Protein–RNA interactions for Protein: A0A0K0K1E9

TRBV7-7, T-cell receptor beta variable 7-7 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-7A0A0K0K1E9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
TRBV7-7A0A0K0K1E9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRBV7-7A0A0K0K1E9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TRBV7-7A0A0K0K1E9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV7-7A0A0K0K1E9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV7-7A0A0K0K1E9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV7-7A0A0K0K1E9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.15■□□□□ 0.98
TRBV7-7A0A0K0K1E9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV7-7A0A0K0K1E9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TRBV7-7A0A0K0K1E9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC20.8■□□□□ 0.92
TRBV7-7A0A0K0K1E9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV7-7A0A0K0K1E9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV7-7A0A0K0K1E9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV7-7A0A0K0K1E9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRBV7-7A0A0K0K1E9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV7-7A0A0K0K1E9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV7-7A0A0K0K1E9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC20.11■□□□□ 0.81
TRBV7-7A0A0K0K1E9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV7-7A0A0K0K1E9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV7-7A0A0K0K1E9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV7-7A0A0K0K1E9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV7-7A0A0K0K1E9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV7-7A0A0K0K1E9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV7-7A0A0K0K1E9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRBV7-7A0A0K0K1E9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRBV7-7A0A0K0K1E9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRBV7-7A0A0K0K1E9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV7-7A0A0K0K1E9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV7-7A0A0K0K1E9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
TRBV7-7A0A0K0K1E9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBV7-7A0A0K0K1E9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBV7-7A0A0K0K1E9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV7-7A0A0K0K1E9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
TRBV7-7A0A0K0K1E9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBV7-7A0A0K0K1E9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV7-7A0A0K0K1E9 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
TRBV7-7A0A0K0K1E9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV7-7A0A0K0K1E9 AL161658.1-201ENST00000623641 1967 ntBASIC19.46■□□□□ 0.71
TRBV7-7A0A0K0K1E9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV7-7A0A0K0K1E9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRBV7-7A0A0K0K1E9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV7-7A0A0K0K1E9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRBV7-7A0A0K0K1E9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV7-7A0A0K0K1E9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV7-7A0A0K0K1E9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV7-7A0A0K0K1E9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV7-7A0A0K0K1E9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.3■□□□□ 0.68
TRBV7-7A0A0K0K1E9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRBV7-7A0A0K0K1E9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRBV7-7A0A0K0K1E9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV7-7A0A0K0K1E9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV7-7A0A0K0K1E9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV7-7A0A0K0K1E9 AL356512.1-201ENST00000607453 1739 ntBASIC19.17■□□□□ 0.66
TRBV7-7A0A0K0K1E9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV7-7A0A0K0K1E9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV7-7A0A0K0K1E9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV7-7A0A0K0K1E9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV7-7A0A0K0K1E9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV7-7A0A0K0K1E9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV7-7A0A0K0K1E9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV7-7A0A0K0K1E9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV7-7A0A0K0K1E9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV7-7A0A0K0K1E9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV7-7A0A0K0K1E9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRBV7-7A0A0K0K1E9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV7-7A0A0K0K1E9 AC139426.1-201ENST00000568218 2529 ntBASIC18.99■□□□□ 0.63
TRBV7-7A0A0K0K1E9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV7-7A0A0K0K1E9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV7-7A0A0K0K1E9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV7-7A0A0K0K1E9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV7-7A0A0K0K1E9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV7-7A0A0K0K1E9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV7-7A0A0K0K1E9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
TRBV7-7A0A0K0K1E9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV7-7A0A0K0K1E9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV7-7A0A0K0K1E9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV7-7A0A0K0K1E9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRBV7-7A0A0K0K1E9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV7-7A0A0K0K1E9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV7-7A0A0K0K1E9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV7-7A0A0K0K1E9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV7-7A0A0K0K1E9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRBV7-7A0A0K0K1E9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV7-7A0A0K0K1E9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV7-7A0A0K0K1E9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRBV7-7A0A0K0K1E9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV7-7A0A0K0K1E9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV7-7A0A0K0K1E9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV7-7A0A0K0K1E9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV7-7A0A0K0K1E9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV7-7A0A0K0K1E9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV7-7A0A0K0K1E9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV7-7A0A0K0K1E9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV7-7A0A0K0K1E9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV7-7A0A0K0K1E9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV7-7A0A0K0K1E9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV7-7A0A0K0K1E9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV7-7A0A0K0K1E9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV7-7A0A0K0K1E9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV7-7A0A0K0K1E9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms