RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 NISCHQ9Y2I1 1504 aa80.09■■■■■ 10.41
PPP1CA-203ENST00000376745 CCDC180Q9P1Z9 1646 aa70.98■■■■■ 8.95
PPP1CA-203ENST00000376745 ABCC9O60706 1549 aa69.11■■■■■ 8.65
PPP1CA-203ENST00000376745 ZCCHC6Q5VYS8 1495 aaKnown RBP66.79■■■■■ 8.28
PPP1CA-203ENST00000376745 NACADO15069 1562 aa66.69■■■■■ 8.27
PPP1CA-203ENST00000376745 DCAF8L2P0C7V8 631 aa66.68■■■■■ 8.26
PPP1CA-203ENST00000376745 RB1CC1Q8TDY2 1594 aa66.64■■■■■ 8.26
PPP1CA-203ENST00000376745 MYO15BQ96JP2 1530 aa66.47■■■■■ 8.23
PPP1CA-203ENST00000376745 DCAF1Q9Y4B6 1507 aa66.31■■■■■ 8.21
PPP1CA-203ENST00000376745 UNC13AQ9UPW8 1703 aa65.11■■■■■ 8.01
PPP1CA-203ENST00000376745 SCRIBQ14160 1630 aa64.77■■■■■ 7.96
PPP1CA-203ENST00000376745 PABPN1Q86U42 306 aaKnown RBP eCLIP64.67■■■■■ 7.94
PPP1CA-203ENST00000376745 BICRAQ9NZM4 1560 aa64.67■■■■■ 7.94
PPP1CA-203ENST00000376745 SHROOM4Q9ULL8 1493 aa64.01■■■■■ 7.84
PPP1CA-203ENST00000376745 DNAJC5BQ9UF47 199 aa63.21■■■■■ 7.71
PPP1CA-203ENST00000376745 EIF4G1Q04637 1599 aaKnown RBP62.9■■■■■ 7.66
PPP1CA-203ENST00000376745 CC2D2AQ9P2K1 1620 aa62.55■■■■■ 7.6
PPP1CA-203ENST00000376745 CECR2Q9BXF3 1484 aa62.36■■■■■ 7.57
PPP1CA-203ENST00000376745 SMARCA4P51532 1647 aa62.02■■■■■ 7.52
PPP1CA-203ENST00000376745 BAZ1AQ9NRL2 1556 aaPredicted RBP62.02■■■■■ 7.52
PPP1CA-203ENST00000376745 MROH2BQ7Z745 1585 aa61.73■■■■■ 7.47
PPP1CA-203ENST00000376745 ATAD2BQ9ULI0 1458 aa61.65■■■■■ 7.46
PPP1CA-203ENST00000376745 NCAPD3P42695 1498 aa61.58■■■■■ 7.45
PPP1CA-203ENST00000376745 SMARCA2P51531 1590 aa61.54■■■■■ 7.44
PPP1CA-203ENST00000376745 PEG3Q9GZU2 1588 aa61.47■■■■■ 7.43
PPP1CA-203ENST00000376745 HMGXB3Q12766 1538 aa61.26■■■■■ 7.4
PPP1CA-203ENST00000376745 RSF1Q96T23 1441 aaPredicted RBP61.18■■■■■ 7.38
PPP1CA-203ENST00000376745 BAZ1BQ9UIG0 1483 aaKnown RBP61.11■■■■■ 7.37
PPP1CA-203ENST00000376745 WIZO95785 1651 aa61.04■■■■■ 7.36
PPP1CA-203ENST00000376745 TOP2AP11388 1531 aaKnown RBP60.43■■■■■ 7.26
PPP1CA-203ENST00000376745 NESP48681 1621 aa59.94■■■■■ 7.19
PPP1CA-203ENST00000376745 LAMC3Q9Y6N6 1575 aa59.83■■■■■ 7.17
PPP1CA-203ENST00000376745 SUPT5HO00267 1087 aaKnown RBP59.83■■■■■ 7.17
PPP1CA-203ENST00000376745 CADPSQ9ULU8 1353 aa59.79■■■■■ 7.16
PPP1CA-203ENST00000376745 CCDC88BA6NC98 1476 aa59.75■■■■■ 7.15
PPP1CA-203ENST00000376745 CFTRP13569 1480 aa59.52■■■■■ 7.12
PPP1CA-203ENST00000376745 ERCC6Q03468 1493 aa59.5■■■■■ 7.12
PPP1CA-203ENST00000376745 PDS5BQ9NTI5 1447 aa59.43■■■■■ 7.1
PPP1CA-203ENST00000376745 KIF21AQ7Z4S6 1674 aa59.19■■■■■ 7.07
PPP1CA-203ENST00000376745 FANCD2Q9BXW9 1451 aa59.07■■■■■ 7.05
PPP1CA-203ENST00000376745 PRDM2Q13029 1718 aa58.98■■■■■ 7.03
PPP1CA-203ENST00000376745 THOC2Q8NI27 1593 aaKnown RBP58.94■■■■■ 7.03
PPP1CA-203ENST00000376745 CEP164Q9UPV0 1460 aa58.93■■■■■ 7.02
PPP1CA-203ENST00000376745 CUX2O14529 1486 aa58.8■■■■■ 7
PPP1CA-203ENST00000376745 MRC2Q9UBG0 1479 aa58.78■■■■■ 7
PPP1CA-203ENST00000376745 WDR62O43379 1518 aa58.6■■■■■ 6.97
PPP1CA-203ENST00000376745 URB2Q14146 1524 aaKnown RBP58.47■■■■■ 6.95
PPP1CA-203ENST00000376745 ABCC8Q09428 1581 aa58.18■■■■■ 6.9
PPP1CA-203ENST00000376745 TOPBP1Q92547 1522 aa58.17■■■■■ 6.9
PPP1CA-203ENST00000376745 DNMBPQ6XZF7 1577 aa58.11■■■■■ 6.89
PPP1CA-203ENST00000376745 CUX1P39880 1505 aa57.88■■■■■ 6.86
PPP1CA-203ENST00000376745 POLA1P09884 1462 aaPredicted RBP57.71■■■■■ 6.83
PPP1CA-203ENST00000376745 IFT140Q96RY7 1462 aa57.71■■■■■ 6.83
PPP1CA-203ENST00000376745 WRNQ14191 1432 aaPredicted RBP eCLIP57.64■■■■■ 6.82
PPP1CA-203ENST00000376745 FGD5Q6ZNL6 1462 aa57.61■■■■■ 6.81
PPP1CA-203ENST00000376745 TARBP1Q13395 1621 aaKnown RBP57.51■■■■■ 6.8
PPP1CA-203ENST00000376745 SOGA1O94964 1423 aa57.47■■■■■ 6.79
PPP1CA-203ENST00000376745 SYNJ1O43426 1573 aa57.46■■■■■ 6.79
PPP1CA-203ENST00000376745 TOP2BQ02880 1626 aa57.46■■■■■ 6.79
PPP1CA-203ENST00000376745 RAD54L2Q9Y4B4 1467 aa57.45■■■■■ 6.79
PPP1CA-203ENST00000376745 ZNF608Q9ULD9 1512 aaPredicted RBP57.43■■■■■ 6.78
PPP1CA-203ENST00000376745 BIVM-ERCC5R4GMW8 1640 aa57.43■■■■■ 6.78
PPP1CA-203ENST00000376745 EIF4G3O43432 1585 aaKnown RBP57.17■■■■■ 6.74
PPP1CA-203ENST00000376745 AQRO60306 1485 aaKnown RBP eCLIP57.15■■■■■ 6.747e-8■■■■■ 41.6
PPP1CA-203ENST00000376745 TDRD9Q8NDG6 1382 aaKnown RBP57.11■■■■■ 6.73
PPP1CA-203ENST00000376745 ABCA10Q8WWZ4 1543 aa57.1■■■■■ 6.73
PPP1CA-203ENST00000376745 WDR97A6NE52 1622 aa57.09■■■■■ 6.73
PPP1CA-203ENST00000376745 GAPVD1Q14C86 1478 aa56.81■■■■■ 6.68
PPP1CA-203ENST00000376745 ABCA5Q8WWZ7 1642 aa56.81■■■■■ 6.68
PPP1CA-203ENST00000376745 GRIN2BQ13224 1484 aa56.75■■■■■ 6.68
PPP1CA-203ENST00000376745 DNAJC5Q9H3Z4 198 aa56.62■■■■■ 6.65
PPP1CA-203ENST00000376745 SNAPC4Q5SXM2 1469 aa56.6■■■■■ 6.65
PPP1CA-203ENST00000376745 PBRM1Q86U86 1689 aa56.59■■■■■ 6.65
PPP1CA-203ENST00000376745 MAGI1Q96QZ7 1491 aaPredicted RBP56.56■■■■■ 6.65
PPP1CA-203ENST00000376745 TRIM41Q8WV44 630 aa56.51■■■■■ 6.64
PPP1CA-203ENST00000376745 OSCARQ8IYS5 282 aa56.45■■■■■ 6.63
PPP1CA-203ENST00000376745 ERICH3Q5RHP9 1530 aa56.41■■■■■ 6.62
PPP1CA-203ENST00000376745 KIF27Q86VH2 1401 aa56.4■■■■■ 6.62
PPP1CA-203ENST00000376745 CHD1O14646 1710 aa56.35■■■■■ 6.61
PPP1CA-203ENST00000376745 FBLN2P98095 1184 aa56.34■■■■■ 6.61
PPP1CA-203ENST00000376745 SYNJ2O15056 1496 aa56.34■■■■■ 6.61
PPP1CA-203ENST00000376745 CHMP7Q8WUX9 453 aaPredicted RBP56.27■■■■■ 6.6
PPP1CA-203ENST00000376745 ADAMTS12P58397 1594 aa56.22■■■■■ 6.59
PPP1CA-203ENST00000376745 IGF1RP08069 1367 aa56.19■■■■■ 6.59
PPP1CA-203ENST00000376745 FHAD1B1AJZ9 1412 aa56.17■■■■■ 6.58
PPP1CA-203ENST00000376745 CHIC1Q5VXU3 224 aa56.12■■■■■ 6.57
PPP1CA-203ENST00000376745 GRIN2AQ12879 1464 aa56.03■■■■■ 6.56
PPP1CA-203ENST00000376745 RUSC2Q8N2Y8 1516 aa56.02■■■■■ 6.56
PPP1CA-203ENST00000376745 CUL7Q14999 1698 aa55.91■■■■■ 6.54
PPP1CA-203ENST00000376745 CLASP1Q7Z460 1538 aa55.82■■■■■ 6.53
PPP1CA-203ENST00000376745 CARMIL1Q5VZK9 1371 aa55.82■■■■■ 6.53
PPP1CA-203ENST00000376745 NUP160Q12769 1436 aa55.8■■■■■ 6.52
PPP1CA-203ENST00000376745 CEP170Q5SW79 1584 aa55.71■■■■■ 6.51
PPP1CA-203ENST00000376745 EEA1Q15075 1411 aa55.55■■■■■ 6.48
PPP1CA-203ENST00000376745 ARHGEF11O15085 1522 aa55.52■■■■■ 6.48
PPP1CA-203ENST00000376745 RAPGEF2Q9Y4G8 1499 aa55.52■■■■■ 6.48
PPP1CA-203ENST00000376745 CSRNP3Q8WYN3 585 aa55.46■■■■■ 6.47
PPP1CA-203ENST00000376745 RIMBP3CA6NJZ7 1639 aa55.45■■■■■ 6.47
PPP1CA-203ENST00000376745 RIMBP3BA6NNM3 1639 aa55.45■■■■■ 6.47
PPP1CA-203ENST00000376745 RIMBP3Q9UFD9 1639 aa55.45■■■■■ 6.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms