Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
SMC5Q8IY18 AL135925.1-201ENST00000605920 1701 ntBASIC33.29■■■□□ 2.92
SMC5Q8IY18 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
SMC5Q8IY18 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
SMC5Q8IY18 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
SMC5Q8IY18 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
SMC5Q8IY18 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
SMC5Q8IY18 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.24■■■□□ 2.91
SMC5Q8IY18 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
SMC5Q8IY18 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
SMC5Q8IY18 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SMC5Q8IY18 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC33.22■■■□□ 2.91
SMC5Q8IY18 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
SMC5Q8IY18 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SMC5Q8IY18 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
SMC5Q8IY18 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC33.21■■■□□ 2.91
SMC5Q8IY18 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC33.21■■■□□ 2.91
SMC5Q8IY18 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
SMC5Q8IY18 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
SMC5Q8IY18 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SMC5Q8IY18 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
SMC5Q8IY18 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
SMC5Q8IY18 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
SMC5Q8IY18 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC33.16■■■□□ 2.9
SMC5Q8IY18 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SMC5Q8IY18 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC33.16■■■□□ 2.9
SMC5Q8IY18 RARRES2P7-201ENST00000567349 469 ntBASIC33.16■■■□□ 2.9
SMC5Q8IY18 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SMC5Q8IY18 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SMC5Q8IY18 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC33.15■■■□□ 2.9
SMC5Q8IY18 AC139426.1-201ENST00000568218 2529 ntBASIC33.15■■■□□ 2.9
SMC5Q8IY18 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
SMC5Q8IY18 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
SMC5Q8IY18 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
SMC5Q8IY18 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC33.13■■■□□ 2.89
SMC5Q8IY18 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SMC5Q8IY18 SETD8P1-201ENST00000623146 1180 ntBASIC33.13■■■□□ 2.89
SMC5Q8IY18 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
SMC5Q8IY18 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC33.11■■■□□ 2.89
SMC5Q8IY18 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
SMC5Q8IY18 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
SMC5Q8IY18 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC33.1■■■□□ 2.89
SMC5Q8IY18 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC33.09■■■□□ 2.89
SMC5Q8IY18 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SMC5Q8IY18 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SMC5Q8IY18 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SMC5Q8IY18 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC33.06■■■□□ 2.88
SMC5Q8IY18 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
SMC5Q8IY18 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
SMC5Q8IY18 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
SMC5Q8IY18 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
SMC5Q8IY18 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SMC5Q8IY18 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
SMC5Q8IY18 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SMC5Q8IY18 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC33.03■■■□□ 2.88
SMC5Q8IY18 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC33.03■■■□□ 2.88
SMC5Q8IY18 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SMC5Q8IY18 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
SMC5Q8IY18 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
SMC5Q8IY18 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
SMC5Q8IY18 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC33■■■□□ 2.87
SMC5Q8IY18 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
SMC5Q8IY18 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
SMC5Q8IY18 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
SMC5Q8IY18 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.99■■■□□ 2.87
SMC5Q8IY18 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
SMC5Q8IY18 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
SMC5Q8IY18 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
SMC5Q8IY18 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
SMC5Q8IY18 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.95■■■□□ 2.86
SMC5Q8IY18 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.94■■■□□ 2.86
SMC5Q8IY18 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.94■■■□□ 2.86
SMC5Q8IY18 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SMC5Q8IY18 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
SMC5Q8IY18 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
SMC5Q8IY18 AC136428.2-201ENST00000563187 214 ntBASIC32.91■■■□□ 2.86
SMC5Q8IY18 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SMC5Q8IY18 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
SMC5Q8IY18 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SMC5Q8IY18 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SMC5Q8IY18 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC32.89■■■□□ 2.86
SMC5Q8IY18 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.89■■■□□ 2.86
SMC5Q8IY18 CAHM-201ENST00000604200 896 ntBASIC32.89■■■□□ 2.86
SMC5Q8IY18 AL391121.1-201ENST00000607967 1349 ntBASIC32.88■■■□□ 2.85
SMC5Q8IY18 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
SMC5Q8IY18 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
SMC5Q8IY18 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
SMC5Q8IY18 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.87■■■□□ 2.85
SMC5Q8IY18 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.86■■■□□ 2.85
SMC5Q8IY18 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SMC5Q8IY18 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
SMC5Q8IY18 AC010864.1-201ENST00000609407 1511 ntBASIC32.83■■■□□ 2.85
SMC5Q8IY18 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.82■■■□□ 2.84
SMC5Q8IY18 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.82■■■□□ 2.84
SMC5Q8IY18 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SMC5Q8IY18 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SMC5Q8IY18 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.8■■■□□ 2.84
SMC5Q8IY18 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SMC5Q8IY18 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.8■■■□□ 2.84
SMC5Q8IY18 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 7.1 ms