Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KRTAP3-1Q9BYR8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
KRTAP3-1Q9BYR8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
KRTAP3-1Q9BYR8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
KRTAP3-1Q9BYR8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC13.86□□□□□ -0.19
KRTAP3-1Q9BYR8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KRTAP3-1Q9BYR8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
KRTAP3-1Q9BYR8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
KRTAP3-1Q9BYR8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRTAP3-1Q9BYR8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
KRTAP3-1Q9BYR8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KRTAP3-1Q9BYR8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
KRTAP3-1Q9BYR8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC13.83□□□□□ -0.2
KRTAP3-1Q9BYR8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KRTAP3-1Q9BYR8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
KRTAP3-1Q9BYR8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
KRTAP3-1Q9BYR8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
KRTAP3-1Q9BYR8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRTAP3-1Q9BYR8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
KRTAP3-1Q9BYR8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRTAP3-1Q9BYR8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC13.8□□□□□ -0.2
KRTAP3-1Q9BYR8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRTAP3-1Q9BYR8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRTAP3-1Q9BYR8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KRTAP3-1Q9BYR8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KRTAP3-1Q9BYR8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KRTAP3-1Q9BYR8 ST7-AS1-201ENST00000456775 1889 ntBASIC13.78□□□□□ -0.2
KRTAP3-1Q9BYR8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KRTAP3-1Q9BYR8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC13.78□□□□□ -0.2
KRTAP3-1Q9BYR8 MVK-208ENST00000539696 608 ntTSL 5 BASIC13.78□□□□□ -0.2
KRTAP3-1Q9BYR8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
KRTAP3-1Q9BYR8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KRTAP3-1Q9BYR8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRTAP3-1Q9BYR8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
KRTAP3-1Q9BYR8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KRTAP3-1Q9BYR8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
KRTAP3-1Q9BYR8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRTAP3-1Q9BYR8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
KRTAP3-1Q9BYR8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
KRTAP3-1Q9BYR8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC13.75□□□□□ -0.21
KRTAP3-1Q9BYR8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRTAP3-1Q9BYR8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRTAP3-1Q9BYR8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC13.74□□□□□ -0.21
KRTAP3-1Q9BYR8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
KRTAP3-1Q9BYR8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
KRTAP3-1Q9BYR8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
KRTAP3-1Q9BYR8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
KRTAP3-1Q9BYR8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC13.74□□□□□ -0.21
KRTAP3-1Q9BYR8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC13.73□□□□□ -0.21
KRTAP3-1Q9BYR8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC13.72□□□□□ -0.21
KRTAP3-1Q9BYR8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP3-1Q9BYR8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP3-1Q9BYR8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KRTAP3-1Q9BYR8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
KRTAP3-1Q9BYR8 AL161658.1-201ENST00000623641 1967 ntBASIC13.71□□□□□ -0.21
KRTAP3-1Q9BYR8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KRTAP3-1Q9BYR8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
KRTAP3-1Q9BYR8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
KRTAP3-1Q9BYR8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRTAP3-1Q9BYR8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
KRTAP3-1Q9BYR8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC13.7□□□□□ -0.22
KRTAP3-1Q9BYR8 AC006077.2-201ENST00000623591 457 ntBASIC13.7□□□□□ -0.22
KRTAP3-1Q9BYR8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC13.69□□□□□ -0.22
KRTAP3-1Q9BYR8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC13.69□□□□□ -0.22
KRTAP3-1Q9BYR8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC13.69□□□□□ -0.22
KRTAP3-1Q9BYR8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP3-1Q9BYR8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP3-1Q9BYR8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP3-1Q9BYR8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP3-1Q9BYR8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP3-1Q9BYR8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC13.67□□□□□ -0.22
KRTAP3-1Q9BYR8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
KRTAP3-1Q9BYR8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP3-1Q9BYR8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP3-1Q9BYR8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP3-1Q9BYR8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRTAP3-1Q9BYR8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
KRTAP3-1Q9BYR8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRTAP3-1Q9BYR8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
KRTAP3-1Q9BYR8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KRTAP3-1Q9BYR8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC13.64□□□□□ -0.23
KRTAP3-1Q9BYR8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
KRTAP3-1Q9BYR8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-1Q9BYR8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-1Q9BYR8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-1Q9BYR8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-1Q9BYR8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-1Q9BYR8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KRTAP3-1Q9BYR8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-1Q9BYR8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-1Q9BYR8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-1Q9BYR8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-1Q9BYR8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-1Q9BYR8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-1Q9BYR8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-1Q9BYR8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KRTAP3-1Q9BYR8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC13.62□□□□□ -0.23
KRTAP3-1Q9BYR8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC13.62□□□□□ -0.23
KRTAP3-1Q9BYR8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRTAP3-1Q9BYR8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms