Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SIRPB1O00241 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.39■■□□□ 1.17
SIRPB1O00241 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SIRPB1O00241 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SIRPB1O00241 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SIRPB1O00241 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.38■■□□□ 1.17
SIRPB1O00241 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SIRPB1O00241 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.38■■□□□ 1.17
SIRPB1O00241 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
SIRPB1O00241 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SIRPB1O00241 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SIRPB1O00241 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SIRPB1O00241 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SIRPB1O00241 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SIRPB1O00241 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
SIRPB1O00241 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SIRPB1O00241 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.36■■□□□ 1.17
SIRPB1O00241 ST7-AS1-201ENST00000456775 1889 ntBASIC22.36■■□□□ 1.17
SIRPB1O00241 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SIRPB1O00241 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SIRPB1O00241 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SIRPB1O00241 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SIRPB1O00241 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.34■■□□□ 1.17
SIRPB1O00241 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SIRPB1O00241 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SIRPB1O00241 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SIRPB1O00241 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.34■■□□□ 1.17
SIRPB1O00241 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SIRPB1O00241 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIRPB1O00241 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIRPB1O00241 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIRPB1O00241 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SIRPB1O00241 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SIRPB1O00241 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SIRPB1O00241 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIRPB1O00241 AL135925.1-201ENST00000605920 1701 ntBASIC22.32■■□□□ 1.16
SIRPB1O00241 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SIRPB1O00241 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SIRPB1O00241 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SIRPB1O00241 ABCB10P3-201ENST00000561950 2166 ntBASIC22.31■■□□□ 1.16
SIRPB1O00241 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SIRPB1O00241 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIRPB1O00241 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.3■■□□□ 1.16
SIRPB1O00241 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SIRPB1O00241 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SIRPB1O00241 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SIRPB1O00241 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SIRPB1O00241 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SIRPB1O00241 AC097358.2-201ENST00000607541 1159 ntBASIC22.28■■□□□ 1.16
SIRPB1O00241 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SIRPB1O00241 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SIRPB1O00241 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SIRPB1O00241 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIRPB1O00241 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIRPB1O00241 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIRPB1O00241 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.26■■□□□ 1.15
SIRPB1O00241 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SIRPB1O00241 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SIRPB1O00241 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIRPB1O00241 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.25■■□□□ 1.15
SIRPB1O00241 AC136428.2-201ENST00000563187 214 ntBASIC22.25■■□□□ 1.15
SIRPB1O00241 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SIRPB1O00241 AC139426.1-201ENST00000568218 2529 ntBASIC22.24■■□□□ 1.15
SIRPB1O00241 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SIRPB1O00241 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
SIRPB1O00241 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SIRPB1O00241 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SIRPB1O00241 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SIRPB1O00241 AL391121.1-201ENST00000607967 1349 ntBASIC22.23■■□□□ 1.15
SIRPB1O00241 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.22■■□□□ 1.15
SIRPB1O00241 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.21■■□□□ 1.15
SIRPB1O00241 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
SIRPB1O00241 CAHM-201ENST00000604200 896 ntBASIC22.2■■□□□ 1.14
SIRPB1O00241 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIRPB1O00241 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
SIRPB1O00241 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
SIRPB1O00241 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SIRPB1O00241 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.18■■□□□ 1.14
SIRPB1O00241 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
SIRPB1O00241 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIRPB1O00241 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIRPB1O00241 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIRPB1O00241 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SIRPB1O00241 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SIRPB1O00241 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIRPB1O00241 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SIRPB1O00241 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SIRPB1O00241 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SIRPB1O00241 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SIRPB1O00241 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SIRPB1O00241 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SIRPB1O00241 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SIRPB1O00241 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.15■■□□□ 1.14
SIRPB1O00241 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SIRPB1O00241 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
SIRPB1O00241 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
SIRPB1O00241 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
SIRPB1O00241 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SIRPB1O00241 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.13■■□□□ 1.13
SIRPB1O00241 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms