Protein–RNA interactions for Protein: Q8NG66

NEK11, Serine/threonine-protein kinase Nek11, humanhuman

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11Q8NG66 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
NEK11Q8NG66 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
NEK11Q8NG66 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
NEK11Q8NG66 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
NEK11Q8NG66 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
NEK11Q8NG66 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
NEK11Q8NG66 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.02■■■□□ 2.24
NEK11Q8NG66 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
NEK11Q8NG66 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
NEK11Q8NG66 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
NEK11Q8NG66 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
NEK11Q8NG66 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
NEK11Q8NG66 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29■■■□□ 2.23
NEK11Q8NG66 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
NEK11Q8NG66 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
NEK11Q8NG66 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
NEK11Q8NG66 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
NEK11Q8NG66 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.97■■■□□ 2.23
NEK11Q8NG66 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
NEK11Q8NG66 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
NEK11Q8NG66 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
NEK11Q8NG66 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.96■■■□□ 2.23
NEK11Q8NG66 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
NEK11Q8NG66 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
NEK11Q8NG66 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.93■■■□□ 2.22
NEK11Q8NG66 WASH5P-204ENST00000632292 975 ntBASIC28.93■■■□□ 2.22
NEK11Q8NG66 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
NEK11Q8NG66 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
NEK11Q8NG66 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
NEK11Q8NG66 AL135925.1-201ENST00000605920 1701 ntBASIC28.91■■■□□ 2.22
NEK11Q8NG66 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
NEK11Q8NG66 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.91■■■□□ 2.22
NEK11Q8NG66 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
NEK11Q8NG66 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
NEK11Q8NG66 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
NEK11Q8NG66 AL133380.1-201ENST00000506013 324 ntBASIC28.89■■■□□ 2.22
NEK11Q8NG66 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
NEK11Q8NG66 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.85■■■□□ 2.21
NEK11Q8NG66 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
NEK11Q8NG66 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.84■■■□□ 2.21
NEK11Q8NG66 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.84■■■□□ 2.21
NEK11Q8NG66 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
NEK11Q8NG66 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
NEK11Q8NG66 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.8■■■□□ 2.2
NEK11Q8NG66 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.8■■■□□ 2.2
NEK11Q8NG66 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
NEK11Q8NG66 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
NEK11Q8NG66 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
NEK11Q8NG66 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
NEK11Q8NG66 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
NEK11Q8NG66 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
NEK11Q8NG66 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
NEK11Q8NG66 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
NEK11Q8NG66 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.76■■■□□ 2.19
NEK11Q8NG66 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
NEK11Q8NG66 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
NEK11Q8NG66 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
NEK11Q8NG66 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
NEK11Q8NG66 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
NEK11Q8NG66 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
NEK11Q8NG66 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.73■■■□□ 2.19
NEK11Q8NG66 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
NEK11Q8NG66 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
NEK11Q8NG66 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
NEK11Q8NG66 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
NEK11Q8NG66 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
NEK11Q8NG66 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.71■■■□□ 2.19
NEK11Q8NG66 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
NEK11Q8NG66 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
NEK11Q8NG66 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
NEK11Q8NG66 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.7■■■□□ 2.19
NEK11Q8NG66 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
NEK11Q8NG66 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
NEK11Q8NG66 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.68■■■□□ 2.18
NEK11Q8NG66 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.68■■■□□ 2.18
NEK11Q8NG66 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
NEK11Q8NG66 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.68■■■□□ 2.18
NEK11Q8NG66 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
NEK11Q8NG66 RARRES2P7-201ENST00000567349 469 ntBASIC28.66■■■□□ 2.18
NEK11Q8NG66 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NEK11Q8NG66 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NEK11Q8NG66 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NEK11Q8NG66 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.63■■■□□ 2.17
NEK11Q8NG66 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
NEK11Q8NG66 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
NEK11Q8NG66 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
NEK11Q8NG66 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
NEK11Q8NG66 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NEK11Q8NG66 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NEK11Q8NG66 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NEK11Q8NG66 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
NEK11Q8NG66 SETD8P1-201ENST00000623146 1180 ntBASIC28.59■■■□□ 2.17
NEK11Q8NG66 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
NEK11Q8NG66 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
NEK11Q8NG66 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
NEK11Q8NG66 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
NEK11Q8NG66 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
NEK11Q8NG66 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
NEK11Q8NG66 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
NEK11Q8NG66 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms