Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRTAP3-1Q9BYR8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KRTAP3-1Q9BYR8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRTAP3-1Q9BYR8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRTAP3-1Q9BYR8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
KRTAP3-1Q9BYR8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC14.23□□□□□ -0.13
KRTAP3-1Q9BYR8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRTAP3-1Q9BYR8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRTAP3-1Q9BYR8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC14.21□□□□□ -0.13
KRTAP3-1Q9BYR8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRTAP3-1Q9BYR8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRTAP3-1Q9BYR8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
KRTAP3-1Q9BYR8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KRTAP3-1Q9BYR8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KRTAP3-1Q9BYR8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KRTAP3-1Q9BYR8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRTAP3-1Q9BYR8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC14.17□□□□□ -0.14
KRTAP3-1Q9BYR8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KRTAP3-1Q9BYR8 ABCB10P1-201ENST00000614297 2181 ntBASIC14.16□□□□□ -0.14
KRTAP3-1Q9BYR8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KRTAP3-1Q9BYR8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC14.15□□□□□ -0.14
KRTAP3-1Q9BYR8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC14.15□□□□□ -0.14
KRTAP3-1Q9BYR8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP3-1Q9BYR8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRTAP3-1Q9BYR8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRTAP3-1Q9BYR8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRTAP3-1Q9BYR8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRTAP3-1Q9BYR8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRTAP3-1Q9BYR8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC14.12□□□□□ -0.15
KRTAP3-1Q9BYR8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRTAP3-1Q9BYR8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KRTAP3-1Q9BYR8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
KRTAP3-1Q9BYR8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KRTAP3-1Q9BYR8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRTAP3-1Q9BYR8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
KRTAP3-1Q9BYR8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRTAP3-1Q9BYR8 AC120057.4-201ENST00000624722 1615 ntBASIC14.09□□□□□ -0.15
KRTAP3-1Q9BYR8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KRTAP3-1Q9BYR8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC14.09□□□□□ -0.15
KRTAP3-1Q9BYR8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC14.08□□□□□ -0.16
KRTAP3-1Q9BYR8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRTAP3-1Q9BYR8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRTAP3-1Q9BYR8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
KRTAP3-1Q9BYR8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KRTAP3-1Q9BYR8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRTAP3-1Q9BYR8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRTAP3-1Q9BYR8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC14.06□□□□□ -0.16
KRTAP3-1Q9BYR8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC14.05□□□□□ -0.16
KRTAP3-1Q9BYR8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRTAP3-1Q9BYR8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRTAP3-1Q9BYR8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRTAP3-1Q9BYR8 ABCB10P3-201ENST00000561950 2166 ntBASIC14.05□□□□□ -0.16
KRTAP3-1Q9BYR8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KRTAP3-1Q9BYR8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRTAP3-1Q9BYR8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KRTAP3-1Q9BYR8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP3-1Q9BYR8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
KRTAP3-1Q9BYR8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP3-1Q9BYR8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KRTAP3-1Q9BYR8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KRTAP3-1Q9BYR8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KRTAP3-1Q9BYR8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
KRTAP3-1Q9BYR8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC14.01□□□□□ -0.17
KRTAP3-1Q9BYR8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
KRTAP3-1Q9BYR8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC14□□□□□ -0.17
KRTAP3-1Q9BYR8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
KRTAP3-1Q9BYR8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRTAP3-1Q9BYR8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRTAP3-1Q9BYR8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRTAP3-1Q9BYR8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRTAP3-1Q9BYR8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRTAP3-1Q9BYR8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC13.98□□□□□ -0.17
KRTAP3-1Q9BYR8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC13.98□□□□□ -0.17
KRTAP3-1Q9BYR8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC13.98□□□□□ -0.17
KRTAP3-1Q9BYR8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
KRTAP3-1Q9BYR8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRTAP3-1Q9BYR8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KRTAP3-1Q9BYR8 AC139426.1-201ENST00000568218 2529 ntBASIC13.95□□□□□ -0.18
KRTAP3-1Q9BYR8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KRTAP3-1Q9BYR8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KRTAP3-1Q9BYR8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC13.95□□□□□ -0.18
KRTAP3-1Q9BYR8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
KRTAP3-1Q9BYR8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC13.95□□□□□ -0.18
KRTAP3-1Q9BYR8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KRTAP3-1Q9BYR8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
KRTAP3-1Q9BYR8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRTAP3-1Q9BYR8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRTAP3-1Q9BYR8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC13.93□□□□□ -0.18
KRTAP3-1Q9BYR8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KRTAP3-1Q9BYR8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRTAP3-1Q9BYR8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRTAP3-1Q9BYR8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP3-1Q9BYR8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRTAP3-1Q9BYR8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KRTAP3-1Q9BYR8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
KRTAP3-1Q9BYR8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRTAP3-1Q9BYR8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
KRTAP3-1Q9BYR8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC13.88□□□□□ -0.19
KRTAP3-1Q9BYR8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
KRTAP3-1Q9BYR8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms