-IT1Q9HBX3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SND1-IT1Q9HBX3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SND1-IT1Q9HBX3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SND1-IT1Q9HBX3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SND1-IT1Q9HBX3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SND1-IT1Q9HBX3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SND1-IT1Q9HBX3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SND1-IT1Q9HBX3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SND1-IT1Q9HBX3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC19.54■□□□□ 0.72
SND1-IT1Q9HBX3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.52■□□□□ 0.72
SND1-IT1Q9HBX3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SND1-IT1Q9HBX3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.48■□□□□ 0.71
SND1-IT1Q9HBX3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SND1-IT1Q9HBX3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SND1-IT1Q9HBX3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SND1-IT1Q9HBX3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SND1-IT1Q9HBX3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SND1-IT1Q9HBX3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.4■□□□□ 0.7
SND1-IT1Q9HBX3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SND1-IT1Q9HBX3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SND1-IT1Q9HBX3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.39■□□□□ 0.69
SND1-IT1Q9HBX3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SND1-IT1Q9HBX3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SND1-IT1Q9HBX3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SND1-IT1Q9HBX3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.37■□□□□ 0.69
SND1-IT1Q9HBX3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.37■□□□□ 0.69
SND1-IT1Q9HBX3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.37■□□□□ 0.69
SND1-IT1Q9HBX3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SND1-IT1Q9HBX3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SND1-IT1Q9HBX3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SND1-IT1Q9HBX3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SND1-IT1Q9HBX3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SND1-IT1Q9HBX3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.32■□□□□ 0.68
SND1-IT1Q9HBX3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SND1-IT1Q9HBX3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
SND1-IT1Q9HBX3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.31■□□□□ 0.68
SND1-IT1Q9HBX3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SND1-IT1Q9HBX3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
SND1-IT1Q9HBX3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SND1-IT1Q9HBX3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SND1-IT1Q9HBX3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms