RNA–Protein interactions for RNA: ENST00000581694.1

GATA6-202, Transcript of GATA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATA6, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA6-202ENST00000581694 NISCHQ9Y2I1 1504 aa61.49■■■■■ 7.43
GATA6-202ENST00000581694 CCDC180Q9P1Z9 1646 aa53.43■■■■■ 6.14
GATA6-202ENST00000581694 ZCCHC6Q5VYS8 1495 aaKnown RBP51.73■■■■■ 5.87
GATA6-202ENST00000581694 DCAF1Q9Y4B6 1507 aa50.79■■■■■ 5.72
GATA6-202ENST00000581694 DCAF8L2P0C7V8 631 aa50.72■■■■■ 5.71
GATA6-202ENST00000581694 SHROOM4Q9ULL8 1493 aa50.47■■■■■ 5.67
GATA6-202ENST00000581694 ABCC9O60706 1549 aa50.32■■■■■ 5.65
GATA6-202ENST00000581694 MYO15BQ96JP2 1530 aa50.05■■■■■ 5.6
GATA6-202ENST00000581694 NACADO15069 1562 aa49.68■■■■■ 5.54
GATA6-202ENST00000581694 SCRIBQ14160 1630 aa49.27■■■■■ 5.48
GATA6-202ENST00000581694 RB1CC1Q8TDY2 1594 aa49.19■■■■■ 5.46
GATA6-202ENST00000581694 SUPT5HO00267 1087 aaKnown RBP48.68■■■■■ 5.38
GATA6-202ENST00000581694 UNC13AQ9UPW8 1703 aa48.32■■■■■ 5.33
GATA6-202ENST00000581694 RSF1Q96T23 1441 aaPredicted RBP47.84■■■■■ 5.25
GATA6-202ENST00000581694 CECR2Q9BXF3 1484 aa47.81■■■■■ 5.24
GATA6-202ENST00000581694 BICRAQ9NZM4 1560 aa47.78■■■■■ 5.24
GATA6-202ENST00000581694 MROH2BQ7Z745 1585 aa47.56■■■■■ 5.2
GATA6-202ENST00000581694 PABPN1Q86U42 306 aaKnown RBP eCLIP47.53■■■■■ 5.2
GATA6-202ENST00000581694 BAZ1AQ9NRL2 1556 aaPredicted RBP47.43■■■■■ 5.18
GATA6-202ENST00000581694 SMARCA4P51532 1647 aa47.22■■■■■ 5.15
GATA6-202ENST00000581694 WIZO95785 1651 aa47.21■■■■■ 5.15
GATA6-202ENST00000581694 CHIC1Q5VXU3 224 aa46.75■■■■■ 5.08
GATA6-202ENST00000581694 TOP2AP11388 1531 aaKnown RBP46.66■■■■■ 5.06
GATA6-202ENST00000581694 PEG3Q9GZU2 1588 aa46.6■■■■■ 5.05
GATA6-202ENST00000581694 ATAD2BQ9ULI0 1458 aa46.35■■■■■ 5.01
GATA6-202ENST00000581694 SMARCA2P51531 1590 aa46.3■■■■■ 5
GATA6-202ENST00000581694 EIF4G1Q04637 1599 aaKnown RBP46.29■■■■■ 5
GATA6-202ENST00000581694 CCDC88BA6NC98 1476 aa46.22■■■■■ 4.99
GATA6-202ENST00000581694 BAZ1BQ9UIG0 1483 aaKnown RBP46.1■■■■■ 4.97
GATA6-202ENST00000581694 NCAPD3P42695 1498 aa45.87■■■■■ 4.93
GATA6-202ENST00000581694 HMGXB3Q12766 1538 aa45.84■■■■■ 4.93
GATA6-202ENST00000581694 TRIM41Q8WV44 630 aa45.7■■■■■ 4.91
GATA6-202ENST00000581694 CC2D2AQ9P2K1 1620 aa45.54■■■■■ 4.88
GATA6-202ENST00000581694 ABCC8Q09428 1581 aa45.4■■■■■ 4.86
GATA6-202ENST00000581694 LOC105371045A0A1W2PR82 267 aa45.02■■■■■ 4.8
GATA6-202ENST00000581694 WRNQ14191 1432 aaPredicted RBP eCLIP45.01■■■■■ 4.8
GATA6-202ENST00000581694 CFTRP13569 1480 aa44.96■■■■■ 4.79
GATA6-202ENST00000581694 FAM9AQ8IZU1 332 aaPredicted RBP44.94■■■■■ 4.78
GATA6-202ENST00000581694 SYNJ1O43426 1573 aa44.86■■■■■ 4.77
GATA6-202ENST00000581694 PRDM2Q13029 1718 aa44.76■■■■■ 4.76
GATA6-202ENST00000581694 CADPSQ9ULU8 1353 aa44.73■■■■■ 4.75
GATA6-202ENST00000581694 TOP2BQ02880 1626 aa44.61■■■■■ 4.73
GATA6-202ENST00000581694 SOGA1O94964 1423 aa44.6■■■■■ 4.73
GATA6-202ENST00000581694 BIVM-ERCC5R4GMW8 1640 aa44.56■■■■■ 4.72
GATA6-202ENST00000581694 EEA1Q15075 1411 aa44.47■■■■■ 4.71
GATA6-202ENST00000581694 CUX1P39880 1505 aa44.44■■■■■ 4.71
GATA6-202ENST00000581694 RUSC2Q8N2Y8 1516 aa44.43■■■■■ 4.7
GATA6-202ENST00000581694 DNAJC5BQ9UF47 199 aa44.38■■■■■ 4.7
GATA6-202ENST00000581694 EHMT2Q96KQ7 1210 aa44.34■■■■■ 4.69
GATA6-202ENST00000581694 NESP48681 1621 aa44.31■■■■■ 4.68
GATA6-202ENST00000581694 LAMC3Q9Y6N6 1575 aa44.26■■■■■ 4.68
GATA6-202ENST00000581694 FANCD2Q9BXW9 1451 aa44.25■■■■■ 4.67
GATA6-202ENST00000581694 CSRNP3Q8WYN3 585 aa44.24■■■■■ 4.67
GATA6-202ENST00000581694 CEP164Q9UPV0 1460 aa43.93■■■■■ 4.62
GATA6-202ENST00000581694 KIF21BO75037 1637 aa43.93■■■■■ 4.62
GATA6-202ENST00000581694 GOLGA3Q08378 1498 aa43.91■■■■■ 4.62
GATA6-202ENST00000581694 DNMBPQ6XZF7 1577 aa43.91■■■■■ 4.62
GATA6-202ENST00000581694 FGD5Q6ZNL6 1462 aa43.9■■■■■ 4.62
GATA6-202ENST00000581694 PDS5BQ9NTI5 1447 aa43.89■■■■■ 4.62
GATA6-202ENST00000581694 TNIKQ9UKE5 1360 aa43.83■■■■■ 4.61
GATA6-202ENST00000581694 TOPBP1Q92547 1522 aa43.83■■■■■ 4.61
GATA6-202ENST00000581694 KIF27Q86VH2 1401 aa43.82■■■■■ 4.6
GATA6-202ENST00000581694 KIF21AQ7Z4S6 1674 aa43.77■■■■■ 4.6
GATA6-202ENST00000581694 UBTFP17480 764 aaKnown RBP43.72■■■■■ 4.59
GATA6-202ENST00000581694 URB2Q14146 1524 aaKnown RBP43.71■■■■■ 4.59
GATA6-202ENST00000581694 RAPGEF2Q9Y4G8 1499 aa43.67■■■■■ 4.58
GATA6-202ENST00000581694 CUX2O14529 1486 aa43.67■■■■■ 4.58
GATA6-202ENST00000581694 CEP162Q5TB80 1403 aa43.66■■■■■ 4.58
GATA6-202ENST00000581694 POLA1P09884 1462 aaPredicted RBP43.65■■■■■ 4.58
GATA6-202ENST00000581694 PRXQ9BXM0 1461 aa43.63■■■■■ 4.58
GATA6-202ENST00000581694 ERICH3Q5RHP9 1530 aa43.56■■■■■ 4.56
GATA6-202ENST00000581694 RAD54L2Q9Y4B4 1467 aa43.53■■■■■ 4.56
GATA6-202ENST00000581694 ABCA10Q8WWZ4 1543 aa43.49■■■■■ 4.55
GATA6-202ENST00000581694 IGF1RP08069 1367 aa43.42■■■■■ 4.54
GATA6-202ENST00000581694 WDR97A6NE52 1622 aa43.36■■■■■ 4.53
GATA6-202ENST00000581694 MRC2Q9UBG0 1479 aa43.33■■■■■ 4.53
GATA6-202ENST00000581694 PCGF6Q9BYE7 350 aa43.26■■■■■ 4.52
GATA6-202ENST00000581694 CLIP1P30622 1438 aa43.24■■■■■ 4.51
GATA6-202ENST00000581694 CARMIL1Q5VZK9 1371 aa43.2■■■■■ 4.51
GATA6-202ENST00000581694 TARBP1Q13395 1621 aaKnown RBP43.15■■■■■ 4.5
GATA6-202ENST00000581694 ABCA5Q8WWZ7 1642 aa43.14■■■■■ 4.5
GATA6-202ENST00000581694 TRIM26Q12899 539 aaPredicted RBP43.13■■■■■ 4.49
GATA6-202ENST00000581694 WDR62O43379 1518 aa43.11■■■■■ 4.49
GATA6-202ENST00000581694 ERCC6Q03468 1493 aa43.08■■■■■ 4.49
GATA6-202ENST00000581694 TDRD9Q8NDG6 1382 aaKnown RBP43.06■■■■■ 4.48
GATA6-202ENST00000581694 CUL7Q14999 1698 aa43.04■■■■■ 4.48
GATA6-202ENST00000581694 GAPVD1Q14C86 1478 aa43.01■■■■■ 4.48
GATA6-202ENST00000581694 RANGAP1P46060 587 aaPredicted RBP42.98■■■■■ 4.47
GATA6-202ENST00000581694 THOC2Q8NI27 1593 aaKnown RBP42.94■■■■■ 4.46
GATA6-202ENST00000581694 PPARGC1BQ86YN6 1023 aaKnown RBP42.91■■■■■ 4.46
GATA6-202ENST00000581694 VPS8Q8N3P4 1428 aa42.9■■■■■ 4.46
GATA6-202ENST00000581694 IFT140Q96RY7 1462 aa42.84■■■■■ 4.45
GATA6-202ENST00000581694 ARAP1Q96P48 1450 aa42.8■■■■■ 4.44
GATA6-202ENST00000581694 PBRM1Q86U86 1689 aa42.78■■■■■ 4.44
GATA6-202ENST00000581694 AQRO60306 1485 aaKnown RBP eCLIP42.74■■■■■ 4.43
GATA6-202ENST00000581694 ARHGAP35Q9NRY4 1499 aa42.74■■■■■ 4.43
GATA6-202ENST00000581694 ZNF608Q9ULD9 1512 aaPredicted RBP42.68■■■■■ 4.42
GATA6-202ENST00000581694 CTTNBP2Q8WZ74 1663 aa42.65■■■■■ 4.42
GATA6-202ENST00000581694 GRIN2BQ13224 1484 aa42.6■■■■■ 4.41
GATA6-202ENST00000581694 ADAMTS12P58397 1594 aa42.55■■■■■ 4.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms