Protein–RNA interactions for Protein: S4R3F8

Uncharacterized protein, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3F8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC13.35□□□□□ -0.27
S4R3F8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S4R3F8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
S4R3F8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
S4R3F8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
S4R3F8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
S4R3F8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S4R3F8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S4R3F8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S4R3F8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
S4R3F8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
S4R3F8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
S4R3F8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
S4R3F8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
S4R3F8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC13.33□□□□□ -0.28
S4R3F8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
S4R3F8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
S4R3F8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
S4R3F8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
S4R3F8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
S4R3F8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
S4R3F8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
S4R3F8 AL161658.1-201ENST00000623641 1967 ntBASIC13.31□□□□□ -0.28
S4R3F8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC13.31□□□□□ -0.28
S4R3F8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
S4R3F8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
S4R3F8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
S4R3F8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
S4R3F8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S4R3F8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
S4R3F8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
S4R3F8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
S4R3F8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
S4R3F8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
S4R3F8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
S4R3F8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
S4R3F8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
S4R3F8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
S4R3F8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
S4R3F8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
S4R3F8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
S4R3F8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S4R3F8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
S4R3F8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S4R3F8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S4R3F8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S4R3F8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
S4R3F8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
S4R3F8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
S4R3F8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
S4R3F8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC13.27□□□□□ -0.28
S4R3F8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
S4R3F8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
S4R3F8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
S4R3F8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
S4R3F8 AL031258.1-201ENST00000623562 325 ntBASIC13.25□□□□□ -0.29
S4R3F8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC13.25□□□□□ -0.29
S4R3F8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
S4R3F8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
S4R3F8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
S4R3F8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC13.24□□□□□ -0.29
S4R3F8 ST7-AS1-201ENST00000456775 1889 ntBASIC13.24□□□□□ -0.29
S4R3F8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
S4R3F8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC13.24□□□□□ -0.29
S4R3F8 AP002365.1-201ENST00000603448 772 ntBASIC13.23□□□□□ -0.29
S4R3F8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
S4R3F8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
S4R3F8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
S4R3F8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC13.22□□□□□ -0.29
S4R3F8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
S4R3F8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
S4R3F8 AC139426.1-201ENST00000568218 2529 ntBASIC13.21□□□□□ -0.29
S4R3F8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
S4R3F8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
S4R3F8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
S4R3F8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
S4R3F8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
S4R3F8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC13.2□□□□□ -0.3
S4R3F8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC13.19□□□□□ -0.3
S4R3F8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
S4R3F8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
S4R3F8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
S4R3F8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
S4R3F8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
S4R3F8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
S4R3F8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
S4R3F8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
S4R3F8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
S4R3F8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
S4R3F8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
S4R3F8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
S4R3F8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC13.16□□□□□ -0.3
S4R3F8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
S4R3F8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
S4R3F8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
S4R3F8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
S4R3F8 AL135925.1-201ENST00000605920 1701 ntBASIC13.16□□□□□ -0.3
S4R3F8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
S4R3F8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
S4R3F8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms