Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC42.11■■■■■ 4.33
SMC5Q8IY18 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC42.05■■■■■ 4.32
SMC5Q8IY18 AL356512.1-201ENST00000607453 1739 ntBASIC41.35■■■■■ 4.21
SMC5Q8IY18 HES6-203ENST00000409160 1600 ntTSL 2 BASIC41.15■■■■■ 4.18
SMC5Q8IY18 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC41.13■■■■■ 4.17
SMC5Q8IY18 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC41.12■■■■■ 4.17
SMC5Q8IY18 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC40.79■■■■■ 4.12
SMC5Q8IY18 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
SMC5Q8IY18 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.08
SMC5Q8IY18 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC40.29■■■■■ 4.04
SMC5Q8IY18 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC40.24■■■■■ 4.03
SMC5Q8IY18 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC40.12■■■■■ 4.01
SMC5Q8IY18 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC39.68■■■■□ 3.94
SMC5Q8IY18 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
SMC5Q8IY18 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
SMC5Q8IY18 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC39.39■■■■□ 3.9
SMC5Q8IY18 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC39.36■■■■□ 3.89
SMC5Q8IY18 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC39.31■■■■□ 3.88
SMC5Q8IY18 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC39.28■■■■□ 3.88
SMC5Q8IY18 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC39.02■■■■□ 3.84
SMC5Q8IY18 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
SMC5Q8IY18 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC38.79■■■■□ 3.8
SMC5Q8IY18 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC38.77■■■■□ 3.8
SMC5Q8IY18 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC38.7■■■■□ 3.79
SMC5Q8IY18 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC38.61■■■■□ 3.77
SMC5Q8IY18 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC38.59■■■■□ 3.77
SMC5Q8IY18 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
SMC5Q8IY18 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC38.55■■■■□ 3.76
SMC5Q8IY18 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC38.54■■■■□ 3.76
SMC5Q8IY18 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC38.53■■■■□ 3.76
SMC5Q8IY18 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
SMC5Q8IY18 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
SMC5Q8IY18 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC38.32■■■■□ 3.72
SMC5Q8IY18 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC38.26■■■■□ 3.71
SMC5Q8IY18 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC38.22■■■■□ 3.71
SMC5Q8IY18 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
SMC5Q8IY18 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC38.12■■■■□ 3.69
SMC5Q8IY18 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC38.04■■■■□ 3.68
SMC5Q8IY18 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
SMC5Q8IY18 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC37.94■■■■□ 3.66
SMC5Q8IY18 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC37.77■■■■□ 3.64
SMC5Q8IY18 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
SMC5Q8IY18 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC37.62■■■■□ 3.61
SMC5Q8IY18 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC37.58■■■■□ 3.61
SMC5Q8IY18 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
SMC5Q8IY18 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC37.56■■■■□ 3.6
SMC5Q8IY18 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC37.51■■■■□ 3.6
SMC5Q8IY18 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC37.49■■■■□ 3.59
SMC5Q8IY18 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC37.47■■■■□ 3.59
SMC5Q8IY18 ILK-212ENST00000532063 1617 ntTSL 2 BASIC37.28■■■■□ 3.56
SMC5Q8IY18 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
SMC5Q8IY18 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
SMC5Q8IY18 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
SMC5Q8IY18 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC37.12■■■■□ 3.53
SMC5Q8IY18 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC37.09■■■■□ 3.53
SMC5Q8IY18 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
SMC5Q8IY18 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
SMC5Q8IY18 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
SMC5Q8IY18 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC36.95■■■■□ 3.51
SMC5Q8IY18 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
SMC5Q8IY18 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
SMC5Q8IY18 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC36.9■■■■□ 3.5
SMC5Q8IY18 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC36.89■■■■□ 3.5
SMC5Q8IY18 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
SMC5Q8IY18 INO80B-203ENST00000409917 796 ntTSL 2 BASIC36.76■■■■□ 3.48
SMC5Q8IY18 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
SMC5Q8IY18 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
SMC5Q8IY18 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC36.69■■■■□ 3.46
SMC5Q8IY18 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC36.66■■■■□ 3.46
SMC5Q8IY18 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC36.64■■■■□ 3.46
SMC5Q8IY18 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
SMC5Q8IY18 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC36.61■■■■□ 3.45
SMC5Q8IY18 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
SMC5Q8IY18 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
SMC5Q8IY18 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC36.5■■■■□ 3.43
SMC5Q8IY18 AC015813.7-201ENST00000623294 581 ntBASIC36.47■■■■□ 3.43
SMC5Q8IY18 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
SMC5Q8IY18 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
SMC5Q8IY18 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
SMC5Q8IY18 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
SMC5Q8IY18 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
SMC5Q8IY18 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
SMC5Q8IY18 AC145285.7-201ENST00000614819 1539 ntBASIC36.3■■■■□ 3.4
SMC5Q8IY18 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC36.27■■■■□ 3.4
SMC5Q8IY18 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC36.25■■■■□ 3.39
SMC5Q8IY18 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC36.23■■■■□ 3.39
SMC5Q8IY18 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
SMC5Q8IY18 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
SMC5Q8IY18 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC36.15■■■■□ 3.38
SMC5Q8IY18 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC36.14■■■■□ 3.38
SMC5Q8IY18 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC36.12■■■■□ 3.37
SMC5Q8IY18 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
SMC5Q8IY18 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
SMC5Q8IY18 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
SMC5Q8IY18 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
SMC5Q8IY18 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
SMC5Q8IY18 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC36.02■■■■□ 3.36
SMC5Q8IY18 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC36.02■■■■□ 3.36
SMC5Q8IY18 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
SMC5Q8IY18 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms