Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
IGKV3D-20A0A0C4DH25 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.3■■□□□ 1
IGKV3D-20A0A0C4DH25 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
IGKV3D-20A0A0C4DH25 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.29■■□□□ 1
IGKV3D-20A0A0C4DH25 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.28■■□□□ 1
IGKV3D-20A0A0C4DH25 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
IGKV3D-20A0A0C4DH25 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.25■□□□□ 0.99
IGKV3D-20A0A0C4DH25 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
IGKV3D-20A0A0C4DH25 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IGKV3D-20A0A0C4DH25 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IGKV3D-20A0A0C4DH25 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
IGKV3D-20A0A0C4DH25 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
IGKV3D-20A0A0C4DH25 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGKV3D-20A0A0C4DH25 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IGKV3D-20A0A0C4DH25 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGKV3D-20A0A0C4DH25 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGKV3D-20A0A0C4DH25 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IGKV3D-20A0A0C4DH25 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.17■□□□□ 0.98
IGKV3D-20A0A0C4DH25 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.17■□□□□ 0.98
IGKV3D-20A0A0C4DH25 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IGKV3D-20A0A0C4DH25 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IGKV3D-20A0A0C4DH25 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
IGKV3D-20A0A0C4DH25 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IGKV3D-20A0A0C4DH25 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
IGKV3D-20A0A0C4DH25 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IGKV3D-20A0A0C4DH25 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
IGKV3D-20A0A0C4DH25 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
IGKV3D-20A0A0C4DH25 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC21.12■□□□□ 0.97
IGKV3D-20A0A0C4DH25 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IGKV3D-20A0A0C4DH25 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGKV3D-20A0A0C4DH25 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
IGKV3D-20A0A0C4DH25 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IGKV3D-20A0A0C4DH25 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
IGKV3D-20A0A0C4DH25 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.07■□□□□ 0.96
IGKV3D-20A0A0C4DH25 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGKV3D-20A0A0C4DH25 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGKV3D-20A0A0C4DH25 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV3D-20A0A0C4DH25 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IGKV3D-20A0A0C4DH25 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
IGKV3D-20A0A0C4DH25 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGKV3D-20A0A0C4DH25 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IGKV3D-20A0A0C4DH25 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.02■□□□□ 0.96
IGKV3D-20A0A0C4DH25 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
IGKV3D-20A0A0C4DH25 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
IGKV3D-20A0A0C4DH25 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IGKV3D-20A0A0C4DH25 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.99■□□□□ 0.95
IGKV3D-20A0A0C4DH25 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
IGKV3D-20A0A0C4DH25 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IGKV3D-20A0A0C4DH25 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IGKV3D-20A0A0C4DH25 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGKV3D-20A0A0C4DH25 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV3D-20A0A0C4DH25 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV3D-20A0A0C4DH25 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV3D-20A0A0C4DH25 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGKV3D-20A0A0C4DH25 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
IGKV3D-20A0A0C4DH25 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
IGKV3D-20A0A0C4DH25 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.92■□□□□ 0.94
IGKV3D-20A0A0C4DH25 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IGKV3D-20A0A0C4DH25 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.9■□□□□ 0.94
IGKV3D-20A0A0C4DH25 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IGKV3D-20A0A0C4DH25 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IGKV3D-20A0A0C4DH25 AC015813.7-201ENST00000623294 581 ntBASIC20.89■□□□□ 0.93
IGKV3D-20A0A0C4DH25 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IGKV3D-20A0A0C4DH25 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IGKV3D-20A0A0C4DH25 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IGKV3D-20A0A0C4DH25 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
IGKV3D-20A0A0C4DH25 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IGKV3D-20A0A0C4DH25 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IGKV3D-20A0A0C4DH25 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
IGKV3D-20A0A0C4DH25 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IGKV3D-20A0A0C4DH25 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IGKV3D-20A0A0C4DH25 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.85■□□□□ 0.93
IGKV3D-20A0A0C4DH25 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
IGKV3D-20A0A0C4DH25 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
IGKV3D-20A0A0C4DH25 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IGKV3D-20A0A0C4DH25 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IGKV3D-20A0A0C4DH25 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
IGKV3D-20A0A0C4DH25 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IGKV3D-20A0A0C4DH25 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
IGKV3D-20A0A0C4DH25 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.78■□□□□ 0.92
IGKV3D-20A0A0C4DH25 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGKV3D-20A0A0C4DH25 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IGKV3D-20A0A0C4DH25 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IGKV3D-20A0A0C4DH25 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IGKV3D-20A0A0C4DH25 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
IGKV3D-20A0A0C4DH25 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
IGKV3D-20A0A0C4DH25 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
IGKV3D-20A0A0C4DH25 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IGKV3D-20A0A0C4DH25 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IGKV3D-20A0A0C4DH25 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.7■□□□□ 0.9
IGKV3D-20A0A0C4DH25 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.7■□□□□ 0.9
IGKV3D-20A0A0C4DH25 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
IGKV3D-20A0A0C4DH25 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.69■□□□□ 0.9
IGKV3D-20A0A0C4DH25 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.69■□□□□ 0.9
IGKV3D-20A0A0C4DH25 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3D-20A0A0C4DH25 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3D-20A0A0C4DH25 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IGKV3D-20A0A0C4DH25 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IGKV3D-20A0A0C4DH25 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IGKV3D-20A0A0C4DH25 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms